RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 POU5F2Q8N7G0 328 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 SLC26A7Q8TE54 656 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 WDR60Q8WVS4 1066 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 PABPC5Q96DU9 382 aaKnown RBP9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 C1orf74Q96LT6 269 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 ZNF184Q99676 751 aaPredicted RBP9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 RTKNQ9BST9 563 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 TMEM30AQ9NV96 361 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 SLC7A8Q9UHI5 535 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 RP1L1Q8IWN7 2480 aaPredicted RBP9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 LOC100653049A0A140TA62 436 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 A0A1W2PQH9 124 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 TTC36A6NLP5 189 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 MAFKO60675 156 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 KRT34O76011 436 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 RTN3O95197 1032 aaPredicted RBP9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 MT-CYBP00156 380 aaPredicted RBP9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 RBP1P09455 135 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 COX4I1P13073 169 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 ANPEPP15144 967 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 ARL1P40616 181 aaPredicted RBP9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 SERPINH1P50454 418 aaKnown RBP9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 SLC25A3Q00325 362 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 IRF9Q00978 393 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 DSG1Q02413 1049 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 USP4Q13107 963 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 MAPRE2Q15555 327 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 DLG2Q15700 870 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 KCNA10Q16322 511 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 C11orf91Q3C1V1 193 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 RABGAP1LQ5R372 815 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 ZNF280DQ6N043 979 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 BHLHA9Q7RTU4 235 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 CNTD1Q8N815 330 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 KCTD4Q8WVF5 259 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 CASP10Q92851 521 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 ZNF333Q96JL9 665 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 CCDC28BQ9BUN5 200 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 MRPL40Q9NQ50 206 aaKnown RBP9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 FBXO5Q9UKT4 447 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 CACNG3O60359 315 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 TBX10O75333 385 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 ALDH1A1P00352 501 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 PDHA1P08559 390 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 HOXB8P17481 243 aaPredicted RBP9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 FLT3LGP49771 235 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 NAGLUP54802 743 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 WNT3AP56704 352 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 TBL3Q12788 808 aaKnown RBP9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 ART3Q13508 389 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 DSC3Q14574 896 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 NOMO2Q5JPE7 1267 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 CNTN4Q8IWV2 1026 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 DEFB107AQ8IZN7 70 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 MIEF2Q96C03 454 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 IFT43Q96FT9 208 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 GLT1D1Q96MS3 346 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 NT5MQ9NPB1 228 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 TMLHEQ9NVH6 421 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 GTSE1Q9NYZ3 720 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 XPR1Q9UBH6 696 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 SCML2Q9UQR0 700 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 SSX2IPQ9Y2D8 614 aa9.42□□□□□ -0.9
GTF3C2-202ENST00000359541 KCNU1A8MYU2 1149 aa9.41□□□□□ -0.9
GTF3C2-202ENST00000359541 G3V2L1 256 aa9.41□□□□□ -0.9
GTF3C2-202ENST00000359541 I6L893 689 aaPredicted RBP9.41□□□□□ -0.9
GTF3C2-202ENST00000359541 NEMP1O14524 444 aa9.41□□□□□ -0.9
GTF3C2-202ENST00000359541 GSRP00390 522 aa9.41□□□□□ -0.9
GTF3C2-202ENST00000359541 HLA-DQB2P05538 268 aa9.41□□□□□ -0.9
GTF3C2-202ENST00000359541 ATP5F1P24539 256 aaPredicted RBP9.41□□□□□ -0.9
GTF3C2-202ENST00000359541 KPNA1P52294 538 aaPredicted RBP9.41□□□□□ -0.9
GTF3C2-202ENST00000359541 MLLT6P55198 1093 aaPredicted RBP9.41□□□□□ -0.9
GTF3C2-202ENST00000359541 KLF10Q13118 480 aa9.41□□□□□ -0.9
GTF3C2-202ENST00000359541 AP1ARQ63HQ0 302 aa9.41□□□□□ -0.9
GTF3C2-202ENST00000359541 SLC24A5Q71RS6 500 aa9.41□□□□□ -0.9
GTF3C2-202ENST00000359541 ARHGAP12Q8IWW6 846 aa9.41□□□□□ -0.9
GTF3C2-202ENST00000359541 SLC25A41Q8N5S1 370 aa9.41□□□□□ -0.9
GTF3C2-202ENST00000359541 ACTRT2Q8TDY3 377 aa9.41□□□□□ -0.9
GTF3C2-202ENST00000359541 FBXO32Q969P5 355 aa9.41□□□□□ -0.9
GTF3C2-202ENST00000359541 CCDC124Q96CT7 223 aaKnown RBP9.41□□□□□ -0.9
GTF3C2-202ENST00000359541 C8orf48Q96LL4 319 aa9.41□□□□□ -0.9
GTF3C2-202ENST00000359541 GORASP1Q9BQQ3 440 aa9.41□□□□□ -0.9
GTF3C2-202ENST00000359541 TLR8Q9NR97 1041 aaKnown RBP9.41□□□□□ -0.9
GTF3C2-202ENST00000359541 PRPF19Q9UMS4 504 aaKnown RBP9.41□□□□□ -0.9
GTF3C2-202ENST00000359541 CEP290O15078 2479 aa9.41□□□□□ -0.9
GTF3C2-202ENST00000359541 TK2O00142 265 aa9.41□□□□□ -0.9
GTF3C2-202ENST00000359541 SYN3O14994 580 aa9.41□□□□□ -0.9
GTF3C2-202ENST00000359541 CA12O43570 354 aa9.41□□□□□ -0.9
GTF3C2-202ENST00000359541 CPB1P15086 417 aa9.41□□□□□ -0.9
GTF3C2-202ENST00000359541 IGFBP6P24592 240 aaPredicted RBP9.41□□□□□ -0.9
GTF3C2-202ENST00000359541 CTBP1Q13363 440 aa9.41□□□□□ -0.9
GTF3C2-202ENST00000359541 ZNF235Q14590 738 aa9.41□□□□□ -0.9
GTF3C2-202ENST00000359541 CNGA3Q16281 694 aa9.41□□□□□ -0.9
GTF3C2-202ENST00000359541 CTXN3Q4LDR2 81 aa9.41□□□□□ -0.9
GTF3C2-202ENST00000359541 CST9Q5W186 159 aa9.41□□□□□ -0.9
GTF3C2-202ENST00000359541 ESRP1Q6NXG1 681 aaKnown RBP9.41□□□□□ -0.9
GTF3C2-202ENST00000359541 KDELC2Q7Z4H8 507 aa9.41□□□□□ -0.9
GTF3C2-202ENST00000359541 SLC22A9Q8IVM8 553 aa9.41□□□□□ -0.9
GTF3C2-202ENST00000359541 TRPV1Q8NER1 839 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms