RNA–Protein interactions for RNA: ENST00000358994.8

PTPA-206, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-206ENST00000358994 ABRAXAS1Q6UWZ7 409 aa18.33■□□□□ 0.53
PTPA-206ENST00000358994 COLGALT2Q8IYK4 626 aa18.33■□□□□ 0.53
PTPA-206ENST00000358994 OR2T34Q8NGX1 318 aa18.33■□□□□ 0.53
PTPA-206ENST00000358994 OR2T3Q8NH03 318 aa18.33■□□□□ 0.53
PTPA-206ENST00000358994 BCO2Q9BYV7 579 aa18.33■□□□□ 0.53
PTPA-206ENST00000358994 TMEM181Q9P2C4 612 aa18.33■□□□□ 0.53
PTPA-206ENST00000358994 MDM4O15151 490 aa18.33■□□□□ 0.52
PTPA-206ENST00000358994 S100A1P23297 94 aa18.33■□□□□ 0.52
PTPA-206ENST00000358994 LDLRAP1Q5SW96 308 aa18.33■□□□□ 0.52
PTPA-206ENST00000358994 IFNLR1Q8IU57 520 aaPredicted RBP18.33■□□□□ 0.52
PTPA-206ENST00000358994 SNX31Q8N9S9 440 aa18.33■□□□□ 0.52
PTPA-206ENST00000358994 NETO2Q8NC67 525 aa18.33■□□□□ 0.52
PTPA-206ENST00000358994 CCDC138Q96M89 665 aa18.33■□□□□ 0.52
PTPA-206ENST00000358994 TBCBQ99426 244 aa18.33■□□□□ 0.52
PTPA-206ENST00000358994 CGREF1Q99674 301 aa18.33■□□□□ 0.52
PTPA-206ENST00000358994 SLC39A3Q9BRY0 314 aa18.33■□□□□ 0.52
PTPA-206ENST00000358994 HGH1Q9BTY7 390 aa18.33■□□□□ 0.52
PTPA-206ENST00000358994 UNKQ9C0B0 810 aaKnown RBP18.33■□□□□ 0.52
PTPA-206ENST00000358994 CCM2LQ9NUG4 571 aaPredicted RBP18.33■□□□□ 0.52
PTPA-206ENST00000358994 AURKCQ9UQB9 309 aa18.33■□□□□ 0.52
PTPA-206ENST00000358994 RNF103-CHMP3A0A140T963 221 aa18.32■□□□□ 0.52
PTPA-206ENST00000358994 TCP10L2B9ZVM9 353 aa18.32■□□□□ 0.52
PTPA-206ENST00000358994 CABYRO75952 493 aa18.32■□□□□ 0.52
PTPA-206ENST00000358994 KRT19P08727 400 aa18.32■□□□□ 0.52
PTPA-206ENST00000358994 TMBIM6P55061 237 aa18.32■□□□□ 0.52
PTPA-206ENST00000358994 ACTR2P61160 394 aa18.32■□□□□ 0.52
PTPA-206ENST00000358994 STRIP1Q5VSL9 837 aa18.32■□□□□ 0.52
PTPA-206ENST00000358994 ABHD15Q6UXT9 468 aa18.32■□□□□ 0.52
PTPA-206ENST00000358994 SEPT8Q92599 483 aa18.32■□□□□ 0.52
PTPA-206ENST00000358994 HPS1Q92902 700 aa18.32■□□□□ 0.52
PTPA-206ENST00000358994 ZNF669Q96BR6 464 aaPredicted RBP18.32■□□□□ 0.52
PTPA-206ENST00000358994 CNDP2Q96KP4 475 aaKnown RBP18.32■□□□□ 0.52
PTPA-206ENST00000358994 C1QTNF1Q9BXJ1 281 aa18.32■□□□□ 0.52
PTPA-206ENST00000358994 UPF3AQ9H1J1 476 aaKnown RBP18.32■□□□□ 0.52
PTPA-206ENST00000358994 CCDC167Q9P0B6 97 aa18.32■□□□□ 0.52
PTPA-206ENST00000358994 MID2Q9UJV3 735 aa18.32■□□□□ 0.52
PTPA-206ENST00000358994 PSMB4P28070 264 aa18.32■□□□□ 0.52
PTPA-206ENST00000358994 EML3Q32P44 896 aa18.32■□□□□ 0.52
PTPA-206ENST00000358994 AGKQ53H12 422 aa18.32■□□□□ 0.52
PTPA-206ENST00000358994 SAMD4BQ5PRF9 694 aaKnown RBP18.32■□□□□ 0.52
PTPA-206ENST00000358994 TBCELQ5QJ74 424 aa18.32■□□□□ 0.52
PTPA-206ENST00000358994 TMEM176AQ96HP8 235 aa18.32■□□□□ 0.52
PTPA-206ENST00000358994 CSF3RQ99062 836 aa18.32■□□□□ 0.52
PTPA-206ENST00000358994 TUBA1CQ9BQE3 449 aa18.32■□□□□ 0.52
PTPA-206ENST00000358994 TMEM134Q9H6X4 195 aa18.32■□□□□ 0.52
PTPA-206ENST00000358994 JPH1Q9HDC5 661 aaPredicted RBP18.32■□□□□ 0.52
PTPA-206ENST00000358994 EIF2B3Q9NR50 452 aaKnown RBP18.32■□□□□ 0.52
PTPA-206ENST00000358994 SEPT3Q9UH03 358 aa18.32■□□□□ 0.52
PTPA-206ENST00000358994 POLRMTO00411 1230 aaKnown RBP18.31■□□□□ 0.52
PTPA-206ENST00000358994 TPST1O60507 370 aa18.31■□□□□ 0.52
PTPA-206ENST00000358994 RGS20O76081 388 aa18.31■□□□□ 0.52
PTPA-206ENST00000358994 CPNE6O95741 557 aa18.31■□□□□ 0.52
PTPA-206ENST00000358994 CYP3A5P20815 502 aa18.31■□□□□ 0.52
PTPA-206ENST00000358994 RCVRNP35243 200 aa18.31■□□□□ 0.52
PTPA-206ENST00000358994 NR2C2P49116 596 aa18.31■□□□□ 0.52
PTPA-206ENST00000358994 ZBTB17Q13105 803 aa18.31■□□□□ 0.52
PTPA-206ENST00000358994 CAPSQ13938 189 aa18.31■□□□□ 0.52
PTPA-206ENST00000358994 ZNF667Q5HYK9 610 aa18.31■□□□□ 0.52
PTPA-206ENST00000358994 TMCO5AQ8N6Q1 288 aa18.31■□□□□ 0.52
PTPA-206ENST00000358994 RDH11Q8TC12 318 aa18.31■□□□□ 0.52
PTPA-206ENST00000358994 ZNF641Q96N77 438 aaPredicted RBP18.31■□□□□ 0.52
PTPA-206ENST00000358994 FTHL17Q9BXU8 183 aa18.31■□□□□ 0.52
PTPA-206ENST00000358994 AGPAT4Q9NRZ5 378 aa18.31■□□□□ 0.52
PTPA-206ENST00000358994 VPS51Q9UID3 782 aa18.31■□□□□ 0.52
PTPA-206ENST00000358994 CPSF3Q9UKF6 684 aaKnown RBP18.31■□□□□ 0.52
PTPA-206ENST00000358994 SLC27A5Q9Y2P5 690 aa18.31■□□□□ 0.52
PTPA-206ENST00000358994 ST14Q9Y5Y6 855 aa18.31■□□□□ 0.52
PTPA-206ENST00000358994 OPRL1P41146 370 aa18.31■□□□□ 0.52
PTPA-206ENST00000358994 SLC7A2P52569 658 aa18.31■□□□□ 0.52
PTPA-206ENST00000358994 FASTKQ14296 549 aaKnown RBP18.31■□□□□ 0.52
PTPA-206ENST00000358994 ZNF618Q5T7W0 954 aa18.31■□□□□ 0.52
PTPA-206ENST00000358994 NCBP2-AS2Q69YL0 99 aa18.31■□□□□ 0.52
PTPA-206ENST00000358994 VSIG10LQ86VR7 867 aa18.31■□□□□ 0.52
PTPA-206ENST00000358994 ANKRD52Q8NB46 1076 aa18.31■□□□□ 0.52
PTPA-206ENST00000358994 SHCBP1Q8NEM2 672 aa18.31■□□□□ 0.52
PTPA-206ENST00000358994 GPRASP2Q96D09 838 aa18.31■□□□□ 0.52
PTPA-206ENST00000358994 PSD2Q9BQI7 771 aa18.31■□□□□ 0.52
PTPA-206ENST00000358994 SOX17Q9H6I2 414 aaPredicted RBP18.31■□□□□ 0.52
PTPA-206ENST00000358994 GGA3Q9NZ52 723 aa18.31■□□□□ 0.52
PTPA-206ENST00000358994 SCHIP1Q9P0W5 487 aaPredicted RBP18.31■□□□□ 0.52
PTPA-206ENST00000358994 OAZ3Q9UMX2 235 aa18.31■□□□□ 0.52
PTPA-206ENST00000358994 DPYSL4O14531 572 aa18.3■□□□□ 0.52
PTPA-206ENST00000358994 PFDN6O15212 129 aa18.3■□□□□ 0.52
PTPA-206ENST00000358994 ACOX3O15254 700 aa18.3■□□□□ 0.52
PTPA-206ENST00000358994 CILPO75339 1184 aa18.3■□□□□ 0.52
PTPA-206ENST00000358994 TOMM70O94826 608 aa18.3■□□□□ 0.52
PTPA-206ENST00000358994 APOA4P06727 396 aa18.3■□□□□ 0.52
PTPA-206ENST00000358994 GSSP48637 474 aa18.3■□□□□ 0.52
PTPA-206ENST00000358994 RGS7P49802 495 aa18.3■□□□□ 0.52
PTPA-206ENST00000358994 ATXN1P54253 815 aaKnown RBP18.3■□□□□ 0.52
PTPA-206ENST00000358994 ATP6AP1Q15904 470 aa18.3■□□□□ 0.52
PTPA-206ENST00000358994 CLPPQ16740 277 aaPredicted RBP18.3■□□□□ 0.52
PTPA-206ENST00000358994 PERM1Q5SV97 790 aa18.3■□□□□ 0.52
PTPA-206ENST00000358994 C8orf82Q6P1X6 216 aaPredicted RBP18.3■□□□□ 0.52
PTPA-206ENST00000358994 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.3■□□□□ 0.522e-6■■■■■ 146.1
PTPA-206ENST00000358994 SNX19Q92543 992 aa18.3■□□□□ 0.52
PTPA-206ENST00000358994 SCYL1Q96KG9 808 aa18.3■□□□□ 0.52
PTPA-206ENST00000358994 HEXIM2Q96MH2 286 aaKnown RBP18.3■□□□□ 0.52
PTPA-206ENST00000358994 GLT1D1Q96MS3 346 aa18.3■□□□□ 0.52
PTPA-206ENST00000358994 CD320Q9NPF0 282 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms