RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 OR8H2Q8N162 312 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 GATAD2BQ8WXI9 593 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 TMEM159Q96B96 161 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 PRKD2Q9BZL6 878 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 POLR1EQ9GZS1 481 aaKnown RBP13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 RNPEPL1Q9HAU8 725 aa13.47□□□□□ -0.25
RAPGEF1-201ENST00000372189 MTA2O94776 668 aa13.46□□□□□ -0.25
RAPGEF1-201ENST00000372189 TCF3P15923 654 aa13.46□□□□□ -0.25
RAPGEF1-201ENST00000372189 CDC25CP30307 473 aa13.46□□□□□ -0.25
RAPGEF1-201ENST00000372189 OTOP2Q7RTS6 562 aa13.46□□□□□ -0.25
RAPGEF1-201ENST00000372189 DDX18Q9NVP1 670 aaKnown RBP13.46□□□□□ -0.25
RAPGEF1-201ENST00000372189 STARD13Q9Y3M8 1113 aa13.46□□□□□ -0.25
RAPGEF1-201ENST00000372189 DDX3XO00571 662 aaKnown RBP eCLIP13.46□□□□□ -0.25
RAPGEF1-201ENST00000372189 CCNE2O96020 404 aa13.46□□□□□ -0.25
RAPGEF1-201ENST00000372189 OR56A5P0C7T3 313 aa13.46□□□□□ -0.25
RAPGEF1-201ENST00000372189 ZNF7P17097 686 aaPredicted RBP13.46□□□□□ -0.25
RAPGEF1-201ENST00000372189 C21orf59P57076 290 aa13.46□□□□□ -0.25
RAPGEF1-201ENST00000372189 SETMARQ53H47 684 aaPredicted RBP13.46□□□□□ -0.25
RAPGEF1-201ENST00000372189 RGL4Q8IZJ4 473 aa13.46□□□□□ -0.25
RAPGEF1-201ENST00000372189 SVOPQ8N4V2 548 aa13.46□□□□□ -0.25
RAPGEF1-201ENST00000372189 BTN2A2Q8WVV5 523 aa13.46□□□□□ -0.25
RAPGEF1-201ENST00000372189 PRCCQ92733 491 aaPredicted RBP13.46□□□□□ -0.25
RAPGEF1-201ENST00000372189 SEZ6LQ9BYH1 1024 aa13.46□□□□□ -0.25
RAPGEF1-201ENST00000372189 CYP4F12Q9HCS2 524 aa13.46□□□□□ -0.25
RAPGEF1-201ENST00000372189 ADAM30Q9UKF2 790 aa13.46□□□□□ -0.25
RAPGEF1-201ENST00000372189 SIGLEC16A6NMB1 481 aa13.46□□□□□ -0.25
RAPGEF1-201ENST00000372189 PCNAP12004 261 aa13.46□□□□□ -0.25
RAPGEF1-201ENST00000372189 MLNP12872 115 aa13.46□□□□□ -0.25
RAPGEF1-201ENST00000372189 TPH1P17752 444 aa13.46□□□□□ -0.25
RAPGEF1-201ENST00000372189 CYP2A7P20853 494 aa13.46□□□□□ -0.25
RAPGEF1-201ENST00000372189 BRCC3P46736 316 aa13.46□□□□□ -0.25
RAPGEF1-201ENST00000372189 SMARCB1Q12824 385 aa13.46□□□□□ -0.25
RAPGEF1-201ENST00000372189 C16orf62Q7Z3J2 963 aa13.46□□□□□ -0.25
RAPGEF1-201ENST00000372189 DHFR2Q86XF0 187 aa13.46□□□□□ -0.25
RAPGEF1-201ENST00000372189 CXorf40AQ8TE69 158 aa13.46□□□□□ -0.25
RAPGEF1-201ENST00000372189 SERAC1Q96JX3 654 aa13.46□□□□□ -0.25
RAPGEF1-201ENST00000372189 VAT1Q99536 393 aa13.46□□□□□ -0.25
RAPGEF1-201ENST00000372189 SOWAHBA6NEL2 793 aa13.46□□□□□ -0.26
RAPGEF1-201ENST00000372189 F8VP50 259 aa13.46□□□□□ -0.26
RAPGEF1-201ENST00000372189 CBX6O95503 412 aa13.46□□□□□ -0.26
RAPGEF1-201ENST00000372189 DDR2Q16832 855 aa13.46□□□□□ -0.26
RAPGEF1-201ENST00000372189 DOK6Q6PKX4 331 aa13.46□□□□□ -0.26
RAPGEF1-201ENST00000372189 CLVS1Q8IUQ0 354 aaPredicted RBP13.46□□□□□ -0.26
RAPGEF1-201ENST00000372189 CROTQ9UKG9 612 aa13.46□□□□□ -0.26
RAPGEF1-201ENST00000372189 XRN1Q8IZH2 1706 aaKnown RBP13.46□□□□□ -0.26
RAPGEF1-201ENST00000372189 CNTNAP1P78357 1384 aa13.46□□□□□ -0.26
RAPGEF1-201ENST00000372189 GJB6O95452 261 aa13.46□□□□□ -0.26
RAPGEF1-201ENST00000372189 SP100P23497 879 aaPredicted RBP13.46□□□□□ -0.26
RAPGEF1-201ENST00000372189 OR1D2P34982 312 aa13.46□□□□□ -0.26
RAPGEF1-201ENST00000372189 NCALDP61601 193 aa13.46□□□□□ -0.26
RAPGEF1-201ENST00000372189 SNRPD1P62314 119 aaKnown RBP13.46□□□□□ -0.26
RAPGEF1-201ENST00000372189 ILF2Q12905 390 aaKnown RBP13.46□□□□□ -0.26
RAPGEF1-201ENST00000372189 DLG1Q12959 904 aa13.46□□□□□ -0.26
RAPGEF1-201ENST00000372189 PIGZQ86VD9 579 aa13.46□□□□□ -0.26
RAPGEF1-201ENST00000372189 ZCCHC7Q8N3Z6 543 aaKnown RBP13.46□□□□□ -0.26
RAPGEF1-201ENST00000372189 LENG1Q96BZ8 264 aaPredicted RBP13.46□□□□□ -0.26
RAPGEF1-201ENST00000372189 ZNF180Q9UJW8 692 aa13.46□□□□□ -0.26
RAPGEF1-201ENST00000372189 MAGED1Q9Y5V3 778 aaPredicted RBP13.46□□□□□ -0.26
RAPGEF1-201ENST00000372189 C1orf232A0A0U1RR37 186 aa13.45□□□□□ -0.26
RAPGEF1-201ENST00000372189 PHGDHO43175 533 aaKnown RBP13.45□□□□□ -0.26
RAPGEF1-201ENST00000372189 RARAP10276 462 aa13.45□□□□□ -0.26
RAPGEF1-201ENST00000372189 NCF4Q15080 339 aa13.45□□□□□ -0.26
RAPGEF1-201ENST00000372189 FAM98BQ52LJ0 330 aaKnown RBP13.45□□□□□ -0.26
RAPGEF1-201ENST00000372189 SLC45A4Q5BKX6 768 aa13.45□□□□□ -0.26
RAPGEF1-201ENST00000372189 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.45□□□□□ -0.26
RAPGEF1-201ENST00000372189 B3GNT6Q6ZMB0 384 aa13.45□□□□□ -0.26
RAPGEF1-201ENST00000372189 C12orf42Q96LP6 360 aa13.45□□□□□ -0.26
RAPGEF1-201ENST00000372189 BDH2Q9BUT1 245 aa13.45□□□□□ -0.26
RAPGEF1-201ENST00000372189 NIFKQ9BYG3 293 aaKnown RBP13.45□□□□□ -0.26
RAPGEF1-201ENST00000372189 GANQ9H2C0 597 aa13.45□□□□□ -0.26
RAPGEF1-201ENST00000372189 MAN1C1Q9NR34 630 aa13.45□□□□□ -0.26
RAPGEF1-201ENST00000372189 PEAK1Q9H792 1746 aa13.45□□□□□ -0.26
RAPGEF1-201ENST00000372189 EPN2O95208 641 aa13.45□□□□□ -0.26
RAPGEF1-201ENST00000372189 ELK3P41970 407 aa13.45□□□□□ -0.26
RAPGEF1-201ENST00000372189 RNF43Q68DV7 783 aa13.45□□□□□ -0.26
RAPGEF1-201ENST00000372189 HJURPQ8NCD3 748 aaPredicted RBP13.45□□□□□ -0.26
RAPGEF1-201ENST00000372189 CKAP2Q8WWK9 683 aa13.45□□□□□ -0.26
RAPGEF1-201ENST00000372189 AHCYL2Q96HN2 611 aaKnown RBP13.45□□□□□ -0.26
RAPGEF1-201ENST00000372189 KCNK4Q9NYG8 393 aa13.45□□□□□ -0.26
RAPGEF1-201ENST00000372189 SLC45A1Q9Y2W3 748 aa13.45□□□□□ -0.26
RAPGEF1-201ENST00000372189 ZNF862O60290 1169 aa13.45□□□□□ -0.26
RAPGEF1-201ENST00000372189 TRAF2Q12933 501 aa13.45□□□□□ -0.26
RAPGEF1-201ENST00000372189 TMEM63BQ5T3F8 832 aa13.45□□□□□ -0.26
RAPGEF1-201ENST00000372189 SDHAF4Q5VUM1 108 aa13.45□□□□□ -0.26
RAPGEF1-201ENST00000372189 KIAA1324Q6UXG2 1013 aaKnown RBP13.45□□□□□ -0.26
RAPGEF1-201ENST00000372189 KRT78Q8N1N4 520 aa13.45□□□□□ -0.26
RAPGEF1-201ENST00000372189 OR5B17Q8NGF7 314 aa13.45□□□□□ -0.26
RAPGEF1-201ENST00000372189 ZNF510Q9Y2H8 683 aa13.45□□□□□ -0.26
RAPGEF1-201ENST00000372189 SPATA31D3P0C874 917 aa13.45□□□□□ -0.26
RAPGEF1-201ENST00000372189 ITGB6P18564 788 aa13.45□□□□□ -0.26
RAPGEF1-201ENST00000372189 MAGEA8P43361 318 aa13.45□□□□□ -0.26
RAPGEF1-201ENST00000372189 CCT8P50990 548 aa13.45□□□□□ -0.26
RAPGEF1-201ENST00000372189 PURAQ00577 322 aaKnown RBP13.45□□□□□ -0.26
RAPGEF1-201ENST00000372189 IL5RAQ01344 420 aa13.45□□□□□ -0.26
RAPGEF1-201ENST00000372189 RHAGQ02094 409 aa13.45□□□□□ -0.26
RAPGEF1-201ENST00000372189 CNTN1Q12860 1018 aa13.45□□□□□ -0.26
RAPGEF1-201ENST00000372189 SPATA31D4Q6ZUB0 917 aa13.45□□□□□ -0.26
RAPGEF1-201ENST00000372189 MREGQ8N565 214 aa13.45□□□□□ -0.26
RAPGEF1-201ENST00000372189 CLEC4DQ8WXI8 215 aa13.45□□□□□ -0.26
RAPGEF1-201ENST00000372189 SIPA1Q96FS4 1042 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms