RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 ADRA1BP35368 520 aa15.2■□□□□ 0.02
CLCN6-204ENST00000376491 ACTN2P35609 894 aa15.2■□□□□ 0.02
CLCN6-204ENST00000376491 HNRNPKP61978 463 aaKnown RBP eCLIP15.2■□□□□ 0.02
CLCN6-204ENST00000376491 NRG1Q02297 640 aaPredicted RBP15.2■□□□□ 0.02
CLCN6-204ENST00000376491 CCDC173Q0VFZ6 552 aa15.2■□□□□ 0.02
CLCN6-204ENST00000376491 CDO1Q16878 200 aa15.2■□□□□ 0.02
CLCN6-204ENST00000376491 CCDC14Q49A88 953 aa15.2■□□□□ 0.02
CLCN6-204ENST00000376491 FAM72AQ5TYM5 149 aa15.2■□□□□ 0.02
CLCN6-204ENST00000376491 FAM72DQ6L9T8 149 aa15.2■□□□□ 0.02
CLCN6-204ENST00000376491 FAM72BQ86X60 149 aa15.2■□□□□ 0.02
CLCN6-204ENST00000376491 SPACA3Q8IXA5 215 aa15.2■□□□□ 0.02
CLCN6-204ENST00000376491 PLPP6Q8IY26 295 aa15.2■□□□□ 0.02
CLCN6-204ENST00000376491 ZNF548Q8NEK5 533 aaPredicted RBP15.2■□□□□ 0.02
CLCN6-204ENST00000376491 OR6K2Q8NGY2 324 aa15.2■□□□□ 0.02
CLCN6-204ENST00000376491 JOSD2Q8TAC2 188 aa15.2■□□□□ 0.02
CLCN6-204ENST00000376491 RXFP2Q8WXD0 754 aa15.2■□□□□ 0.02
CLCN6-204ENST00000376491 ARHGEF2Q92974 986 aaKnown RBP15.2■□□□□ 0.02
CLCN6-204ENST00000376491 ISG20Q96AZ6 181 aaKnown RBP15.2■□□□□ 0.02
CLCN6-204ENST00000376491 FCRL3Q96P31 734 aaPredicted RBP15.2■□□□□ 0.02
CLCN6-204ENST00000376491 C1QTNF2Q9BXJ5 285 aa15.2■□□□□ 0.02
CLCN6-204ENST00000376491 GANQ9H2C0 597 aa15.2■□□□□ 0.02
CLCN6-204ENST00000376491 OR12D3Q9UGF7 316 aa15.2■□□□□ 0.02
CLCN6-204ENST00000376491 DNAI1Q9UI46 699 aa15.2■□□□□ 0.02
CLCN6-204ENST00000376491 NEU3Q9UQ49 428 aa15.2■□□□□ 0.02
CLCN6-204ENST00000376491 ITM2BQ9Y287 266 aa15.2■□□□□ 0.02
CLCN6-204ENST00000376491 LRRK1Q38SD2 2015 aa15.19■□□□□ 0.02
CLCN6-204ENST00000376491 IGLON5A6NGN9 336 aa15.19■□□□□ 0.02
CLCN6-204ENST00000376491 C16orf96A6NNT2 1141 aa15.19■□□□□ 0.02
CLCN6-204ENST00000376491 ATXN7O15265 892 aaPredicted RBP15.19■□□□□ 0.02
CLCN6-204ENST00000376491 CSF2P04141 144 aa15.19■□□□□ 0.02
CLCN6-204ENST00000376491 MPOP05164 745 aa15.19■□□□□ 0.02
CLCN6-204ENST00000376491 GP1BAP07359 652 aa15.19■□□□□ 0.02
CLCN6-204ENST00000376491 ALPPL2P10696 532 aa15.19■□□□□ 0.02
CLCN6-204ENST00000376491 FMO1Q01740 532 aa15.19■□□□□ 0.02
CLCN6-204ENST00000376491 TLE3Q04726 772 aa15.19■□□□□ 0.02
CLCN6-204ENST00000376491 EIF2B5Q13144 721 aaKnown RBP15.19■□□□□ 0.02
CLCN6-204ENST00000376491 TCP11X2Q5H9J9 407 aa15.19■□□□□ 0.02
CLCN6-204ENST00000376491 PARGQ86W56 976 aa15.19■□□□□ 0.02
CLCN6-204ENST00000376491 MSANTD4Q8NCY6 345 aa15.19■□□□□ 0.02
CLCN6-204ENST00000376491 GPT2Q8TD30 523 aa15.19■□□□□ 0.02
CLCN6-204ENST00000376491 SLC39A7Q92504 469 aa15.19■□□□□ 0.02
CLCN6-204ENST00000376491 LENG8Q96PV6 779 aaPredicted RBP15.19■□□□□ 0.02
CLCN6-204ENST00000376491 DUSP23Q9BVJ7 150 aa15.19■□□□□ 0.02
CLCN6-204ENST00000376491 OSBPL2Q9H1P3 480 aa15.19■□□□□ 0.02
CLCN6-204ENST00000376491 TMEM248Q9NWD8 314 aa15.19■□□□□ 0.02
CLCN6-204ENST00000376491 TAB2Q9NYJ8 693 aa15.19■□□□□ 0.02
CLCN6-204ENST00000376491 CXorf51AA0A1B0GTR3 108 aa15.18■□□□□ 0.02
CLCN6-204ENST00000376491 C2CD4BA6NLJ0 364 aa15.18■□□□□ 0.02
CLCN6-204ENST00000376491 TSPAN6O43657 245 aa15.18■□□□□ 0.02
CLCN6-204ENST00000376491 CSO75390 466 aaKnown RBP15.18■□□□□ 0.02
CLCN6-204ENST00000376491 GFPT2O94808 682 aa15.18■□□□□ 0.02
CLCN6-204ENST00000376491 LRIG2O94898 1065 aa15.18■□□□□ 0.02
CLCN6-204ENST00000376491 RHOQP17081 205 aa15.18■□□□□ 0.02
CLCN6-204ENST00000376491 MMP8P22894 467 aa15.18■□□□□ 0.02
CLCN6-204ENST00000376491 RABIFP47224 123 aa15.18■□□□□ 0.02
CLCN6-204ENST00000376491 MAPKAPK2P49137 400 aa15.18■□□□□ 0.02
CLCN6-204ENST00000376491 KLK7P49862 253 aa15.18■□□□□ 0.02
CLCN6-204ENST00000376491 PFN3P60673 137 aa15.18■□□□□ 0.02
CLCN6-204ENST00000376491 PDE1CQ14123 709 aaPredicted RBP15.18■□□□□ 0.02
CLCN6-204ENST00000376491 ZNF805Q5CZA5 627 aa15.18■□□□□ 0.02
CLCN6-204ENST00000376491 RWDD4Q6NW29 188 aaKnown RBP15.18■□□□□ 0.02
CLCN6-204ENST00000376491 LEKR1Q6ZMV7 388 aa15.18■□□□□ 0.02
CLCN6-204ENST00000376491 RYBPQ8N488 228 aaPredicted RBP15.18■□□□□ 0.02
CLCN6-204ENST00000376491 CCDC185Q8N715 623 aa15.18■□□□□ 0.02
CLCN6-204ENST00000376491 SLC30A5Q8TAD4 765 aa15.18■□□□□ 0.02
CLCN6-204ENST00000376491 IFI44Q8TCB0 444 aa15.18■□□□□ 0.02
CLCN6-204ENST00000376491 C11orf70Q9BRQ4 267 aa15.18■□□□□ 0.02
CLCN6-204ENST00000376491 PNMA8BQ9ULN7 279 aaPredicted RBP15.18■□□□□ 0.02
CLCN6-204ENST00000376491 CSNK1G3Q9Y6M4 447 aa15.18■□□□□ 0.02
CLCN6-204ENST00000376491 TK2O00142 265 aa15.17■□□□□ 0.02
CLCN6-204ENST00000376491 FPGTO14772 594 aa15.17■□□□□ 0.02
CLCN6-204ENST00000376491 AREL1O15033 823 aa15.17■□□□□ 0.02
CLCN6-204ENST00000376491 EPHB6O15197 1021 aa15.17■□□□□ 0.02
CLCN6-204ENST00000376491 USP12O75317 370 aa15.17■□□□□ 0.02
CLCN6-204ENST00000376491 GSRP00390 522 aa15.17■□□□□ 0.02
CLCN6-204ENST00000376491 UGT2B4P06133 528 aa15.17■□□□□ 0.02
CLCN6-204ENST00000376491 JUNDP17535 347 aa15.17■□□□□ 0.02
CLCN6-204ENST00000376491 TGM2P21980 687 aa15.17■□□□□ 0.02
CLCN6-204ENST00000376491 SDC4P31431 198 aa15.17■□□□□ 0.02
CLCN6-204ENST00000376491 ETFBP38117 255 aa15.17■□□□□ 0.02
CLCN6-204ENST00000376491 DUSP3P51452 185 aaPredicted RBP15.17■□□□□ 0.02
CLCN6-204ENST00000376491 HDAC4P56524 1084 aa15.17■□□□□ 0.02
CLCN6-204ENST00000376491 GABREP78334 506 aa15.17■□□□□ 0.02
CLCN6-204ENST00000376491 CDR2Q01850 454 aa15.17■□□□□ 0.02
CLCN6-204ENST00000376491 PTP4A2Q12974 167 aa15.17■□□□□ 0.02
CLCN6-204ENST00000376491 SGCGQ13326 291 aa15.17■□□□□ 0.02
CLCN6-204ENST00000376491 CDKN3Q16667 212 aa15.17■□□□□ 0.02
CLCN6-204ENST00000376491 DEFB133Q30KQ1 61 aa15.17■□□□□ 0.02
CLCN6-204ENST00000376491 MYLK3Q32MK0 819 aa15.17■□□□□ 0.02
CLCN6-204ENST00000376491 ATXN7L2Q5T6C5 722 aaPredicted RBP15.17■□□□□ 0.02
CLCN6-204ENST00000376491 ZCCHC8Q6NZY4 707 aaKnown RBP15.17■□□□□ 0.02
CLCN6-204ENST00000376491 GUSBP11Q6P575 273 aa15.17■□□□□ 0.02
CLCN6-204ENST00000376491 PCSK4Q6UW60 755 aa15.17■□□□□ 0.02
CLCN6-204ENST00000376491 STRADAQ7RTN6 431 aa15.17■□□□□ 0.02
CLCN6-204ENST00000376491 GPR155Q7Z3F1 870 aa15.17■□□□□ 0.02
CLCN6-204ENST00000376491 ZSCAN30Q86W11 494 aa15.17■□□□□ 0.02
CLCN6-204ENST00000376491 ZNF677Q86XU0 584 aa15.17■□□□□ 0.02
CLCN6-204ENST00000376491 RBFAQ8N0V3 343 aa15.17■□□□□ 0.02
CLCN6-204ENST00000376491 NETO2Q8NC67 525 aa15.17■□□□□ 0.02
CLCN6-204ENST00000376491 DENND6BQ8NEG7 585 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms