RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 TRIM67Q6ZTA4 783 aa13.09□□□□□ -0.31
USP11-204ENST00000377107 C2orf69Q8N8R5 385 aa13.09□□□□□ -0.31
USP11-204ENST00000377107 OR52K2Q8NGK3 314 aa13.09□□□□□ -0.31
USP11-204ENST00000377107 ZNF483Q8TF39 744 aaPredicted RBP13.09□□□□□ -0.31
USP11-204ENST00000377107 HEXDCQ8WVB3 486 aa13.09□□□□□ -0.31
USP11-204ENST00000377107 MS4A4AQ96JQ5 239 aa13.09□□□□□ -0.31
USP11-204ENST00000377107 GORASP1Q9BQQ3 440 aa13.09□□□□□ -0.31
USP11-204ENST00000377107 PCDHAC1Q9H158 963 aa13.09□□□□□ -0.31
USP11-204ENST00000377107 RHOJQ9H4E5 214 aa13.09□□□□□ -0.31
USP11-204ENST00000377107 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.09□□□□□ -0.31
USP11-204ENST00000377107 MID2Q9UJV3 735 aa13.09□□□□□ -0.31
USP11-204ENST00000377107 FBXO5Q9UKT4 447 aa13.09□□□□□ -0.31
USP11-204ENST00000377107 SORCS3Q9UPU3 1222 aa13.09□□□□□ -0.31
USP11-204ENST00000377107 UBA6A0AVT1 1052 aaPredicted RBP13.08□□□□□ -0.32
USP11-204ENST00000377107 GOLGA8CPA6NN73 597 aa13.08□□□□□ -0.32
USP11-204ENST00000377107 MTSS1O43312 755 aa13.08□□□□□ -0.32
USP11-204ENST00000377107 TBX18O95935 607 aa13.08□□□□□ -0.32
USP11-204ENST00000377107 VCLP18206 1134 aa13.08□□□□□ -0.32
USP11-204ENST00000377107 GABRB3P28472 473 aa13.08□□□□□ -0.32
USP11-204ENST00000377107 TSPY1Q01534 308 aa13.08□□□□□ -0.32
USP11-204ENST00000377107 PRKAA1Q13131 559 aa13.08□□□□□ -0.32
USP11-204ENST00000377107 SLC39A12Q504Y0 691 aa13.08□□□□□ -0.32
USP11-204ENST00000377107 PKN3Q6P5Z2 889 aa13.08□□□□□ -0.32
USP11-204ENST00000377107 RNF111Q6ZNA4 994 aa13.08□□□□□ -0.32
USP11-204ENST00000377107 IFNEQ86WN2 208 aa13.08□□□□□ -0.32
USP11-204ENST00000377107 SLC2A13Q96QE2 648 aa13.08□□□□□ -0.32
USP11-204ENST00000377107 ALG9Q9H6U8 611 aa13.08□□□□□ -0.32
USP11-204ENST00000377107 SP110Q9HB58 689 aa13.08□□□□□ -0.32
USP11-204ENST00000377107 IPO11Q9UI26 975 aaKnown RBP13.08□□□□□ -0.32
USP11-204ENST00000377107 AAR2Q9Y312 384 aaKnown RBP13.08□□□□□ -0.32
USP11-204ENST00000377107 COMMD10Q9Y6G5 202 aa13.08□□□□□ -0.32
USP11-204ENST00000377107 PAPPA2Q9BXP8 1791 aa13.08□□□□□ -0.32
USP11-204ENST00000377107 DOCK3Q8IZD9 2030 aa13.08□□□□□ -0.32
USP11-204ENST00000377107 ANK1P16157 1881 aa13.08□□□□□ -0.32
USP11-204ENST00000377107 RGSL1A5PLK6 1076 aa13.08□□□□□ -0.32
USP11-204ENST00000377107 HLA-DQB2P05538 268 aa13.08□□□□□ -0.32
USP11-204ENST00000377107 SLC35E2BP0CK96 405 aa13.08□□□□□ -0.32
USP11-204ENST00000377107 CCR1P32246 355 aa13.08□□□□□ -0.32
USP11-204ENST00000377107 CD151P48509 253 aa13.08□□□□□ -0.32
USP11-204ENST00000377107 RAB10P61026 200 aa13.08□□□□□ -0.32
USP11-204ENST00000377107 FOLH1Q04609 750 aa13.08□□□□□ -0.32
USP11-204ENST00000377107 PCID2Q5JVF3 399 aa13.08□□□□□ -0.32
USP11-204ENST00000377107 LINC00523Q86TU6 105 aa13.08□□□□□ -0.32
USP11-204ENST00000377107 LRRTM3Q86VH5 581 aa13.08□□□□□ -0.32
USP11-204ENST00000377107 SLC39A3Q9BRY0 314 aa13.08□□□□□ -0.32
USP11-204ENST00000377107 AGO3Q9H9G7 860 aaKnown RBP13.08□□□□□ -0.32
USP11-204ENST00000377107 GLOD4Q9HC38 313 aa13.08□□□□□ -0.32
USP11-204ENST00000377107 DMAP1Q9NPF5 467 aaPredicted RBP13.08□□□□□ -0.32
USP11-204ENST00000377107 MTF2Q9Y483 593 aaPredicted RBP13.08□□□□□ -0.32
USP11-204ENST00000377107 SLC4A7Q9Y6M7 1214 aa13.08□□□□□ -0.32
USP11-204ENST00000377107 PRRC2BQ5JSZ5 2229 aaKnown RBP13.08□□□□□ -0.32
USP11-204ENST00000377107 ODC1P11926 461 aa13.08□□□□□ -0.32
USP11-204ENST00000377107 PMLP29590 882 aa13.08□□□□□ -0.32
USP11-204ENST00000377107 HUNKP57058 714 aa13.08□□□□□ -0.32
USP11-204ENST00000377107 NAB1Q13506 487 aa13.08□□□□□ -0.32
USP11-204ENST00000377107 PTK2BQ14289 1009 aa13.08□□□□□ -0.32
USP11-204ENST00000377107 PPP1R3AQ16821 1122 aa13.08□□□□□ -0.32
USP11-204ENST00000377107 FAM83EQ2M2I3 478 aa13.08□□□□□ -0.32
USP11-204ENST00000377107 C14orf80Q86SX3 495 aa13.08□□□□□ -0.32
USP11-204ENST00000377107 DDIASQ8IXT1 998 aa13.08□□□□□ -0.32
USP11-204ENST00000377107 ACTRT2Q8TDY3 377 aa13.08□□□□□ -0.32
USP11-204ENST00000377107 CASP10Q92851 521 aa13.08□□□□□ -0.32
USP11-204ENST00000377107 ADAM2Q99965 735 aa13.08□□□□□ -0.32
USP11-204ENST00000377107 GIMAP2Q9UG22 337 aa13.08□□□□□ -0.32
USP11-204ENST00000377107 ADAM28Q9UKQ2 775 aa13.08□□□□□ -0.32
USP11-204ENST00000377107 KCTD3Q9Y597 815 aa13.08□□□□□ -0.32
USP11-204ENST00000377107 MAGEB16A2A368 324 aa13.07□□□□□ -0.32
USP11-204ENST00000377107 NCF1BA6NI72 391 aaPredicted RBP13.07□□□□□ -0.32
USP11-204ENST00000377107 NCF1CA8MVU1 366 aaPredicted RBP13.07□□□□□ -0.32
USP11-204ENST00000377107 ANXA9O76027 345 aa13.07□□□□□ -0.32
USP11-204ENST00000377107 NCF1P14598 390 aaPredicted RBP13.07□□□□□ -0.32
USP11-204ENST00000377107 PAMP19021 973 aa13.07□□□□□ -0.32
USP11-204ENST00000377107 GPR15P49685 360 aa13.07□□□□□ -0.32
USP11-204ENST00000377107 WNT3AP56704 352 aa13.07□□□□□ -0.32
USP11-204ENST00000377107 PDK3Q15120 406 aa13.07□□□□□ -0.32
USP11-204ENST00000377107 LDLRAD1Q5T700 205 aa13.07□□□□□ -0.32
USP11-204ENST00000377107 OR52E8Q6IFG1 317 aa13.07□□□□□ -0.32
USP11-204ENST00000377107 C16orf89Q6UX73 402 aa13.07□□□□□ -0.32
USP11-204ENST00000377107 DIS3LQ8TF46 1054 aaKnown RBP13.07□□□□□ -0.32
USP11-204ENST00000377107 PDCD6IPQ8WUM4 868 aaKnown RBP13.07□□□□□ -0.32
USP11-204ENST00000377107 SGIP1Q9BQI5 828 aa13.07□□□□□ -0.32
USP11-204ENST00000377107 SPON2Q9BUD6 331 aa13.07□□□□□ -0.32
USP11-204ENST00000377107 EFCAB1Q9HAE3 211 aa13.07□□□□□ -0.32
USP11-204ENST00000377107 DSEQ9UL01 958 aa13.07□□□□□ -0.32
USP11-204ENST00000377107 V9GYQ6 96 aa13.07□□□□□ -0.32
USP11-204ENST00000377107 ZNF487B1APH4 448 aa13.07□□□□□ -0.32
USP11-204ENST00000377107 CRCPO75575 148 aa13.07□□□□□ -0.32
USP11-204ENST00000377107 GSTT1P30711 240 aa13.07□□□□□ -0.32
USP11-204ENST00000377107 GRK4P32298 578 aa13.07□□□□□ -0.32
USP11-204ENST00000377107 OR1G1P47890 313 aa13.07□□□□□ -0.32
USP11-204ENST00000377107 GALNT2Q10471 571 aa13.07□□□□□ -0.32
USP11-204ENST00000377107 MAP2K5Q13163 448 aa13.07□□□□□ -0.32
USP11-204ENST00000377107 RPS6KA2Q15349 733 aa13.07□□□□□ -0.32
USP11-204ENST00000377107 UGP2Q16851 508 aa13.07□□□□□ -0.32
USP11-204ENST00000377107 TMCO4Q5TGY1 634 aa13.07□□□□□ -0.32
USP11-204ENST00000377107 OR9I1Q8NGQ6 314 aa13.07□□□□□ -0.32
USP11-204ENST00000377107 EME1Q96AY2 570 aa13.07□□□□□ -0.32
USP11-204ENST00000377107 PPP1R10Q96QC0 940 aaKnown RBP13.07□□□□□ -0.32
USP11-204ENST00000377107 SIKE1Q9BRV8 207 aa13.07□□□□□ -0.32
USP11-204ENST00000377107 CENPKQ9BS16 269 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms