RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 YBX3P16989 372 aaKnown RBP eCLIP16.71■□□□□ 0.27
TRIM39-201ENST00000376656 TRAP1Q12931 704 aaKnown RBP16.71■□□□□ 0.27
TRIM39-201ENST00000376656 KCTD21Q4G0X4 260 aa16.71■□□□□ 0.27
TRIM39-201ENST00000376656 NBPF12Q5TAG4 269 aaPredicted RBP16.71■□□□□ 0.27
TRIM39-201ENST00000376656 TTC33Q6PID6 262 aaPredicted RBP16.71■□□□□ 0.27
TRIM39-201ENST00000376656 CANT1Q8WVQ1 401 aa16.71■□□□□ 0.27
TRIM39-201ENST00000376656 HIPK3Q9H422 1215 aa16.71■□□□□ 0.27
TRIM39-201ENST00000376656 SPAG4Q9NPE6 437 aa16.71■□□□□ 0.27
TRIM39-201ENST00000376656 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.71■□□□□ 0.27
TRIM39-201ENST00000376656 LTBP4Q8N2S1 1624 aa16.71■□□□□ 0.27
TRIM39-201ENST00000376656 TRIM64CA6NLI5 447 aa16.7■□□□□ 0.26
TRIM39-201ENST00000376656 DLGAP1O14490 977 aa16.7■□□□□ 0.26
TRIM39-201ENST00000376656 ARIH2O95376 493 aa16.7■□□□□ 0.26
TRIM39-201ENST00000376656 ETFBP38117 255 aa16.7■□□□□ 0.26
TRIM39-201ENST00000376656 SULT1E1P49888 294 aa16.7■□□□□ 0.26
TRIM39-201ENST00000376656 AMHR2Q16671 573 aa16.7■□□□□ 0.26
TRIM39-201ENST00000376656 PPP1R3AQ16821 1122 aa16.7■□□□□ 0.26
TRIM39-201ENST00000376656 PBXIP1Q96AQ6 731 aa16.7■□□□□ 0.26
TRIM39-201ENST00000376656 NXNL1Q96CM4 212 aa16.7■□□□□ 0.26
TRIM39-201ENST00000376656 DUS3LQ96G46 650 aaKnown RBP16.7■□□□□ 0.26
TRIM39-201ENST00000376656 SLC39A3Q9BRY0 314 aa16.7■□□□□ 0.26
TRIM39-201ENST00000376656 MRPL40Q9NQ50 206 aaKnown RBP16.7■□□□□ 0.26
TRIM39-201ENST00000376656 ZBTB24O43167 697 aaPredicted RBP16.7■□□□□ 0.26
TRIM39-201ENST00000376656 CBFA2T3O75081 653 aa16.7■□□□□ 0.26
TRIM39-201ENST00000376656 STX5Q13190 355 aa16.7■□□□□ 0.26
TRIM39-201ENST00000376656 FASTKQ14296 549 aaKnown RBP16.7■□□□□ 0.26
TRIM39-201ENST00000376656 TGFBIQ15582 683 aa16.7■□□□□ 0.26
TRIM39-201ENST00000376656 CATSPERGQ6ZRH7 1159 aa16.7■□□□□ 0.26
TRIM39-201ENST00000376656 ANKFN1Q8N957 763 aa16.7■□□□□ 0.26
TRIM39-201ENST00000376656 MLPHQ9BV36 600 aaPredicted RBP16.7■□□□□ 0.26
TRIM39-201ENST00000376656 DNAI2Q9GZS0 605 aa16.7■□□□□ 0.26
TRIM39-201ENST00000376656 SARDHQ9UL12 918 aa16.7■□□□□ 0.26
TRIM39-201ENST00000376656 TRPC5OSA6NMA1 111 aa16.7■□□□□ 0.26
TRIM39-201ENST00000376656 UGT1A6P19224 532 aa16.7■□□□□ 0.26
TRIM39-201ENST00000376656 CD247P20963 164 aa16.7■□□□□ 0.26
TRIM39-201ENST00000376656 HMOX2P30519 316 aa16.7■□□□□ 0.26
TRIM39-201ENST00000376656 SLC12A1Q13621 1099 aa16.7■□□□□ 0.26
TRIM39-201ENST00000376656 FRG1Q14331 258 aaKnown RBP16.7■□□□□ 0.26
TRIM39-201ENST00000376656 XKR5Q6UX68 686 aa16.7■□□□□ 0.26
TRIM39-201ENST00000376656 STRADAQ7RTN6 431 aa16.7■□□□□ 0.26
TRIM39-201ENST00000376656 DEFB106AQ8N104 65 aa16.7■□□□□ 0.26
TRIM39-201ENST00000376656 CBR4Q8N4T8 237 aa16.7■□□□□ 0.26
TRIM39-201ENST00000376656 SPPL2BQ8TCT7 592 aa16.7■□□□□ 0.26
TRIM39-201ENST00000376656 THAP11Q96EK4 314 aa16.7■□□□□ 0.26
TRIM39-201ENST00000376656 KIF12Q96FN5 646 aa16.7■□□□□ 0.26
TRIM39-201ENST00000376656 GPR20Q99678 358 aa16.7■□□□□ 0.26
TRIM39-201ENST00000376656 NPLQ9BXD5 320 aaPredicted RBP16.7■□□□□ 0.26
TRIM39-201ENST00000376656 OSBPL2Q9H1P3 480 aa16.7■□□□□ 0.26
TRIM39-201ENST00000376656 RPF2Q9H7B2 306 aaKnown RBP16.7■□□□□ 0.26
TRIM39-201ENST00000376656 TNFRSF12AQ9NP84 129 aa16.7■□□□□ 0.26
TRIM39-201ENST00000376656 TBC1D23Q9NUY8 699 aa16.7■□□□□ 0.26
TRIM39-201ENST00000376656 PRMT7Q9NVM4 692 aaPredicted RBP16.7■□□□□ 0.26
TRIM39-201ENST00000376656 UBP1Q9NZI7 540 aa16.7■□□□□ 0.26
TRIM39-201ENST00000376656 RCOR3Q9P2K3 495 aaPredicted RBP16.7■□□□□ 0.26
TRIM39-201ENST00000376656 CDH7Q9ULB5 785 aa16.7■□□□□ 0.26
TRIM39-201ENST00000376656 NRP1O14786 923 aa16.69■□□□□ 0.26
TRIM39-201ENST00000376656 STAMBPO95630 424 aa16.69■□□□□ 0.26
TRIM39-201ENST00000376656 PGK1P00558 417 aa16.69■□□□□ 0.26
TRIM39-201ENST00000376656 GRIA3P42263 894 aa16.69■□□□□ 0.26
TRIM39-201ENST00000376656 SNX16P57768 344 aa16.69■□□□□ 0.26
TRIM39-201ENST00000376656 TNFAIP2Q03169 654 aa16.69■□□□□ 0.26
TRIM39-201ENST00000376656 CEP97Q8IW35 865 aa16.69■□□□□ 0.26
TRIM39-201ENST00000376656 TTC39CQ8N584 583 aa16.69■□□□□ 0.26
TRIM39-201ENST00000376656 ANKRD52Q8NB46 1076 aa16.69■□□□□ 0.26
TRIM39-201ENST00000376656 COX4I2Q96KJ9 171 aa16.69■□□□□ 0.26
TRIM39-201ENST00000376656 EFHD1Q9BUP0 239 aa16.69■□□□□ 0.26
TRIM39-201ENST00000376656 CXorf21Q9HAI6 301 aa16.69■□□□□ 0.26
TRIM39-201ENST00000376656 TUBA8Q9NY65 449 aaPredicted RBP16.69■□□□□ 0.26
TRIM39-201ENST00000376656 A0A1W2PPW3 197 aa16.69■□□□□ 0.26
TRIM39-201ENST00000376656 SOWAHBA6NEL2 793 aa16.69■□□□□ 0.26
TRIM39-201ENST00000376656 NEMP2A6NFY4 417 aa16.69■□□□□ 0.26
TRIM39-201ENST00000376656 H3BMQ9 156 aa16.69■□□□□ 0.26
TRIM39-201ENST00000376656 GIPC1O14908 333 aa16.69■□□□□ 0.26
TRIM39-201ENST00000376656 COL6A2P12110 1019 aa16.69■□□□□ 0.26
TRIM39-201ENST00000376656 ATP6V1B2P21281 511 aa16.69■□□□□ 0.26
TRIM39-201ENST00000376656 RELAQ04206 551 aa16.69■□□□□ 0.26
TRIM39-201ENST00000376656 CXCL9Q07325 125 aa16.69■□□□□ 0.26
TRIM39-201ENST00000376656 PMS2P3Q13401 168 aa16.69■□□□□ 0.26
TRIM39-201ENST00000376656 GPR107Q5VW38 600 aa16.69■□□□□ 0.26
TRIM39-201ENST00000376656 KCTD11Q693B1 232 aa16.69■□□□□ 0.26
TRIM39-201ENST00000376656 RPS27LQ71UM5 84 aaKnown RBP16.69■□□□□ 0.26
TRIM39-201ENST00000376656 TXNDC5Q8NBS9 432 aaKnown RBP16.69■□□□□ 0.26
TRIM39-201ENST00000376656 OR6B3Q8NGW1 331 aa16.69■□□□□ 0.26
TRIM39-201ENST00000376656 VPS50Q96JG6 964 aa16.69■□□□□ 0.26
TRIM39-201ENST00000376656 COG8Q96MW5 612 aa16.69■□□□□ 0.26
TRIM39-201ENST00000376656 GPR78Q96P69 363 aa16.69■□□□□ 0.26
TRIM39-201ENST00000376656 TCF12Q99081 682 aa16.69■□□□□ 0.26
TRIM39-201ENST00000376656 RHOJQ9H4E5 214 aa16.69■□□□□ 0.26
TRIM39-201ENST00000376656 TUBGCP4Q9UGJ1 667 aa16.69■□□□□ 0.26
TRIM39-201ENST00000376656 BPTFQ12830 3046 aa16.69■□□□□ 0.26
TRIM39-201ENST00000376656 A0A087WZ62 844 aa16.68■□□□□ 0.26
TRIM39-201ENST00000376656 FAM149AA5PLN7 773 aa16.68■□□□□ 0.26
TRIM39-201ENST00000376656 CLIC3O95833 236 aa16.68■□□□□ 0.26
TRIM39-201ENST00000376656 AHSGP02765 367 aa16.68■□□□□ 0.26
TRIM39-201ENST00000376656 BMP2P12643 396 aa16.68■□□□□ 0.26
TRIM39-201ENST00000376656 CD68P34810 354 aaPredicted RBP16.68■□□□□ 0.26
TRIM39-201ENST00000376656 PHEXP78562 749 aa16.68■□□□□ 0.26
TRIM39-201ENST00000376656 DHFR2Q86XF0 187 aa16.68■□□□□ 0.26
TRIM39-201ENST00000376656 OR9I1Q8NGQ6 314 aa16.68■□□□□ 0.26
TRIM39-201ENST00000376656 TBC1D15Q8TC07 691 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms