RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 ZC3HC1Q86WB0 502 aaKnown RBP19.84■□□□□ 0.77
HDAC1-201ENST00000373548 CMTR2Q8IYT2 770 aaKnown RBP19.84■□□□□ 0.77
HDAC1-201ENST00000373548 OR52K2Q8NGK3 314 aa19.84■□□□□ 0.77
HDAC1-201ENST00000373548 PRICKLE1Q96MT3 831 aaPredicted RBP19.84■□□□□ 0.77
HDAC1-201ENST00000373548 RNF38Q9H0F5 515 aa19.84■□□□□ 0.77
HDAC1-201ENST00000373548 ZNF395Q9H8N7 513 aaPredicted RBP19.84■□□□□ 0.77
HDAC1-201ENST00000373548 KCNK13Q9HB14 408 aa19.84■□□□□ 0.77
HDAC1-201ENST00000373548 ZNF358Q9NW07 568 aa19.84■□□□□ 0.77
HDAC1-201ENST00000373548 A0A0D9SEW6 157 aa19.83■□□□□ 0.77
HDAC1-201ENST00000373548 C2orf78A6NCI8 922 aa19.83■□□□□ 0.77
HDAC1-201ENST00000373548 TRIM43BA6NCK2 446 aa19.83■□□□□ 0.77
HDAC1-201ENST00000373548 H3BNC9 293 aa19.83■□□□□ 0.77
HDAC1-201ENST00000373548 DLDP09622 509 aaKnown RBP19.83■□□□□ 0.77
HDAC1-201ENST00000373548 HOXD9P28356 352 aaPredicted RBP19.83■□□□□ 0.77
HDAC1-201ENST00000373548 GABRB3P28472 473 aa19.83■□□□□ 0.77
HDAC1-201ENST00000373548 GRM3Q14832 879 aa19.83■□□□□ 0.77
HDAC1-201ENST00000373548 TAF12Q16514 161 aa19.83■□□□□ 0.77
HDAC1-201ENST00000373548 DDX53Q86TM3 631 aaKnown RBP19.83■□□□□ 0.77
HDAC1-201ENST00000373548 PLD6Q8N2A8 252 aaKnown RBP19.83■□□□□ 0.77
HDAC1-201ENST00000373548 TRIM43Q96BQ3 446 aaPredicted RBP19.83■□□□□ 0.77
HDAC1-201ENST00000373548 PAWRQ96IZ0 340 aaKnown RBP19.83■□□□□ 0.77
HDAC1-201ENST00000373548 GPR22Q99680 433 aa19.83■□□□□ 0.77
HDAC1-201ENST00000373548 RHOJQ9H4E5 214 aa19.83■□□□□ 0.77
HDAC1-201ENST00000373548 PTPRSQ13332 1948 aa19.83■□□□□ 0.76
HDAC1-201ENST00000373548 PLXNA4Q9HCM2 1894 aa19.82■□□□□ 0.76
HDAC1-201ENST00000373548 A0A0G2JND7 137 aa19.82■□□□□ 0.76
HDAC1-201ENST00000373548 MUSKO15146 869 aa19.82■□□□□ 0.76
HDAC1-201ENST00000373548 SNNO75324 88 aaPredicted RBP19.82■□□□□ 0.76
HDAC1-201ENST00000373548 TIMP1P01033 207 aa19.82■□□□□ 0.76
HDAC1-201ENST00000373548 CORO1AP31146 461 aaKnown RBP19.82■□□□□ 0.76
HDAC1-201ENST00000373548 SERPINH1P50454 418 aaKnown RBP19.82■□□□□ 0.76
HDAC1-201ENST00000373548 CDH4P55283 916 aa19.82■□□□□ 0.76
HDAC1-201ENST00000373548 GNA12Q03113 381 aa19.82■□□□□ 0.76
HDAC1-201ENST00000373548 TWF1Q12792 350 aa19.82■□□□□ 0.76
HDAC1-201ENST00000373548 MSLNQ13421 630 aaPredicted RBP19.82■□□□□ 0.76
HDAC1-201ENST00000373548 PCLAFQ15004 111 aa19.82■□□□□ 0.76
HDAC1-201ENST00000373548 MBLAC2Q68D91 279 aa19.82■□□□□ 0.76
HDAC1-201ENST00000373548 ZCCHC23Q6ZST2 131 aa19.82■□□□□ 0.76
HDAC1-201ENST00000373548 DENND6AQ8IWF6 608 aa19.82■□□□□ 0.76
HDAC1-201ENST00000373548 WBP2Q969T9 261 aa19.82■□□□□ 0.76
HDAC1-201ENST00000373548 PRKD2Q9BZL6 878 aa19.82■□□□□ 0.76
HDAC1-201ENST00000373548 MAGEH1Q9H213 219 aa19.82■□□□□ 0.76
HDAC1-201ENST00000373548 WBP1LQ9NX94 342 aa19.82■□□□□ 0.76
HDAC1-201ENST00000373548 UXTQ9UBK9 157 aaPredicted RBP19.82■□□□□ 0.76
HDAC1-201ENST00000373548 A0A096LPK6 155 aa19.82■□□□□ 0.76
HDAC1-201ENST00000373548 PRRG1O14668 218 aa19.82■□□□□ 0.76
HDAC1-201ENST00000373548 GJB3O75712 270 aa19.82■□□□□ 0.76
HDAC1-201ENST00000373548 MPOP05164 745 aa19.82■□□□□ 0.76
HDAC1-201ENST00000373548 CSRP3P50461 194 aa19.82■□□□□ 0.76
HDAC1-201ENST00000373548 C1QTNF8P60827 252 aa19.82■□□□□ 0.76
HDAC1-201ENST00000373548 VEPH1Q14D04 833 aa19.82■□□□□ 0.76
HDAC1-201ENST00000373548 RABGAP1LQ5R372 815 aa19.82■□□□□ 0.76
HDAC1-201ENST00000373548 KIAA0930Q6ICG6 404 aaPredicted RBP19.82■□□□□ 0.76
HDAC1-201ENST00000373548 CLEC14AQ86T13 490 aa19.82■□□□□ 0.76
HDAC1-201ENST00000373548 OR7D4Q8NG98 312 aa19.82■□□□□ 0.76
HDAC1-201ENST00000373548 KLF16Q9BXK1 252 aaPredicted RBP19.82■□□□□ 0.76
HDAC1-201ENST00000373548 C20orf27Q9GZN8 174 aa19.82■□□□□ 0.76
HDAC1-201ENST00000373548 C11orf49Q9H6J7 331 aa19.82■□□□□ 0.76
HDAC1-201ENST00000373548 RETREG1Q9H6L5 497 aa19.82■□□□□ 0.76
HDAC1-201ENST00000373548 SLC40A1Q9NP59 571 aa19.82■□□□□ 0.76
HDAC1-201ENST00000373548 SIN3BO75182 1162 aa19.81■□□□□ 0.76
HDAC1-201ENST00000373548 AHSGP02765 367 aa19.81■□□□□ 0.76
HDAC1-201ENST00000373548 C2P06681 752 aa19.81■□□□□ 0.76
HDAC1-201ENST00000373548 FGF3P11487 239 aaPredicted RBP19.81■□□□□ 0.76
HDAC1-201ENST00000373548 SGSHP51688 502 aa19.81■□□□□ 0.76
HDAC1-201ENST00000373548 MPP1Q00013 466 aa19.81■□□□□ 0.76
HDAC1-201ENST00000373548 IRF9Q00978 393 aa19.81■□□□□ 0.76
HDAC1-201ENST00000373548 CTBP1Q13363 440 aa19.81■□□□□ 0.76
HDAC1-201ENST00000373548 ARMC3Q5W041 872 aa19.81■□□□□ 0.76
HDAC1-201ENST00000373548 DNAJB7Q7Z6W7 309 aaPredicted RBP19.81■□□□□ 0.76
HDAC1-201ENST00000373548 PACS2Q86VP3 889 aa19.81■□□□□ 0.76
HDAC1-201ENST00000373548 RANBP9Q96S59 729 aa19.81■□□□□ 0.76
HDAC1-201ENST00000373548 SEMA3CQ99985 751 aa19.81■□□□□ 0.76
HDAC1-201ENST00000373548 TMEM120AQ9BXJ8 343 aa19.81■□□□□ 0.76
HDAC1-201ENST00000373548 POLR1EQ9GZS1 481 aaKnown RBP19.81■□□□□ 0.76
HDAC1-201ENST00000373548 SLC39A10Q9ULF5 831 aa19.81■□□□□ 0.76
HDAC1-201ENST00000373548 NUMBLQ9Y6R0 609 aa19.81■□□□□ 0.76
HDAC1-201ENST00000373548 OBSL1O75147 1896 aa19.81■□□□□ 0.76
HDAC1-201ENST00000373548 HEATR9A2RTY3 570 aa19.81■□□□□ 0.76
HDAC1-201ENST00000373548 ACRP10323 421 aa19.81■□□□□ 0.76
HDAC1-201ENST00000373548 IRF1P10914 325 aa19.81■□□□□ 0.76
HDAC1-201ENST00000373548 PAMP19021 973 aa19.81■□□□□ 0.76
HDAC1-201ENST00000373548 HADHAP40939 763 aa19.81■□□□□ 0.76
HDAC1-201ENST00000373548 GJA8P48165 433 aa19.81■□□□□ 0.76
HDAC1-201ENST00000373548 ARFIP2P53365 341 aa19.81■□□□□ 0.76
HDAC1-201ENST00000373548 STX3Q13277 289 aa19.81■□□□□ 0.76
HDAC1-201ENST00000373548 ZNF235Q14590 738 aa19.81■□□□□ 0.76
HDAC1-201ENST00000373548 TMEM150AQ86TG1 271 aa19.81■□□□□ 0.76
HDAC1-201ENST00000373548 TCEAL8Q8IYN2 117 aa19.81■□□□□ 0.76
HDAC1-201ENST00000373548 ZNF599Q96NL3 588 aa19.81■□□□□ 0.76
HDAC1-201ENST00000373548 AGO1Q9UL18 857 aaKnown RBP19.81■□□□□ 0.76
HDAC1-201ENST00000373548 INSL5Q9Y5Q6 135 aa19.81■□□□□ 0.76
HDAC1-201ENST00000373548 LOC285095A0A1B0GVY8 99 aa19.8■□□□□ 0.76
HDAC1-201ENST00000373548 RASSF9O75901 435 aa19.8■□□□□ 0.76
HDAC1-201ENST00000373548 ATXN1LP0C7T5 689 aaKnown RBP19.8■□□□□ 0.76
HDAC1-201ENST00000373548 UGP2Q16851 508 aa19.8■□□□□ 0.76
HDAC1-201ENST00000373548 SIRPB2Q5JXA9 342 aa19.8■□□□□ 0.76
HDAC1-201ENST00000373548 COPG2Q9UBF2 871 aa19.8■□□□□ 0.76
HDAC1-201ENST00000373548 ACTL7AQ9Y615 435 aa19.8■□□□□ 0.76
HDAC1-201ENST00000373548 CLDN11O75508 207 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms