RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 FNDC5Q8NAU1 212 aa18.15■□□□□ 0.5
PTPDC1-202ENST00000375360 GRHL1Q9NZI5 618 aa18.15■□□□□ 0.5
PTPDC1-202ENST00000375360 RCOR3Q9P2K3 495 aaPredicted RBP18.15■□□□□ 0.5
PTPDC1-202ENST00000375360 ADAMTS5Q9UNA0 930 aa18.15■□□□□ 0.5
PTPDC1-202ENST00000375360 MYH1P12882 1939 aa18.15■□□□□ 0.5
PTPDC1-202ENST00000375360 BCLAF3A2AJT9 711 aaKnown RBP18.15■□□□□ 0.5
PTPDC1-202ENST00000375360 POTEHQ6S545 545 aa18.15■□□□□ 0.5
PTPDC1-202ENST00000375360 TMEM110Q86TL2 294 aa18.15■□□□□ 0.5
PTPDC1-202ENST00000375360 JADE3Q92613 823 aa18.15■□□□□ 0.5
PTPDC1-202ENST00000375360 TLE6Q9H808 572 aa18.15■□□□□ 0.5
PTPDC1-202ENST00000375360 MRGBPQ9NV56 204 aa18.15■□□□□ 0.5
PTPDC1-202ENST00000375360 XPR1Q9UBH6 696 aa18.15■□□□□ 0.5
PTPDC1-202ENST00000375360 SOX13Q9UN79 622 aa18.15■□□□□ 0.5
PTPDC1-202ENST00000375360 CCDC88AQ3V6T2 1871 aa18.15■□□□□ 0.5
PTPDC1-202ENST00000375360 C2P06681 752 aa18.15■□□□□ 0.5
PTPDC1-202ENST00000375360 OR56A5P0C7T3 313 aa18.15■□□□□ 0.5
PTPDC1-202ENST00000375360 PTPN4P29074 926 aa18.15■□□□□ 0.5
PTPDC1-202ENST00000375360 CDK7P50613 346 aa18.15■□□□□ 0.5
PTPDC1-202ENST00000375360 PGS1Q32NB8 556 aa18.15■□□□□ 0.5
PTPDC1-202ENST00000375360 ING5Q8WYH8 240 aa18.15■□□□□ 0.5
PTPDC1-202ENST00000375360 SLC4A5Q9BY07 1137 aa18.15■□□□□ 0.5
PTPDC1-202ENST00000375360 R3HDMLQ9H3Y0 253 aa18.15■□□□□ 0.5
PTPDC1-202ENST00000375360 PARVBQ9HBI1 364 aa18.15■□□□□ 0.5
PTPDC1-202ENST00000375360 FAM32AQ9Y421 112 aaKnown RBP18.15■□□□□ 0.5
PTPDC1-202ENST00000375360 MYADML2A6NDP7 307 aa18.14■□□□□ 0.49
PTPDC1-202ENST00000375360 EDIL3O43854 480 aa18.14■□□□□ 0.49
PTPDC1-202ENST00000375360 CLDN11O75508 207 aa18.14■□□□□ 0.49
PTPDC1-202ENST00000375360 ALADP13716 330 aa18.14■□□□□ 0.49
PTPDC1-202ENST00000375360 LPOP22079 712 aaPredicted RBP18.14■□□□□ 0.49
PTPDC1-202ENST00000375360 ATP6AP1LQ52LC2 224 aa18.14■□□□□ 0.49
PTPDC1-202ENST00000375360 PTGR2Q8N8N7 351 aaPredicted RBP18.14■□□□□ 0.49
PTPDC1-202ENST00000375360 PSMG2Q969U7 264 aa18.14■□□□□ 0.49
PTPDC1-202ENST00000375360 OTULINQ96BN8 352 aa18.14■□□□□ 0.49
PTPDC1-202ENST00000375360 MARK4Q96L34 752 aa18.14■□□□□ 0.49
PTPDC1-202ENST00000375360 HGH1Q9BTY7 390 aa18.14■□□□□ 0.49
PTPDC1-202ENST00000375360 FBXW11Q9UKB1 542 aa18.14■□□□□ 0.49
PTPDC1-202ENST00000375360 PACSIN3Q9UKS6 424 aa18.14■□□□□ 0.49
PTPDC1-202ENST00000375360 SLC9A3R1O14745 358 aaPredicted RBP18.14■□□□□ 0.49
PTPDC1-202ENST00000375360 HNRNPLP14866 589 aaKnown RBP eCLIP18.14■□□□□ 0.499e-9■■■□□ 16.4
PTPDC1-202ENST00000375360 BNC2Q6ZN30 1099 aaPredicted RBP18.14■□□□□ 0.49
PTPDC1-202ENST00000375360 GLIS1Q8NBF1 620 aa18.14■□□□□ 0.49
PTPDC1-202ENST00000375360 CEP70Q8NHQ1 597 aa18.14■□□□□ 0.49
PTPDC1-202ENST00000375360 MCOLN3Q8TDD5 553 aa18.14■□□□□ 0.49
PTPDC1-202ENST00000375360 DNAJC9Q8WXX5 260 aa18.14■□□□□ 0.49
PTPDC1-202ENST00000375360 MYOCQ99972 504 aa18.14■□□□□ 0.49
PTPDC1-202ENST00000375360 NFKBIZQ9BYH8 718 aa18.14■□□□□ 0.49
PTPDC1-202ENST00000375360 YIPF3Q9GZM5 350 aa18.14■□□□□ 0.49
PTPDC1-202ENST00000375360 XYLT2Q9H1B5 865 aa18.14■□□□□ 0.49
PTPDC1-202ENST00000375360 SLC28A3Q9HAS3 691 aa18.14■□□□□ 0.49
PTPDC1-202ENST00000375360 CNTN3Q9P232 1028 aa18.14■□□□□ 0.49
PTPDC1-202ENST00000375360 MYH3P11055 1940 aa18.14■□□□□ 0.49
PTPDC1-202ENST00000375360 LTA4HP09960 611 aaKnown RBP18.14■□□□□ 0.49
PTPDC1-202ENST00000375360 SMARCB1Q12824 385 aa18.14■□□□□ 0.49
PTPDC1-202ENST00000375360 CDC16Q13042 620 aa18.14■□□□□ 0.49
PTPDC1-202ENST00000375360 FAM151BQ6UXP7 276 aa18.14■□□□□ 0.49
PTPDC1-202ENST00000375360 MILR1Q7Z6M3 343 aa18.14■□□□□ 0.49
PTPDC1-202ENST00000375360 NRBF2Q96F24 287 aa18.14■□□□□ 0.49
PTPDC1-202ENST00000375360 SERAC1Q96JX3 654 aa18.14■□□□□ 0.49
PTPDC1-202ENST00000375360 PPP1R10Q96QC0 940 aaKnown RBP18.14■□□□□ 0.49
PTPDC1-202ENST00000375360 EVLQ9UI08 416 aaPredicted RBP18.14■□□□□ 0.49
PTPDC1-202ENST00000375360 MSRAQ9UJ68 235 aa18.14■□□□□ 0.49
PTPDC1-202ENST00000375360 MEIS3P2A8K0S8 358 aa18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 LYPLA1O75608 230 aaPredicted RBP18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 PDE5AO76074 875 aa18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 METTL18O95568 372 aa18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 CPSF4O95639 269 aaKnown RBP18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 TYMPP19971 482 aa18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 CCDC142Q17RM4 750 aa18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 PPM1JQ5JR12 505 aa18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 CMASQ8NFW8 434 aaPredicted RBP18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 OR4K2Q8NGD2 314 aa18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 TRPC4APQ8TEL6 797 aa18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 SLC35F5Q8WV83 523 aa18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 BCO2Q9BYV7 579 aa18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 ADNPQ9H2P0 1102 aa18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 CPQQ9Y646 472 aa18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 RHOQP17081 205 aa18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 RPS24P62847 133 aaKnown RBP18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 TCHHL1Q5QJ38 904 aaPredicted RBP18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 STXBP5Q5T5C0 1151 aa18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 SNX32Q86XE0 403 aa18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 C7orf61Q8IZ16 206 aa18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 CHPFQ8IZ52 775 aa18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 SPOCK2Q92563 424 aa18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 RPL10LQ96L21 214 aaKnown RBP18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 THEGQ9P2T0 379 aa18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 MGAT4DA6NG13 374 aa18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 ACSL4O60488 711 aa18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 ZMPSTE24O75844 475 aa18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 RFX3P48380 749 aa18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 CRY1Q16526 586 aa18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 PDK4Q16654 411 aa18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 ARMC6Q6NXE6 501 aa18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 IRGQQ8WZA9 623 aa18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 DDX1Q92499 740 aaKnown RBP18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 MTFMTQ96DP5 389 aaKnown RBP18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 RNF186Q9NXI6 227 aa18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 ACTL7BQ9Y614 415 aa18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 UBR2Q8IWV8 1755 aa18.13■□□□□ 0.49
PTPDC1-202ENST00000375360 COL16A1Q07092 1604 aaPredicted RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 158.8 ms