RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 GNPTGQ9UJJ9 305 aa12.58□□□□□ -0.4
HCFC1-202ENST00000369984 MRPL42Q9Y6G3 142 aaKnown RBP12.58□□□□□ -0.4
HCFC1-202ENST00000369984 G3V2T6 193 aa12.58□□□□□ -0.4
HCFC1-202ENST00000369984 RBMXL2O75526 392 aaKnown RBP12.58□□□□□ -0.4
HCFC1-202ENST00000369984 FSBPO95073 299 aa12.58□□□□□ -0.4
HCFC1-202ENST00000369984 ALDH2P05091 517 aa12.58□□□□□ -0.4
HCFC1-202ENST00000369984 LYNP07948 512 aa12.58□□□□□ -0.4
HCFC1-202ENST00000369984 AMPD2Q01433 879 aa12.58□□□□□ -0.4
HCFC1-202ENST00000369984 ST3GAL1Q11201 340 aa12.58□□□□□ -0.4
HCFC1-202ENST00000369984 RUNDC3AQ59EK9 446 aa12.58□□□□□ -0.4
HCFC1-202ENST00000369984 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.58□□□□□ -0.4
HCFC1-202ENST00000369984 SPG21Q9NZD8 308 aa12.58□□□□□ -0.4
HCFC1-202ENST00000369984 ZNF224Q9NZL3 707 aa12.58□□□□□ -0.4
HCFC1-202ENST00000369984 DBTP11182 482 aaKnown RBP12.58□□□□□ -0.4
HCFC1-202ENST00000369984 BCL2L1Q07817 233 aa12.58□□□□□ -0.4
HCFC1-202ENST00000369984 TRIM28Q13263 835 aaKnown RBP12.58□□□□□ -0.4
HCFC1-202ENST00000369984 UBAP2LQ14157 1087 aaKnown RBP12.58□□□□□ -0.4
HCFC1-202ENST00000369984 PTPAQ15257 358 aa12.58□□□□□ -0.4
HCFC1-202ENST00000369984 RBM44Q6ZP01 1051 aaKnown RBP12.58□□□□□ -0.4
HCFC1-202ENST00000369984 C3orf67Q6ZVT6 689 aa12.58□□□□□ -0.4
HCFC1-202ENST00000369984 DEPDC4Q8N2C3 294 aa12.58□□□□□ -0.4
HCFC1-202ENST00000369984 SELENOMQ8WWX9 145 aa12.58□□□□□ -0.4
HCFC1-202ENST00000369984 ZHX1-C8orf76Q96EF9 292 aa12.58□□□□□ -0.4
HCFC1-202ENST00000369984 PTCD3Q96EY7 689 aaKnown RBP12.58□□□□□ -0.4
HCFC1-202ENST00000369984 SSR3Q9UNL2 185 aa12.58□□□□□ -0.4
HCFC1-202ENST00000369984 IRAK3Q9Y616 596 aa12.58□□□□□ -0.4
HCFC1-202ENST00000369984 ASTN2O75129 1339 aaPredicted RBP12.58□□□□□ -0.4
HCFC1-202ENST00000369984 STX16-NPEPL1H3BU86 382 aa12.58□□□□□ -0.4
HCFC1-202ENST00000369984 STX16O14662 325 aa12.58□□□□□ -0.4
HCFC1-202ENST00000369984 PECAM1P16284 738 aaPredicted RBP12.58□□□□□ -0.4
HCFC1-202ENST00000369984 S100A2P29034 98 aa12.58□□□□□ -0.4
HCFC1-202ENST00000369984 MYBPC1Q00872 1141 aa12.58□□□□□ -0.4
HCFC1-202ENST00000369984 AKAP14Q86UN6 197 aa12.58□□□□□ -0.4
HCFC1-202ENST00000369984 TRAPPC5Q8IUR0 188 aa12.58□□□□□ -0.4
HCFC1-202ENST00000369984 KLQ9UEF7 1012 aa12.58□□□□□ -0.4
HCFC1-202ENST00000369984 SNCAIPQ9Y6H5 919 aa12.58□□□□□ -0.4
HCFC1-202ENST00000369984 PIGNO95427 931 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 ITGA2P17301 1181 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 ADSLP30566 484 aaPredicted RBP12.57□□□□□ -0.4
HCFC1-202ENST00000369984 CAPGP40121 348 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 TOB1P50616 345 aaPredicted RBP12.57□□□□□ -0.4
HCFC1-202ENST00000369984 PACS1Q6VY07 963 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 HPS1Q92902 700 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 PLCL2Q9UPR0 1127 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 CST1P01037 141 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 DGKAP23743 735 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 AENQ8WTP8 325 aaKnown RBP12.57□□□□□ -0.4
HCFC1-202ENST00000369984 ART5Q96L15 291 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 SPATA5L1Q9BVQ7 753 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 C3orf18Q9UK00 162 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 MTF2Q9Y483 593 aaPredicted RBP12.57□□□□□ -0.4
HCFC1-202ENST00000369984 ABCA9Q8IUA7 1624 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 KCNQ2O43526 872 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 KRT33AO76009 404 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 POMCP01189 267 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 NTRK1P04629 796 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 YBX3P16989 372 aaKnown RBP eCLIP12.57□□□□□ -0.43e-8■■■□□ 18.2
HCFC1-202ENST00000369984 SPIBQ01892 262 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 ZNHIT3Q15649 155 aaPredicted RBP12.57□□□□□ -0.4
HCFC1-202ENST00000369984 FNBP1LQ5T0N5 605 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 KCNT2Q6UVM3 1135 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 MOXD1Q6UVY6 613 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 KBTBD8Q8NFY9 601 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 ERLEC1Q96DZ1 483 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 VIL1P09327 827 aaKnown RBP12.57□□□□□ -0.4
HCFC1-202ENST00000369984 RFX4Q33E94 735 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 FNDC3BQ53EP0 1204 aaKnown RBP12.57□□□□□ -0.4
HCFC1-202ENST00000369984 OVOS1Q6IE37 1185 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 ZNF606Q8WXB4 792 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 ZFP14Q9HCL3 533 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 VPS4AQ9UN37 437 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 BAIAP2Q9UQB8 552 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 KCNK1O00180 336 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 ERCC2P18074 760 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 NFKB1P19838 968 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 NFE2Q16621 373 aaPredicted RBP12.57□□□□□ -0.4
HCFC1-202ENST00000369984 SPDYCQ5MJ68 293 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 BRINP3Q76B58 766 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 CCDC36Q8IYA8 594 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 RARAP10276 462 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 GTF2A2P52657 109 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 GPR107Q5VW38 600 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 C16orf46Q6P387 395 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 SV2AQ7L0J3 742 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 MTMR8Q96EF0 704 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 ATP13A1Q9HD20 1204 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 SLC35C2Q9NQQ7 365 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 CHADO15335 359 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 CCNCP24863 283 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 IL12AP29459 219 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 RPL4P36578 427 aaKnown RBP12.57□□□□□ -0.4
HCFC1-202ENST00000369984 RPS6KA3P51812 740 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 MAPKAPK3Q16644 382 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 FUKQ8N0W3 1084 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 LEMD2Q8NC56 503 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 ELMO3Q96BJ8 720 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 QRFPRQ96P65 431 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 WDR12Q9GZL7 423 aaKnown RBP12.57□□□□□ -0.4
HCFC1-202ENST00000369984 TKTL2Q9H0I9 626 aa12.57□□□□□ -0.4
HCFC1-202ENST00000369984 CSDE1O75534 798 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms