RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 SCUBE2Q9NQ36 999 aa7.38□□□□□ -1.23
VTA1-202ENST00000367630 FAM49BQ9NUQ9 324 aa7.38□□□□□ -1.23
VTA1-202ENST00000367630 IFT80Q9P2H3 777 aaPredicted RBP7.38□□□□□ -1.23
VTA1-202ENST00000367630 CDH22Q9UJ99 828 aa7.38□□□□□ -1.23
VTA1-202ENST00000367630 TAF1LQ8IZX4 1826 aa7.38□□□□□ -1.23
VTA1-202ENST00000367630 BTBD19C9JJ37 291 aa7.38□□□□□ -1.23
VTA1-202ENST00000367630 STX7O15400 261 aaKnown RBP7.38□□□□□ -1.23
VTA1-202ENST00000367630 SUPT7LO94864 414 aa7.38□□□□□ -1.23
VTA1-202ENST00000367630 LATS1O95835 1130 aa7.38□□□□□ -1.23
VTA1-202ENST00000367630 CYP2A6P11509 494 aaPredicted RBP7.38□□□□□ -1.23
VTA1-202ENST00000367630 NME5P56597 212 aa7.38□□□□□ -1.23
VTA1-202ENST00000367630 PSME3P61289 254 aa7.38□□□□□ -1.23
VTA1-202ENST00000367630 TXNL4AP83876 142 aaKnown RBP7.38□□□□□ -1.23
VTA1-202ENST00000367630 KLF10Q13118 480 aa7.38□□□□□ -1.23
VTA1-202ENST00000367630 KRT73Q86Y46 540 aa7.38□□□□□ -1.23
VTA1-202ENST00000367630 FBXO39Q8N4B4 442 aa7.38□□□□□ -1.23
VTA1-202ENST00000367630 STYXQ8WUJ0 223 aa7.38□□□□□ -1.23
VTA1-202ENST00000367630 VPS50Q96JG6 964 aa7.38□□□□□ -1.23
VTA1-202ENST00000367630 FEM1CQ96JP0 617 aa7.38□□□□□ -1.23
VTA1-202ENST00000367630 NSMCE2Q96MF7 247 aa7.38□□□□□ -1.23
VTA1-202ENST00000367630 ZCCHC2Q9C0B9 1178 aaKnown RBP7.38□□□□□ -1.23
VTA1-202ENST00000367630 CASS4Q9NQ75 786 aa7.38□□□□□ -1.23
VTA1-202ENST00000367630 CATSPERZQ9NTU4 200 aa7.38□□□□□ -1.23
VTA1-202ENST00000367630 TCAF1Q9Y4C2 921 aa7.38□□□□□ -1.23
VTA1-202ENST00000367630 UBR3Q6ZT12 1888 aa7.38□□□□□ -1.23
VTA1-202ENST00000367630 FZD9O00144 591 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 RAMP2O60895 175 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 EFCAB14O75071 495 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 ZNF12P17014 697 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 RNF219Q5W0B1 726 aaPredicted RBP7.37□□□□□ -1.23
VTA1-202ENST00000367630 RETSATQ6NUM9 610 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 MON1AQ86VX9 555 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 CENPLQ8N0S6 344 aaPredicted RBP7.37□□□□□ -1.23
VTA1-202ENST00000367630 NR4A3Q92570 626 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 FCGR1BQ92637 280 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 C19orf43Q9BQ61 176 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 CD274Q9NZQ7 290 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 ADAM30Q9UKF2 790 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 AK5Q9Y6K8 562 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 EPOP01588 193 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 ITGA2P17301 1181 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 S100A5P33763 92 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 SMIM11AP58511 58 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 GTF2H3Q13889 308 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 HNRNPDQ14103 355 aaKnown RBP7.37□□□□□ -1.23
VTA1-202ENST00000367630 BROXQ5VW32 411 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 CYP4Z1Q86W10 505 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 SNX31Q8N9S9 440 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 SEPT8Q92599 483 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 PLD4Q96BZ4 506 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 ASB9Q96DX5 294 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 CCDC97Q96F63 343 aaPredicted RBP7.37□□□□□ -1.23
VTA1-202ENST00000367630 C1orf74Q96LT6 269 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 TINF2Q9BSI4 451 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 FBXW11Q9UKB1 542 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 R3HDM2Q9Y2K5 976 aaKnown RBP7.37□□□□□ -1.23
VTA1-202ENST00000367630 HPRP00739 348 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 ETS1P14921 441 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 CPB1P15086 417 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 YBX3P16989 372 aaKnown RBP eCLIP7.37□□□□□ -1.231e-7■■■■□ 23.4
VTA1-202ENST00000367630 CYP2A7P20853 494 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 IVDP26440 423 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 IL10RBQ08334 325 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 ATP13A4Q4VNC1 1196 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 MDH1BQ5I0G3 518 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 C1orf127Q8N9H9 656 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 SPPL2BQ8TCT7 592 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 TMA16Q96EY4 203 aaKnown RBP7.37□□□□□ -1.23
VTA1-202ENST00000367630 CEP19Q96LK0 163 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 KCTD15Q96SI1 283 aaPredicted RBP7.37□□□□□ -1.23
VTA1-202ENST00000367630 SPATA16Q9BXB7 569 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 COL20A1Q9P218 1284 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.37□□□□□ -1.23
VTA1-202ENST00000367630 NRXN2Q9P2S2 1712 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 PEX11AO75192 247 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 ENDOD1O94919 500 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 SCELO95171 688 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 PFKLP17858 780 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 SOX6P35712 828 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 RPL7AP62424 266 aaKnown RBP7.37□□□□□ -1.23
VTA1-202ENST00000367630 MPP1Q00013 466 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 NFYCQ13952 458 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 SLC39A4Q6P5W5 647 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 ANKS3Q6ZW76 656 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 DHRSXQ8N5I4 330 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 FAM162AQ96A26 154 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 QRFPRQ96P65 431 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 HMG20AQ9NP66 347 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 HPS4Q9NQG7 708 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 USE1Q9NZ43 259 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 AJAP1Q9UKB5 411 aaPredicted RBP7.37□□□□□ -1.23
VTA1-202ENST00000367630 SIN3BO75182 1162 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 OTCP00480 354 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 MMP3P08254 477 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 GRIA2P42262 883 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 PRMT2P55345 433 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 POLD3Q15054 466 aaPredicted RBP7.37□□□□□ -1.23
VTA1-202ENST00000367630 SLC1A5Q15758 541 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 DGUOKQ16854 277 aa7.37□□□□□ -1.23
VTA1-202ENST00000367630 C1orf220Q5T0J3 134 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms