RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 EHD3Q9NZN3 535 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 COG5Q9UP83 839 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 MRPS17Q9Y2R5 130 aaKnown RBP11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 AFTPHQ6ULP2 937 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 SYT15Q9BQS2 421 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 ZSWIM1Q9BR11 485 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 NKIRAS2Q9NYR9 191 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 CCNYL3P0C7X3 344 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 ISCUQ9H1K1 167 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 IFT46Q9NQC8 304 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 QSOX1O00391 747 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 PLEKP08567 350 aaPredicted RBP11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 ZNF483Q8TF39 744 aaPredicted RBP11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 AP2M1Q96CW1 435 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 FNDC11Q9BVV2 318 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 CROTQ9UKG9 612 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 A0A0J9YVX5 310 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 NUAK1O60285 661 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 ALPPL2P10696 532 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 HSD3B1P14060 373 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 AMER2Q8N7J2 671 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 ELMO1Q92556 727 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 DHRS1Q96LJ7 313 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 TRPS1Q9UHF7 1281 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 ENO4A6NNW6 628 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 JCHAINP01591 159 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 GNSP15586 552 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 TRIM40Q6P9F5 258 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 FIP1L1Q6UN15 594 aaKnown RBP11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 FBXO16Q8IX29 292 aaPredicted RBP11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 TSEN15Q8WW01 171 aaKnown RBP11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 OR8D1Q8WZ84 308 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 DNAJC16Q9Y2G8 782 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 WASHC1A8K0Z3 465 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 WASH3PC4AMC7 463 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 PGK1P00558 417 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 FAM58BPP0C7Q3 252 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 PPM1AP35813 382 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 AP3S2P59780 193 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 RAPSNQ13702 412 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 ZNF470Q6ECI4 717 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 WASH2PQ6VEQ5 465 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 SNRNP27Q8WVK2 155 aaKnown RBP11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 ZNF286BP0CG31 522 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 SYT12Q8IV01 421 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 KLRC1P26715 233 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 AP5B1Q2VPB7 878 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 RTL4Q6ZR62 310 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 METTL6Q8TCB7 284 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 ME2P23368 584 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 RFTN2Q52LD8 501 aaPredicted RBP11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 SNCAIPQ9Y6H5 919 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 C8orf59Q8N0T1 100 aaPredicted RBP11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 AIFM2Q9BRQ8 373 aa11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 RSL24D1Q9UHA3 163 aaKnown RBP11.34□□□□□ -0.59
PTCHD1-201ENST00000379361 HAT1O14929 419 aa11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 CDH17Q12864 832 aa11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 FAM91A1Q658Y4 838 aa11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 GJD3Q8N144 294 aa11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 CPA6Q8N4T0 437 aa11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 LRRC70Q7Z2Q7 622 aa11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 PACS2Q86VP3 889 aa11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 CDK7P50613 346 aa11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 PRKAG1P54619 331 aa11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 PGBD2Q6P3X8 592 aa11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 FBXO36Q8NEA4 188 aa11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 PTCD2Q8WV60 388 aaKnown RBP11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 FTHL17Q9BXU8 183 aa11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 SMURF1Q9HCE7 757 aa11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 DNMT3LQ9UJW3 386 aa11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 CATP04040 527 aaKnown RBP11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 OR2L3Q8NG85 312 aa11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 CD101Q93033 1021 aa11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 TRNT1Q96Q11 434 aaKnown RBP11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 SMPD4Q9NXE4 827 aa11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 TNFAIP8O95379 198 aa11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 POLD2P49005 469 aa11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 STK4Q13043 487 aa11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 TBC1D16Q8TBP0 767 aa11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 ERLEC1Q96DZ1 483 aa11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 NYAP2Q9P242 653 aa11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 H0YJX3 145 aa11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 QPRTQ15274 297 aa11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 ATP13A5Q4VNC0 1218 aa11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 PHC3Q8NDX5 983 aa11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 DNERQ8NFT8 737 aa11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 TMEM39BQ9GZU3 492 aa11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 TRHDEQ9UKU6 1024 aa11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 HACD1B0YJ81 288 aa11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 CHKBQ9Y259 395 aa11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 DHRS7Q9Y394 339 aa11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 CLTCQ00610 1675 aaKnown RBP11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 CPS1P31327 1500 aa11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 DNTTP04053 509 aa11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 SRGNP10124 158 aa11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 ZNF37AP17032 561 aaPredicted RBP11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 CDC42EP5Q6NZY7 148 aa11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 DNAJC14Q6Y2X3 702 aaPredicted RBP11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 SLC26A11Q86WA9 606 aa11.33□□□□□ -0.6
PTCHD1-201ENST00000379361 A0A1W2PQJ5 194 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms