RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 NETO2Q8NC67 525 aa15.85■□□□□ 0.13
CSNK1A1-202ENST00000377843 ADPGKQ9BRR6 497 aa15.85■□□□□ 0.13
CSNK1A1-202ENST00000377843 LHPPQ9H008 270 aa15.85■□□□□ 0.13
CSNK1A1-202ENST00000377843 LHX5Q9H2C1 402 aa15.85■□□□□ 0.13
CSNK1A1-202ENST00000377843 ADAMTS10Q9H324 1103 aa15.85■□□□□ 0.13
CSNK1A1-202ENST00000377843 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.85■□□□□ 0.131e-9■■□□□ 12.5
CSNK1A1-202ENST00000377843 MFHAS1Q9Y4C4 1052 aa15.85■□□□□ 0.13
CSNK1A1-202ENST00000377843 PTPRFP10586 1907 aa15.85■□□□□ 0.13
CSNK1A1-202ENST00000377843 A0A1W2PQ67 120 aa15.85■□□□□ 0.13
CSNK1A1-202ENST00000377843 SDHDO14521 159 aa15.85■□□□□ 0.13
CSNK1A1-202ENST00000377843 PRPSAP2O60256 369 aa15.85■□□□□ 0.13
CSNK1A1-202ENST00000377843 PGAM1P18669 254 aa15.85■□□□□ 0.13
CSNK1A1-202ENST00000377843 RAD23AP54725 363 aa15.85■□□□□ 0.13
CSNK1A1-202ENST00000377843 TGFB2P61812 414 aa15.85■□□□□ 0.13
CSNK1A1-202ENST00000377843 GTF2IRD2BQ6EKJ0 949 aa15.85■□□□□ 0.13
CSNK1A1-202ENST00000377843 GTF2IRD2Q86UP8 949 aa15.85■□□□□ 0.13
CSNK1A1-202ENST00000377843 PACRGLQ8N7B6 248 aa15.85■□□□□ 0.13
CSNK1A1-202ENST00000377843 ZMAT2Q96NC0 199 aaKnown RBP15.85■□□□□ 0.13
CSNK1A1-202ENST00000377843 RBBP8Q99708 897 aa15.85■□□□□ 0.13
CSNK1A1-202ENST00000377843 EFHD1Q9BUP0 239 aa15.85■□□□□ 0.13
CSNK1A1-202ENST00000377843 ACE2Q9BYF1 805 aaPredicted RBP15.85■□□□□ 0.13
CSNK1A1-202ENST00000377843 SPAG4Q9NPE6 437 aa15.85■□□□□ 0.13
CSNK1A1-202ENST00000377843 IFT80Q9P2H3 777 aaPredicted RBP15.85■□□□□ 0.13
CSNK1A1-202ENST00000377843 TXNDC16Q9P2K2 825 aa15.85■□□□□ 0.13
CSNK1A1-202ENST00000377843 ANKMY1Q9P2S6 941 aa15.85■□□□□ 0.13
CSNK1A1-202ENST00000377843 HMGXB4Q9UGU5 601 aa15.85■□□□□ 0.13
CSNK1A1-202ENST00000377843 SEPT3Q9UH03 358 aa15.85■□□□□ 0.13
CSNK1A1-202ENST00000377843 RNF103-CHMP3A0A140T963 221 aa15.84■□□□□ 0.13
CSNK1A1-202ENST00000377843 CLDN25C9JDP6 229 aa15.84■□□□□ 0.13
CSNK1A1-202ENST00000377843 HMGB2P26583 209 aaKnown RBP15.84■□□□□ 0.13
CSNK1A1-202ENST00000377843 ELK4P28324 431 aa15.84■□□□□ 0.13
CSNK1A1-202ENST00000377843 CDH8P55286 799 aa15.84■□□□□ 0.13
CSNK1A1-202ENST00000377843 ATP6AP1Q15904 470 aa15.84■□□□□ 0.13
CSNK1A1-202ENST00000377843 CYBRD1Q53TN4 286 aa15.84■□□□□ 0.13
CSNK1A1-202ENST00000377843 TBCELQ5QJ74 424 aa15.84■□□□□ 0.13
CSNK1A1-202ENST00000377843 STRA8Q7Z7C7 330 aa15.84■□□□□ 0.13
CSNK1A1-202ENST00000377843 DHFR2Q86XF0 187 aa15.84■□□□□ 0.13
CSNK1A1-202ENST00000377843 CMTR2Q8IYT2 770 aaKnown RBP15.84■□□□□ 0.13
CSNK1A1-202ENST00000377843 PELI3Q8N2H9 469 aa15.84■□□□□ 0.13
CSNK1A1-202ENST00000377843 KDM1BQ8NB78 822 aa15.84■□□□□ 0.13
CSNK1A1-202ENST00000377843 OR2T34Q8NGX1 318 aa15.84■□□□□ 0.13
CSNK1A1-202ENST00000377843 OR2T3Q8NH03 318 aa15.84■□□□□ 0.13
CSNK1A1-202ENST00000377843 GABPB2Q8TAK5 448 aaPredicted RBP15.84■□□□□ 0.13
CSNK1A1-202ENST00000377843 ZC3H15Q8WU90 426 aaKnown RBP15.84■□□□□ 0.13
CSNK1A1-202ENST00000377843 SEPT8Q92599 483 aa15.84■□□□□ 0.13
CSNK1A1-202ENST00000377843 TMEM143Q96AN5 459 aa15.84■□□□□ 0.13
CSNK1A1-202ENST00000377843 CNDP2Q96KP4 475 aaKnown RBP15.84■□□□□ 0.13
CSNK1A1-202ENST00000377843 TWNKQ96RR1 684 aa15.84■□□□□ 0.13
CSNK1A1-202ENST00000377843 CEP41Q9BYV8 373 aa15.84■□□□□ 0.13
CSNK1A1-202ENST00000377843 VPS33BQ9H267 617 aa15.84■□□□□ 0.13
CSNK1A1-202ENST00000377843 POLE4Q9NR33 117 aa15.84■□□□□ 0.13
CSNK1A1-202ENST00000377843 AGPAT4Q9NRZ5 378 aa15.84■□□□□ 0.13
CSNK1A1-202ENST00000377843 TMEM181Q9P2C4 612 aa15.84■□□□□ 0.13
CSNK1A1-202ENST00000377843 C2CD4BA6NLJ0 364 aa15.84■□□□□ 0.13
CSNK1A1-202ENST00000377843 TOR1BO14657 336 aa15.84■□□□□ 0.13
CSNK1A1-202ENST00000377843 EI24O14681 340 aa15.84■□□□□ 0.13
CSNK1A1-202ENST00000377843 PDGFRAP16234 1089 aa15.84■□□□□ 0.13
CSNK1A1-202ENST00000377843 GLRBP48167 497 aa15.84■□□□□ 0.13
CSNK1A1-202ENST00000377843 HLCSP50747 726 aa15.84■□□□□ 0.13
CSNK1A1-202ENST00000377843 PRKAA1Q13131 559 aa15.84■□□□□ 0.13
CSNK1A1-202ENST00000377843 CARTPTQ16568 116 aa15.84■□□□□ 0.13
CSNK1A1-202ENST00000377843 FAM209AQ5JX71 171 aa15.84■□□□□ 0.13
CSNK1A1-202ENST00000377843 NAT16Q8N8M0 369 aa15.84■□□□□ 0.13
CSNK1A1-202ENST00000377843 CERS2Q96G23 380 aa15.84■□□□□ 0.13
CSNK1A1-202ENST00000377843 TUBA1CQ9BQE3 449 aa15.84■□□□□ 0.13
CSNK1A1-202ENST00000377843 SEZ6LQ9BYH1 1024 aa15.84■□□□□ 0.13
CSNK1A1-202ENST00000377843 RAD21L1Q9H4I0 556 aa15.84■□□□□ 0.13
CSNK1A1-202ENST00000377843 GPN2Q9H9Y4 310 aaPredicted RBP15.84■□□□□ 0.13
CSNK1A1-202ENST00000377843 AKIP1Q9NQ31 210 aa15.84■□□□□ 0.13
CSNK1A1-202ENST00000377843 CCM2LQ9NUG4 571 aaPredicted RBP15.84■□□□□ 0.13
CSNK1A1-202ENST00000377843 CCDC167Q9P0B6 97 aa15.84■□□□□ 0.13
CSNK1A1-202ENST00000377843 TCEAL9Q9UHQ7 104 aa15.84■□□□□ 0.13
CSNK1A1-202ENST00000377843 TMA7Q9Y2S6 64 aaKnown RBP15.84■□□□□ 0.13
CSNK1A1-202ENST00000377843 QSER1Q2KHR3 1735 aa15.84■□□□□ 0.13
CSNK1A1-202ENST00000377843 SYNCRIPO60506 623 aaKnown RBP15.83■□□□□ 0.13
CSNK1A1-202ENST00000377843 MYCLP12524 364 aaPredicted RBP15.83■□□□□ 0.13
CSNK1A1-202ENST00000377843 GPD1P21695 349 aa15.83■□□□□ 0.13
CSNK1A1-202ENST00000377843 MZF1P28698 734 aaPredicted RBP15.83■□□□□ 0.13
CSNK1A1-202ENST00000377843 OXTRP30559 389 aa15.83■□□□□ 0.13
CSNK1A1-202ENST00000377843 BMPR1AP36894 532 aa15.83■□□□□ 0.13
CSNK1A1-202ENST00000377843 NR4A2P43354 598 aa15.83■□□□□ 0.13
CSNK1A1-202ENST00000377843 JAK3P52333 1124 aa15.83■□□□□ 0.13
CSNK1A1-202ENST00000377843 SLC7A2P52569 658 aa15.83■□□□□ 0.13
CSNK1A1-202ENST00000377843 HNRNPFP52597 415 aaKnown RBP15.83■□□□□ 0.13
CSNK1A1-202ENST00000377843 LIMK2P53671 638 aa15.83■□□□□ 0.13
CSNK1A1-202ENST00000377843 YBX1P67809 324 aaKnown RBP15.83■□□□□ 0.13
CSNK1A1-202ENST00000377843 GRTP1Q5TC63 336 aa15.83■□□□□ 0.13
CSNK1A1-202ENST00000377843 LIPMQ5VYY2 423 aa15.83■□□□□ 0.13
CSNK1A1-202ENST00000377843 ANKRD13BQ86YJ7 626 aa15.83■□□□□ 0.13
CSNK1A1-202ENST00000377843 CDKL3Q8IVW4 592 aaPredicted RBP15.83■□□□□ 0.13
CSNK1A1-202ENST00000377843 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.83■□□□□ 0.13
CSNK1A1-202ENST00000377843 URGCPQ8TCY9 931 aa15.83■□□□□ 0.13
CSNK1A1-202ENST00000377843 CLEC4DQ8WXI8 215 aa15.83■□□□□ 0.13
CSNK1A1-202ENST00000377843 LRCH3Q96II8 777 aa15.83■□□□□ 0.13
CSNK1A1-202ENST00000377843 TAAR1Q96RJ0 339 aa15.83■□□□□ 0.13
CSNK1A1-202ENST00000377843 CPNE1Q99829 537 aa15.83■□□□□ 0.13
CSNK1A1-202ENST00000377843 ARPC5LQ9BPX5 153 aa15.83■□□□□ 0.13
CSNK1A1-202ENST00000377843 CNPY3Q9BT09 278 aa15.83■□□□□ 0.13
CSNK1A1-202ENST00000377843 CEP44Q9C0F1 390 aa15.83■□□□□ 0.13
CSNK1A1-202ENST00000377843 LRRC37AA6NMS7 1700 aa15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms