RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 SMTNL2Q2TAL5 461 aa10.02□□□□□ -0.81
CD48-202ENST00000368046 ATP13A4Q4VNC1 1196 aa10.02□□□□□ -0.81
CD48-202ENST00000368046 AGBL4Q5VU57 503 aa10.02□□□□□ -0.81
CD48-202ENST00000368046 AFMIDQ63HM1 303 aa10.02□□□□□ -0.81
CD48-202ENST00000368046 TXNRD3NBQ6F5E7 133 aa10.02□□□□□ -0.81
CD48-202ENST00000368046 ERN2Q76MJ5 926 aaKnown RBP10.02□□□□□ -0.81
CD48-202ENST00000368046 ERMP1Q7Z2K6 904 aa10.02□□□□□ -0.81
CD48-202ENST00000368046 DGLUCYQ7Z3D6 616 aa10.02□□□□□ -0.81
CD48-202ENST00000368046 PRPF39Q86UA1 669 aaKnown RBP10.02□□□□□ -0.81
CD48-202ENST00000368046 RHOT2Q8IXI1 618 aa10.02□□□□□ -0.81
CD48-202ENST00000368046 CCDC170Q8IYT3 715 aa10.02□□□□□ -0.81
CD48-202ENST00000368046 FAM71BQ8TC56 605 aa10.02□□□□□ -0.81
CD48-202ENST00000368046 PPP1R16AQ96I34 528 aa10.02□□□□□ -0.81
CD48-202ENST00000368046 CELF6Q96J87 481 aaKnown RBP10.02□□□□□ -0.81
CD48-202ENST00000368046 HDAC8Q9BY41 377 aa10.02□□□□□ -0.81
CD48-202ENST00000368046 EBF2Q9HAK2 575 aa10.02□□□□□ -0.81
CD48-202ENST00000368046 PCDH18Q9HCL0 1135 aa10.02□□□□□ -0.81
CD48-202ENST00000368046 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.02□□□□□ -0.81
CD48-202ENST00000368046 CKAP5Q14008 2032 aa10.02□□□□□ -0.81
CD48-202ENST00000368046 THADAQ6YHU6 1953 aa10.01□□□□□ -0.81
CD48-202ENST00000368046 SDK1Q7Z5N4 2213 aa10.01□□□□□ -0.81
CD48-202ENST00000368046 RNF103O00237 685 aa10.01□□□□□ -0.81
CD48-202ENST00000368046 PLK4O00444 970 aa10.01□□□□□ -0.81
CD48-202ENST00000368046 LATO43561 262 aa10.01□□□□□ -0.81
CD48-202ENST00000368046 PRAMEF11O60813 436 aa10.01□□□□□ -0.81
CD48-202ENST00000368046 MTA2O94776 668 aa10.01□□□□□ -0.81
CD48-202ENST00000368046 TMCC1O94876 653 aa10.01□□□□□ -0.81
CD48-202ENST00000368046 KRT7P08729 469 aa10.01□□□□□ -0.81
CD48-202ENST00000368046 NUDT1P36639 197 aa10.01□□□□□ -0.81
CD48-202ENST00000368046 MAGEA1P43355 309 aa10.01□□□□□ -0.81
CD48-202ENST00000368046 CSNK1EP49674 416 aaKnown RBP10.01□□□□□ -0.81
CD48-202ENST00000368046 CDH6P55285 790 aa10.01□□□□□ -0.81
CD48-202ENST00000368046 TAS2R38P59533 333 aa10.01□□□□□ -0.81
CD48-202ENST00000368046 RHOAP61586 193 aa10.01□□□□□ -0.81
CD48-202ENST00000368046 RACK1P63244 317 aaKnown RBP10.01□□□□□ -0.81
CD48-202ENST00000368046 IL10RBQ08334 325 aa10.01□□□□□ -0.81
CD48-202ENST00000368046 NSUN2Q08J23 767 aaKnown RBP eCLIP10.01□□□□□ -0.81
CD48-202ENST00000368046 SLC14A1Q13336 389 aa10.01□□□□□ -0.81
CD48-202ENST00000368046 DPYSQ14117 519 aa10.01□□□□□ -0.81
CD48-202ENST00000368046 MESDQ14696 234 aa10.01□□□□□ -0.81
CD48-202ENST00000368046 PDK2Q15119 407 aa10.01□□□□□ -0.81
CD48-202ENST00000368046 TEAD4Q15561 434 aa10.01□□□□□ -0.81
CD48-202ENST00000368046 POM121L1PQ3SYA9 428 aa10.01□□□□□ -0.81
CD48-202ENST00000368046 PIP5KL1Q5T9C9 394 aa10.01□□□□□ -0.81
CD48-202ENST00000368046 FBXL19Q6PCT2 694 aa10.01□□□□□ -0.81
CD48-202ENST00000368046 MAP7D3Q8IWC1 876 aa10.01□□□□□ -0.81
CD48-202ENST00000368046 ARHGAP12Q8IWW6 846 aa10.01□□□□□ -0.81
CD48-202ENST00000368046 RYBPQ8N488 228 aaPredicted RBP10.01□□□□□ -0.81
CD48-202ENST00000368046 ZCCHC9Q8N567 271 aaKnown RBP10.01□□□□□ -0.81
CD48-202ENST00000368046 KCTD6Q8NC69 237 aa10.01□□□□□ -0.81
CD48-202ENST00000368046 SNX19Q92543 992 aa10.01□□□□□ -0.81
CD48-202ENST00000368046 ARRDC3Q96B67 414 aa10.01□□□□□ -0.81
CD48-202ENST00000368046 CSPG4P5Q96PW8 444 aa10.01□□□□□ -0.81
CD48-202ENST00000368046 PANX2Q96RD6 677 aa10.01□□□□□ -0.81
CD48-202ENST00000368046 ORAI3Q9BRQ5 295 aa10.01□□□□□ -0.81
CD48-202ENST00000368046 GTPBP2Q9BX10 602 aaKnown RBP10.01□□□□□ -0.81
CD48-202ENST00000368046 CPEB1Q9BZB8 566 aaKnown RBP10.01□□□□□ -0.81
CD48-202ENST00000368046 TM6SF2Q9BZW4 377 aa10.01□□□□□ -0.81
CD48-202ENST00000368046 PREBQ9HCU5 417 aa10.01□□□□□ -0.81
CD48-202ENST00000368046 TM9SF3Q9HD45 589 aa10.01□□□□□ -0.81
CD48-202ENST00000368046 RCOR3Q9P2K3 495 aaPredicted RBP10.01□□□□□ -0.81
CD48-202ENST00000368046 UBA2Q9UBT2 640 aaPredicted RBP10.01□□□□□ -0.81
CD48-202ENST00000368046 IPO11Q9UI26 975 aaKnown RBP10.01□□□□□ -0.81
CD48-202ENST00000368046 MFHAS1Q9Y4C4 1052 aa10.01□□□□□ -0.81
CD48-202ENST00000368046 PLXND1Q9Y4D7 1925 aa10□□□□□ -0.81
CD48-202ENST00000368046 C16orf96A6NNT2 1141 aa10□□□□□ -0.81
CD48-202ENST00000368046 DFFAO00273 331 aa10□□□□□ -0.81
CD48-202ENST00000368046 KRIT1O00522 736 aa10□□□□□ -0.81
CD48-202ENST00000368046 OPHN1O60890 802 aa10□□□□□ -0.81
CD48-202ENST00000368046 PALMO75781 387 aa10□□□□□ -0.81
CD48-202ENST00000368046 LCA5LO95447 670 aa10□□□□□ -0.81
CD48-202ENST00000368046 GKP32189 559 aa10□□□□□ -0.81
CD48-202ENST00000368046 MAN1A1P33908 653 aa10□□□□□ -0.81
CD48-202ENST00000368046 CYLC1P35663 651 aaPredicted RBP10□□□□□ -0.81
CD48-202ENST00000368046 MAPK8P45983 427 aa10□□□□□ -0.81
CD48-202ENST00000368046 GRIA4P48058 902 aa10□□□□□ -0.81
CD48-202ENST00000368046 CSNK1DP48730 415 aa10□□□□□ -0.81
CD48-202ENST00000368046 ARSEP51690 589 aa10□□□□□ -0.81
CD48-202ENST00000368046 NEK3P51956 506 aa10□□□□□ -0.81
CD48-202ENST00000368046 TAS2R40P59535 323 aa10□□□□□ -0.81
CD48-202ENST00000368046 FOXK2Q01167 660 aa10□□□□□ -0.81
CD48-202ENST00000368046 KRT81Q14533 505 aa10□□□□□ -0.81
CD48-202ENST00000368046 RFTN1Q14699 578 aaPredicted RBP10□□□□□ -0.81
CD48-202ENST00000368046 UAP1L1Q3KQV9 507 aa10□□□□□ -0.81
CD48-202ENST00000368046 ZNF805Q5CZA5 627 aa10□□□□□ -0.81
CD48-202ENST00000368046 IL27RAQ6UWB1 636 aa10□□□□□ -0.81
CD48-202ENST00000368046 TMCO3Q6UWJ1 677 aa10□□□□□ -0.81
CD48-202ENST00000368046 GDPD4Q6W3E5 623 aa10□□□□□ -0.81
CD48-202ENST00000368046 TRIM69Q86WT6 500 aa10□□□□□ -0.81
CD48-202ENST00000368046 TMTC1Q8IUR5 882 aa10□□□□□ -0.81
CD48-202ENST00000368046 LRRC49Q8IUZ0 686 aa10□□□□□ -0.81
CD48-202ENST00000368046 MINDY1Q8N5J2 469 aa10□□□□□ -0.81
CD48-202ENST00000368046 GRIN3AQ8TCU5 1115 aa10□□□□□ -0.81
CD48-202ENST00000368046 HCAR2Q8TDS4 363 aa10□□□□□ -0.81
CD48-202ENST00000368046 RFFLQ8WZ73 363 aa10□□□□□ -0.81
CD48-202ENST00000368046 TSC1Q92574 1164 aa10□□□□□ -0.81
CD48-202ENST00000368046 RAB7BQ96AH8 199 aa10□□□□□ -0.81
CD48-202ENST00000368046 VOPP1Q96AW1 172 aa10□□□□□ -0.81
CD48-202ENST00000368046 SKA1Q96BD8 255 aa10□□□□□ -0.81
CD48-202ENST00000368046 FEM1CQ96JP0 617 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms