RNA–Protein interactions for RNA: ENST00000368205.7

PTPRK-202, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 662 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-202ENST00000368205 MMP3P08254 477 aa4.1□□□□□ -1.75
PTPRK-202ENST00000368205 ANOS1P23352 680 aa4.1□□□□□ -1.75
PTPRK-202ENST00000368205 PRPH2P23942 346 aa4.1□□□□□ -1.75
PTPRK-202ENST00000368205 CXCR3P49682 368 aa4.1□□□□□ -1.75
PTPRK-202ENST00000368205 TMF1P82094 1093 aa4.1□□□□□ -1.75
PTPRK-202ENST00000368205 RNASELQ05823 741 aaKnown RBP4.1□□□□□ -1.75
PTPRK-202ENST00000368205 SF3B4Q15427 424 aaKnown RBP eCLIP4.1□□□□□ -1.75
PTPRK-202ENST00000368205 ZACNQ401N2 412 aa4.1□□□□□ -1.75
PTPRK-202ENST00000368205 TRIM60Q495X7 471 aa4.1□□□□□ -1.75
PTPRK-202ENST00000368205 EXOC3L1Q86VI1 746 aa4.1□□□□□ -1.75
PTPRK-202ENST00000368205 RSC1A1Q92681 617 aa4.1□□□□□ -1.75
PTPRK-202ENST00000368205 FRAT1Q92837 279 aaPredicted RBP4.1□□□□□ -1.75
PTPRK-202ENST00000368205 IL17FQ96PD4 163 aa4.1□□□□□ -1.75
PTPRK-202ENST00000368205 MMP24Q9Y5R2 645 aa4.1□□□□□ -1.75
PTPRK-202ENST00000368205 PREX2Q70Z35 1606 aa4.1□□□□□ -1.75
PTPRK-202ENST00000368205 RNF17Q9BXT8 1623 aaKnown RBP4.1□□□□□ -1.75
PTPRK-202ENST00000368205 EIF2AK4Q9P2K8 1649 aaKnown RBP4.1□□□□□ -1.75
PTPRK-202ENST00000368205 IQGAP1P46940 1657 aa4.1□□□□□ -1.75
PTPRK-202ENST00000368205 IGLV5-37A0A075B6J1 123 aa4.09□□□□□ -1.75
PTPRK-202ENST00000368205 A0A0U1RQJ8 604 aa4.09□□□□□ -1.75
PTPRK-202ENST00000368205 EYA2O00167 538 aa4.09□□□□□ -1.75
PTPRK-202ENST00000368205 ITM2AO43736 263 aa4.09□□□□□ -1.75
PTPRK-202ENST00000368205 KRTAP5-9P26371 169 aa4.09□□□□□ -1.75
PTPRK-202ENST00000368205 TYK2P29597 1187 aa4.09□□□□□ -1.75
PTPRK-202ENST00000368205 AKT1P31749 480 aa4.09□□□□□ -1.75
PTPRK-202ENST00000368205 MXI1P50539 228 aa4.09□□□□□ -1.75
PTPRK-202ENST00000368205 CLCNKBP51801 687 aa4.09□□□□□ -1.75
PTPRK-202ENST00000368205 RCAN1P53805 252 aa4.09□□□□□ -1.75
PTPRK-202ENST00000368205 MPEG1Q2M385 716 aa4.09□□□□□ -1.75
PTPRK-202ENST00000368205 PMS2CLQ68D20 193 aa4.09□□□□□ -1.75
PTPRK-202ENST00000368205 SERPINA11Q86U17 422 aa4.09□□□□□ -1.75
PTPRK-202ENST00000368205 LMNTD1Q8N9Z9 388 aa4.09□□□□□ -1.75
PTPRK-202ENST00000368205 FAR1Q8WVX9 515 aa4.09□□□□□ -1.75
PTPRK-202ENST00000368205 TAF15Q92804 592 aaKnown RBP eCLIP4.09□□□□□ -1.75
PTPRK-202ENST00000368205 HDHD5Q9BXW7 423 aa4.09□□□□□ -1.75
PTPRK-202ENST00000368205 ABHD16BQ9H3Z7 469 aa4.09□□□□□ -1.75
PTPRK-202ENST00000368205 SLC22A11Q9NSA0 550 aa4.09□□□□□ -1.75
PTPRK-202ENST00000368205 OSGIN2Q9Y236 505 aa4.09□□□□□ -1.75
PTPRK-202ENST00000368205 CEP83Q9Y592 693 aa4.09□□□□□ -1.75
PTPRK-202ENST00000368205 SAA2-SAA4A0A096LPE2 208 aa4.08□□□□□ -1.76
PTPRK-202ENST00000368205 MAGEA13PA6NCF6 341 aa4.08□□□□□ -1.76
PTPRK-202ENST00000368205 PLXNC1O60486 1568 aa4.08□□□□□ -1.76
PTPRK-202ENST00000368205 FRAT2O75474 233 aaPredicted RBP4.08□□□□□ -1.76
PTPRK-202ENST00000368205 PIK3C2GO75747 1445 aa4.08□□□□□ -1.76
PTPRK-202ENST00000368205 PAK4O96013 591 aaPredicted RBP4.08□□□□□ -1.76
PTPRK-202ENST00000368205 IGHDP01880 384 aa4.08□□□□□ -1.76
PTPRK-202ENST00000368205 SERPINB2P05120 415 aa4.08□□□□□ -1.76
PTPRK-202ENST00000368205 GM2AP17900 193 aa4.08□□□□□ -1.76
PTPRK-202ENST00000368205 TM4SF4P48230 202 aa4.08□□□□□ -1.76
PTPRK-202ENST00000368205 HSPA7P48741 367 aa4.08□□□□□ -1.76
PTPRK-202ENST00000368205 CDK7P50613 346 aa4.08□□□□□ -1.76
PTPRK-202ENST00000368205 MYBPC2Q14324 1141 aa4.08□□□□□ -1.76
PTPRK-202ENST00000368205 SAFBQ15424 915 aaKnown RBP eCLIP4.08□□□□□ -1.76
PTPRK-202ENST00000368205 SYTL3Q4VX76 610 aa4.08□□□□□ -1.76
PTPRK-202ENST00000368205 VIRMAQ69YN4 1812 aaKnown RBP4.08□□□□□ -1.76
PTPRK-202ENST00000368205 RETSATQ6NUM9 610 aa4.08□□□□□ -1.76
PTPRK-202ENST00000368205 ASXL1Q8IXJ9 1541 aa4.08□□□□□ -1.76
PTPRK-202ENST00000368205 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.08□□□□□ -1.76
PTPRK-202ENST00000368205 POC1AQ8NBT0 407 aa4.08□□□□□ -1.76
PTPRK-202ENST00000368205 ZNF114Q8NC26 417 aa4.08□□□□□ -1.76
PTPRK-202ENST00000368205 IPO4Q8TEX9 1081 aaKnown RBP4.08□□□□□ -1.76
PTPRK-202ENST00000368205 BICD1Q96G01 975 aa4.08□□□□□ -1.76
PTPRK-202ENST00000368205 SARGQ9BW04 601 aa4.08□□□□□ -1.76
PTPRK-202ENST00000368205 NAA15Q9BXJ9 866 aaKnown RBP4.08□□□□□ -1.76
PTPRK-202ENST00000368205 STK33Q9BYT3 514 aa4.08□□□□□ -1.76
PTPRK-202ENST00000368205 LIN7CQ9NUP9 197 aaKnown RBP4.08□□□□□ -1.76
PTPRK-202ENST00000368205 NPC1L1Q9UHC9 1359 aa4.08□□□□□ -1.76
PTPRK-202ENST00000368205 CDH22Q9UJ99 828 aa4.08□□□□□ -1.76
PTPRK-202ENST00000368205 SLC25A13Q9UJS0 675 aa4.08□□□□□ -1.76
PTPRK-202ENST00000368205 KNSTRNQ9Y448 316 aa4.08□□□□□ -1.76
PTPRK-202ENST00000368205 MYOM1P52179 1685 aa4.07□□□□□ -1.76
PTPRK-202ENST00000368205 MADDQ8WXG6 1647 aa4.07□□□□□ -1.76
PTPRK-202ENST00000368205 ABCC2Q92887 1545 aa4.07□□□□□ -1.76
PTPRK-202ENST00000368205 DUOX2Q9NRD8 1548 aa4.07□□□□□ -1.76
PTPRK-202ENST00000368205 SCAPERQ9BY12 1400 aa4.07□□□□□ -1.76
PTPRK-202ENST00000368205 EIF3AQ14152 1382 aaKnown RBP4.07□□□□□ -1.76
PTPRK-202ENST00000368205 FAM90A18PA6NE21 464 aa4.07□□□□□ -1.76
PTPRK-202ENST00000368205 FAM90A16PA6NEW6 464 aa4.07□□□□□ -1.76
PTPRK-202ENST00000368205 AGAP5A6NIR3 686 aa4.07□□□□□ -1.76
PTPRK-202ENST00000368205 FAM90A9PA6NNJ1 464 aa4.07□□□□□ -1.76
PTPRK-202ENST00000368205 FAM90A5PA8MXJ8 464 aa4.07□□□□□ -1.76
PTPRK-202ENST00000368205 TULP2O00295 520 aa4.07□□□□□ -1.76
PTPRK-202ENST00000368205 APAF1O14727 1248 aa4.07□□□□□ -1.76
PTPRK-202ENST00000368205 PIP5K1BO14986 540 aa4.07□□□□□ -1.76
PTPRK-202ENST00000368205 DNPH1O43598 174 aa4.07□□□□□ -1.76
PTPRK-202ENST00000368205 LMX1BO60663 402 aa4.07□□□□□ -1.76
PTPRK-202ENST00000368205 PLA2G6O60733 806 aa4.07□□□□□ -1.76
PTPRK-202ENST00000368205 FAM90A15PP0C7V4 464 aa4.07□□□□□ -1.76
PTPRK-202ENST00000368205 FAM90A14PP0C7W9 464 aa4.07□□□□□ -1.76
PTPRK-202ENST00000368205 AMD1P17707 334 aa4.07□□□□□ -1.76
PTPRK-202ENST00000368205 PCP4P48539 62 aa4.07□□□□□ -1.76
PTPRK-202ENST00000368205 VEGFCP49767 419 aa4.07□□□□□ -1.76
PTPRK-202ENST00000368205 ARL16Q0P5N6 197 aa4.07□□□□□ -1.76
PTPRK-202ENST00000368205 CTTNQ14247 550 aaKnown RBP4.07□□□□□ -1.76
PTPRK-202ENST00000368205 WDR43Q15061 677 aaKnown RBP eCLIP4.07□□□□□ -1.76
PTPRK-202ENST00000368205 TBRG1Q3YBR2 411 aa4.07□□□□□ -1.76
PTPRK-202ENST00000368205 COBLL1Q53SF7 1204 aa4.07□□□□□ -1.76
PTPRK-202ENST00000368205 IZUMO3Q5VZ72 239 aa4.07□□□□□ -1.76
PTPRK-202ENST00000368205 MTFR2Q6P444 385 aa4.07□□□□□ -1.76
PTPRK-202ENST00000368205 PATL1Q86TB9 770 aaKnown RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms