RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 BLOC1S4Q9NUP1 217 aa11.9□□□□□ -0.5
NPHP4-202ENST00000378161 RDH8Q9NYR8 311 aa11.9□□□□□ -0.5
NPHP4-202ENST00000378161 MAU2Q9Y6X3 613 aa11.9□□□□□ -0.5
NPHP4-202ENST00000378161 A0A1W2PPM1 405 aa11.9□□□□□ -0.5
NPHP4-202ENST00000378161 CCDC78A2IDD5 438 aa11.9□□□□□ -0.5
NPHP4-202ENST00000378161 TLR3O15455 904 aaKnown RBP11.9□□□□□ -0.5
NPHP4-202ENST00000378161 FMO4P31512 558 aa11.9□□□□□ -0.5
NPHP4-202ENST00000378161 PRIM2P49643 509 aa11.9□□□□□ -0.5
NPHP4-202ENST00000378161 SLC18A1P54219 525 aa11.9□□□□□ -0.5
NPHP4-202ENST00000378161 NFIXQ14938 502 aa11.9□□□□□ -0.5
NPHP4-202ENST00000378161 EPC2Q52LR7 807 aa11.9□□□□□ -0.5
NPHP4-202ENST00000378161 NDUFAF5Q5TEU4 345 aa11.9□□□□□ -0.5
NPHP4-202ENST00000378161 C15orf52Q6ZUT6 534 aaKnown RBP11.9□□□□□ -0.5
NPHP4-202ENST00000378161 SCUBE3Q8IX30 993 aa11.9□□□□□ -0.5
NPHP4-202ENST00000378161 NIM1KQ8IY84 436 aa11.9□□□□□ -0.5
NPHP4-202ENST00000378161 KCTD6Q8NC69 237 aa11.9□□□□□ -0.5
NPHP4-202ENST00000378161 EPS8L1Q8TE68 723 aa11.9□□□□□ -0.5
NPHP4-202ENST00000378161 ATG4AQ8WYN0 398 aa11.9□□□□□ -0.5
NPHP4-202ENST00000378161 ERVK-5Q9HDB9 667 aa11.9□□□□□ -0.5
NPHP4-202ENST00000378161 RIC8BQ9NVN3 520 aa11.9□□□□□ -0.5
NPHP4-202ENST00000378161 NXF1Q9UBU9 619 aaKnown RBP11.9□□□□□ -0.5
NPHP4-202ENST00000378161 TRAF6Q9Y4K3 522 aa11.9□□□□□ -0.5
NPHP4-202ENST00000378161 AKAP12Q02952 1782 aa11.9□□□□□ -0.5
NPHP4-202ENST00000378161 PSAPP07602 524 aa11.9□□□□□ -0.51
NPHP4-202ENST00000378161 FCGR1AP12314 374 aa11.9□□□□□ -0.51
NPHP4-202ENST00000378161 HK2P52789 917 aa11.9□□□□□ -0.51
NPHP4-202ENST00000378161 ENPEPQ07075 957 aa11.9□□□□□ -0.51
NPHP4-202ENST00000378161 FUT2Q10981 343 aa11.9□□□□□ -0.51
NPHP4-202ENST00000378161 PPP1R3AQ16821 1122 aa11.9□□□□□ -0.51
NPHP4-202ENST00000378161 MPP7Q5T2T1 576 aa11.9□□□□□ -0.51
NPHP4-202ENST00000378161 GJB7Q6PEY0 223 aa11.9□□□□□ -0.51
NPHP4-202ENST00000378161 TBC1D21Q8IYX1 336 aa11.9□□□□□ -0.51
NPHP4-202ENST00000378161 TTLQ8NG68 377 aa11.9□□□□□ -0.51
NPHP4-202ENST00000378161 PPP1R16BQ96T49 567 aa11.9□□□□□ -0.51
NPHP4-202ENST00000378161 TIGARQ9NQ88 270 aa11.9□□□□□ -0.51
NPHP4-202ENST00000378161 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.9□□□□□ -0.51
NPHP4-202ENST00000378161 PFDN2Q9UHV9 154 aa11.9□□□□□ -0.51
NPHP4-202ENST00000378161 HEATR9A2RTY3 570 aa11.89□□□□□ -0.51
NPHP4-202ENST00000378161 ZBTB39O15060 712 aa11.89□□□□□ -0.51
NPHP4-202ENST00000378161 TGM2P21980 687 aa11.89□□□□□ -0.51
NPHP4-202ENST00000378161 ALAS2P22557 587 aa11.89□□□□□ -0.51
NPHP4-202ENST00000378161 CASP3P42574 277 aa11.89□□□□□ -0.51
NPHP4-202ENST00000378161 SURF1Q15526 300 aa11.89□□□□□ -0.51
NPHP4-202ENST00000378161 DALRD3Q5D0E6 543 aaKnown RBP11.89□□□□□ -0.51
NPHP4-202ENST00000378161 MTX3Q5HYI7 312 aa11.89□□□□□ -0.51
NPHP4-202ENST00000378161 MIIPQ5JXC2 388 aa11.89□□□□□ -0.51
NPHP4-202ENST00000378161 TMEM270Q6UE05 265 aa11.89□□□□□ -0.51
NPHP4-202ENST00000378161 LURAP1LQ8IV03 231 aa11.89□□□□□ -0.51
NPHP4-202ENST00000378161 SEC14L1Q92503 715 aa11.89□□□□□ -0.51
NPHP4-202ENST00000378161 GTF2H4Q92759 462 aa11.89□□□□□ -0.51
NPHP4-202ENST00000378161 DNAJC28Q9NX36 388 aa11.89□□□□□ -0.51
NPHP4-202ENST00000378161 XPO7Q9UIA9 1087 aaKnown RBP11.89□□□□□ -0.51
NPHP4-202ENST00000378161 EIF3LQ9Y262 564 aaKnown RBP11.89□□□□□ -0.51
NPHP4-202ENST00000378161 ERP29P30040 261 aaKnown RBP11.89□□□□□ -0.51
NPHP4-202ENST00000378161 CD83Q01151 205 aa11.89□□□□□ -0.51
NPHP4-202ENST00000378161 ALDH6A1Q02252 535 aaKnown RBP11.89□□□□□ -0.51
NPHP4-202ENST00000378161 EPS8Q12929 822 aa11.89□□□□□ -0.51
NPHP4-202ENST00000378161 POU6F1Q14863 301 aa11.89□□□□□ -0.51
NPHP4-202ENST00000378161 TTC39BQ5VTQ0 682 aaPredicted RBP11.89□□□□□ -0.51
NPHP4-202ENST00000378161 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.89□□□□□ -0.51
NPHP4-202ENST00000378161 ZNF517Q6ZMY9 492 aaPredicted RBP11.89□□□□□ -0.51
NPHP4-202ENST00000378161 DSG4Q86SJ6 1040 aa11.89□□□□□ -0.51
NPHP4-202ENST00000378161 SH3YL1Q96HL8 342 aaPredicted RBP11.89□□□□□ -0.51
NPHP4-202ENST00000378161 MND1Q9BWT6 205 aa11.89□□□□□ -0.51
NPHP4-202ENST00000378161 THAP2Q9H0W7 228 aa11.89□□□□□ -0.51
NPHP4-202ENST00000378161 SYNDIG1Q9H7V2 258 aa11.89□□□□□ -0.51
NPHP4-202ENST00000378161 CAB39LQ9H9S4 337 aa11.89□□□□□ -0.51
NPHP4-202ENST00000378161 C17orf75Q9HAS0 396 aa11.89□□□□□ -0.51
NPHP4-202ENST00000378161 KIAA1522Q9P206 1035 aaPredicted RBP11.89□□□□□ -0.51
NPHP4-202ENST00000378161 OGDHLQ9ULD0 1010 aa11.89□□□□□ -0.51
NPHP4-202ENST00000378161 ZNF175Q9Y473 711 aa11.89□□□□□ -0.51
NPHP4-202ENST00000378161 FAM208AQ9UK61 1670 aaKnown RBP11.89□□□□□ -0.51
NPHP4-202ENST00000378161 SLIT3O75094 1523 aa11.89□□□□□ -0.51
NPHP4-202ENST00000378161 ZNF536O15090 1300 aa11.89□□□□□ -0.51
NPHP4-202ENST00000378161 TRAV20A0A0B4J274 112 aa11.89□□□□□ -0.51
NPHP4-202ENST00000378161 MED24O75448 989 aa11.89□□□□□ -0.51
NPHP4-202ENST00000378161 SRP72O76094 671 aaKnown RBP11.89□□□□□ -0.51
NPHP4-202ENST00000378161 EGFRP00533 1210 aa11.89□□□□□ -0.51
NPHP4-202ENST00000378161 ITGA2P17301 1181 aa11.89□□□□□ -0.51
NPHP4-202ENST00000378161 CD58P19256 250 aa11.89□□□□□ -0.51
NPHP4-202ENST00000378161 TBXAS1P24557 533 aaPredicted RBP11.89□□□□□ -0.51
NPHP4-202ENST00000378161 HLA-FP30511 346 aa11.89□□□□□ -0.51
NPHP4-202ENST00000378161 SFNP31947 248 aa11.89□□□□□ -0.51
NPHP4-202ENST00000378161 RGS7P49802 495 aa11.89□□□□□ -0.51
NPHP4-202ENST00000378161 CYP4F8P98187 520 aa11.89□□□□□ -0.51
NPHP4-202ENST00000378161 SELPLGQ14242 412 aa11.89□□□□□ -0.51
NPHP4-202ENST00000378161 CYP2R1Q6VVX0 501 aa11.89□□□□□ -0.51
NPHP4-202ENST00000378161 SNX20Q7Z614 316 aa11.89□□□□□ -0.51
NPHP4-202ENST00000378161 CLYBLQ8N0X4 340 aa11.89□□□□□ -0.51
NPHP4-202ENST00000378161 WDR41Q9HAD4 459 aa11.89□□□□□ -0.51
NPHP4-202ENST00000378161 NSMCE4AQ9NXX6 385 aa11.89□□□□□ -0.51
NPHP4-202ENST00000378161 GLTPQ9NZD2 209 aa11.89□□□□□ -0.51
NPHP4-202ENST00000378161 HSPBP1Q9NZL4 362 aa11.89□□□□□ -0.51
NPHP4-202ENST00000378161 PRKAG2Q9UGJ0 569 aa11.89□□□□□ -0.51
NPHP4-202ENST00000378161 MYH8P13535 1937 aa11.89□□□□□ -0.51
NPHP4-202ENST00000378161 C2orf74A8MZ97 194 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 PI4K2BG5E9Z4 385 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 KPNA6O60684 536 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 OR2B3O76000 313 aa11.88□□□□□ -0.51
NPHP4-202ENST00000378161 NDUFB10O96000 172 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms