RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 ACBD5Q5T8D3 534 aaPredicted RBP10.54□□□□□ -0.72
CLRN3-201ENST00000368671 NAA35Q5VZE5 725 aa10.54□□□□□ -0.72
CLRN3-201ENST00000368671 KIAA1161Q6NSJ0 714 aa10.54□□□□□ -0.72
CLRN3-201ENST00000368671 DPY19L2P1Q6NXN4 242 aa10.54□□□□□ -0.72
CLRN3-201ENST00000368671 ZNF783Q6ZMS7 281 aa10.54□□□□□ -0.72
CLRN3-201ENST00000368671 PARS2Q7L3T8 475 aaKnown RBP10.54□□□□□ -0.72
CLRN3-201ENST00000368671 PKD1L2Q7Z442 2459 aa10.54□□□□□ -0.72
CLRN3-201ENST00000368671 ABI3BPQ7Z7G0 1075 aa10.54□□□□□ -0.72
CLRN3-201ENST00000368671 NOP9Q86U38 636 aaKnown RBP10.54□□□□□ -0.72
CLRN3-201ENST00000368671 PCDH20Q8N6Y1 951 aaKnown RBP10.54□□□□□ -0.72
CLRN3-201ENST00000368671 EMC1Q8N766 993 aa10.54□□□□□ -0.72
CLRN3-201ENST00000368671 MSANTD4Q8NCY6 345 aa10.54□□□□□ -0.72
CLRN3-201ENST00000368671 OR6K2Q8NGY2 324 aa10.54□□□□□ -0.72
CLRN3-201ENST00000368671 CPA5Q8WXQ8 436 aa10.54□□□□□ -0.72
CLRN3-201ENST00000368671 NAF1Q96HR8 494 aaKnown RBP10.54□□□□□ -0.72
CLRN3-201ENST00000368671 BMFQ96LC9 184 aa10.54□□□□□ -0.72
CLRN3-201ENST00000368671 HAPLN3Q96S86 360 aa10.54□□□□□ -0.72
CLRN3-201ENST00000368671 LGMNQ99538 433 aa10.54□□□□□ -0.72
CLRN3-201ENST00000368671 SLC17A9Q9BYT1 436 aa10.54□□□□□ -0.72
CLRN3-201ENST00000368671 TM6SF2Q9BZW4 377 aa10.54□□□□□ -0.72
CLRN3-201ENST00000368671 CEP44Q9C0F1 390 aa10.54□□□□□ -0.72
CLRN3-201ENST00000368671 OSBPL2Q9H1P3 480 aa10.54□□□□□ -0.72
CLRN3-201ENST00000368671 NLGN3Q9NZ94 848 aa10.54□□□□□ -0.72
CLRN3-201ENST00000368671 IPO11Q9UI26 975 aaKnown RBP10.54□□□□□ -0.72
CLRN3-201ENST00000368671 FADS3Q9Y5Q0 445 aa10.54□□□□□ -0.72
CLRN3-201ENST00000368671 DMXL2Q8TDJ6 3036 aa10.54□□□□□ -0.72
CLRN3-201ENST00000368671 POM121BA6NF01 834 aa10.53□□□□□ -0.72
CLRN3-201ENST00000368671 NEMP2A6NFY4 417 aa10.53□□□□□ -0.72
CLRN3-201ENST00000368671 K7ESM1 405 aa10.53□□□□□ -0.72
CLRN3-201ENST00000368671 OPA1O60313 960 aa10.53□□□□□ -0.72
CLRN3-201ENST00000368671 CSO75390 466 aaKnown RBP10.53□□□□□ -0.72
CLRN3-201ENST00000368671 ZMPSTE24O75844 475 aa10.53□□□□□ -0.72
CLRN3-201ENST00000368671 MPOP05164 745 aa10.53□□□□□ -0.72
CLRN3-201ENST00000368671 GKP32189 559 aa10.53□□□□□ -0.72
CLRN3-201ENST00000368671 ACVRL1P37023 503 aa10.53□□□□□ -0.72
CLRN3-201ENST00000368671 RPIAP49247 311 aa10.53□□□□□ -0.72
CLRN3-201ENST00000368671 DUSP3P51452 185 aaPredicted RBP10.53□□□□□ -0.72
CLRN3-201ENST00000368671 HNRNPKP61978 463 aaKnown RBP eCLIP10.53□□□□□ -0.72
CLRN3-201ENST00000368671 NOMO3P69849 1222 aa10.53□□□□□ -0.72
CLRN3-201ENST00000368671 CXADRP78310 365 aa10.53□□□□□ -0.72
CLRN3-201ENST00000368671 SLC20A2Q08357 652 aa10.53□□□□□ -0.72
CLRN3-201ENST00000368671 C19orf57Q0VDD7 668 aa10.53□□□□□ -0.72
CLRN3-201ENST00000368671 RAB6CQ53S08 254 aa10.53□□□□□ -0.72
CLRN3-201ENST00000368671 ARTNQ5T4W7 220 aa10.53□□□□□ -0.72
CLRN3-201ENST00000368671 KLHDC7AQ5VTJ3 777 aa10.53□□□□□ -0.72
CLRN3-201ENST00000368671 DESI1Q6ICB0 168 aa10.53□□□□□ -0.72
CLRN3-201ENST00000368671 KYAT3Q6YP21 454 aaKnown RBP10.53□□□□□ -0.72
CLRN3-201ENST00000368671 PHLDB2Q86SQ0 1253 aa10.53□□□□□ -0.72
CLRN3-201ENST00000368671 DCP2Q8IU60 420 aaKnown RBP10.53□□□□□ -0.72
CLRN3-201ENST00000368671 FAM174AQ8TBP5 190 aa10.53□□□□□ -0.72
CLRN3-201ENST00000368671 IFI44Q8TCB0 444 aa10.53□□□□□ -0.72
CLRN3-201ENST00000368671 IFT43Q96FT9 208 aa10.53□□□□□ -0.72
CLRN3-201ENST00000368671 FEM1CQ96JP0 617 aa10.53□□□□□ -0.72
CLRN3-201ENST00000368671 DEPDC7Q96QD5 511 aa10.53□□□□□ -0.72
CLRN3-201ENST00000368671 RAB6CQ9H0N0 254 aa10.53□□□□□ -0.72
CLRN3-201ENST00000368671 ABCG4Q9H172 646 aa10.53□□□□□ -0.72
CLRN3-201ENST00000368671 EVA1BQ9NVM1 165 aa10.53□□□□□ -0.72
CLRN3-201ENST00000368671 ZNF212Q9UDV6 495 aa10.53□□□□□ -0.72
CLRN3-201ENST00000368671 DNAI1Q9UI46 699 aa10.53□□□□□ -0.72
CLRN3-201ENST00000368671 TMEM59LQ9UK28 342 aa10.53□□□□□ -0.72
CLRN3-201ENST00000368671 ITM2BQ9Y287 266 aa10.53□□□□□ -0.72
CLRN3-201ENST00000368671 HS3ST3A1Q9Y663 406 aa10.53□□□□□ -0.72
CLRN3-201ENST00000368671 CABIN1Q9Y6J0 2220 aa10.53□□□□□ -0.72
CLRN3-201ENST00000368671 FREM2Q5SZK8 3169 aa10.52□□□□□ -0.73
CLRN3-201ENST00000368671 LY6G6EA0A0G2JKS1 128 aa10.52□□□□□ -0.73
CLRN3-201ENST00000368671 IGLON5A6NGN9 336 aa10.52□□□□□ -0.73
CLRN3-201ENST00000368671 H3BM21 787 aa10.52□□□□□ -0.73
CLRN3-201ENST00000368671 NEMP1O14524 444 aa10.52□□□□□ -0.73
CLRN3-201ENST00000368671 FPGTO14772 594 aa10.52□□□□□ -0.73
CLRN3-201ENST00000368671 SCAMP1O15126 338 aa10.52□□□□□ -0.73
CLRN3-201ENST00000368671 ATXN7O15265 892 aaPredicted RBP10.52□□□□□ -0.73
CLRN3-201ENST00000368671 USP12O75317 370 aa10.52□□□□□ -0.73
CLRN3-201ENST00000368671 LSM8O95777 96 aaKnown RBP10.52□□□□□ -0.73
CLRN3-201ENST00000368671 CD160O95971 181 aa10.52□□□□□ -0.73
CLRN3-201ENST00000368671 CSF2P04141 144 aa10.52□□□□□ -0.73
CLRN3-201ENST00000368671 ABL2P42684 1182 aa10.52□□□□□ -0.73
CLRN3-201ENST00000368671 RABIFP47224 123 aa10.52□□□□□ -0.73
CLRN3-201ENST00000368671 GABREP78334 506 aa10.52□□□□□ -0.73
CLRN3-201ENST00000368671 SGCGQ13326 291 aa10.52□□□□□ -0.73
CLRN3-201ENST00000368671 PDE1CQ14123 709 aaPredicted RBP10.52□□□□□ -0.73
CLRN3-201ENST00000368671 FZD2Q14332 565 aa10.52□□□□□ -0.73
CLRN3-201ENST00000368671 CDKN3Q16667 212 aa10.52□□□□□ -0.73
CLRN3-201ENST00000368671 C15orf59Q2T9L4 293 aaPredicted RBP10.52□□□□□ -0.73
CLRN3-201ENST00000368671 DPCR1Q3MIW9 517 aa10.52□□□□□ -0.73
CLRN3-201ENST00000368671 CDCP2Q5VXM1 449 aa10.52□□□□□ -0.73
CLRN3-201ENST00000368671 RWDD4Q6NW29 188 aaKnown RBP10.52□□□□□ -0.73
CLRN3-201ENST00000368671 LEKR1Q6ZMV7 388 aa10.52□□□□□ -0.73
CLRN3-201ENST00000368671 GPR155Q7Z3F1 870 aa10.52□□□□□ -0.73
CLRN3-201ENST00000368671 BNIPLQ7Z465 357 aa10.52□□□□□ -0.73
CLRN3-201ENST00000368671 PARGQ86W56 976 aa10.52□□□□□ -0.73
CLRN3-201ENST00000368671 SPACA3Q8IXA5 215 aa10.52□□□□□ -0.73
CLRN3-201ENST00000368671 ZNF248Q8NDW4 579 aa10.52□□□□□ -0.73
CLRN3-201ENST00000368671 ZNF548Q8NEK5 533 aaPredicted RBP10.52□□□□□ -0.73
CLRN3-201ENST00000368671 PRR7Q8TB68 274 aa10.52□□□□□ -0.73
CLRN3-201ENST00000368671 MAPK15Q8TD08 544 aa10.52□□□□□ -0.73
CLRN3-201ENST00000368671 LMX1AQ8TE12 382 aa10.52□□□□□ -0.73
CLRN3-201ENST00000368671 EPS8L1Q8TE68 723 aa10.52□□□□□ -0.73
CLRN3-201ENST00000368671 SLC20A1Q8WUM9 679 aa10.52□□□□□ -0.73
CLRN3-201ENST00000368671 DUSP23Q9BVJ7 150 aa10.52□□□□□ -0.73
CLRN3-201ENST00000368671 NAA15Q9BXJ9 866 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms