RNA–Protein interactions for RNA: ENST00000358552.7

NFIX-201, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-201ENST00000358552 GFRA2O00451 464 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 SNX3O60493 162 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 ATP5HO75947 161 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 CA3P07451 260 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 HLA-DPA1P20036 260 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 POLD2P49005 469 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 ITKQ08881 620 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 NSUN2Q08J23 767 aaKnown RBP eCLIP13.47□□□□□ -0.25
NFIX-201ENST00000358552 RIPK1Q13546 671 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 PKN3Q6P5Z2 889 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 RFWD3Q6PCD5 774 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 LMNTD2Q8IXW0 634 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 AGGF1Q8N302 714 aaeCLIP13.47□□□□□ -0.25
NFIX-201ENST00000358552 ATP2A3Q93084 1043 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 PPP2R3CQ969Q6 453 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 TADA1Q96BN2 335 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 OTUB2Q96DC9 234 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 CERS2Q96G23 380 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 CORO1BQ9BR76 489 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 PDFQ9HBH1 243 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 NT5MQ9NPB1 228 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 SYBUQ9NX95 663 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 PRKAG3Q9UGI9 489 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 ANAPC1Q9H1A4 1944 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.47□□□□□ -0.25
NFIX-201ENST00000358552 J3KR12 359 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 LUC7L3O95232 432 aaKnown RBP13.47□□□□□ -0.25
NFIX-201ENST00000358552 PAPLNO95428 1278 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 C1QAP02745 245 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 SPATA31D3P0C874 917 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 EZRP15311 586 aaKnown RBP13.47□□□□□ -0.25
NFIX-201ENST00000358552 WEE1P30291 646 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 SKIV2L2P42285 1042 aaKnown RBP13.47□□□□□ -0.25
NFIX-201ENST00000358552 MAPK8P45983 427 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 WNT3AP56704 352 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 SLC10A7Q0GE19 358 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 SPARCL1Q14515 664 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 ANKRD20A4Q4UJ75 823 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 RETSATQ6NUM9 610 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 CYB5D1Q6P9G0 228 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 SPATA31D4Q6ZUB0 917 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 CYP4X1Q8N118 509 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 MPP5Q8N3R9 675 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 MAB21L3Q8N8X9 362 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 CCDC63Q8NA47 563 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 IPMKQ8NFU5 416 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 CALML6Q8TD86 181 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 FEM1CQ96JP0 617 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 CDCA3Q99618 268 aaPredicted RBP13.47□□□□□ -0.25
NFIX-201ENST00000358552 ELAC2Q9BQ52 826 aaKnown RBP13.47□□□□□ -0.25
NFIX-201ENST00000358552 MGME1Q9BQP7 344 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 C17orf80Q9BSJ5 609 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 C2orf49Q9BVC5 232 aaPredicted RBP13.47□□□□□ -0.25
NFIX-201ENST00000358552 CINPQ9BW66 212 aaPredicted RBP13.47□□□□□ -0.25
NFIX-201ENST00000358552 ATP13A1Q9HD20 1204 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 MAN1C1Q9NR34 630 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 MKS1Q9NXB0 559 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 KIAA1522Q9P206 1035 aaPredicted RBP13.47□□□□□ -0.25
NFIX-201ENST00000358552 CTNNAL1Q9UBT7 734 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 RIMKLBQ9ULI2 386 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 SLC12A4Q9UP95 1085 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 SHROOM3Q8TF72 1996 aa13.47□□□□□ -0.25
NFIX-201ENST00000358552 LOC285095A0A1B0GVY8 99 aa13.46□□□□□ -0.25
NFIX-201ENST00000358552 HIDE1A8MVS5 230 aa13.46□□□□□ -0.25
NFIX-201ENST00000358552 SLC9A3R1O14745 358 aaPredicted RBP13.46□□□□□ -0.25
NFIX-201ENST00000358552 GREM1O60565 184 aa13.46□□□□□ -0.25
NFIX-201ENST00000358552 ARHGEF15O94989 841 aa13.46□□□□□ -0.25
NFIX-201ENST00000358552 FGF1P05230 155 aa13.46□□□□□ -0.25
NFIX-201ENST00000358552 IRF1P10914 325 aa13.46□□□□□ -0.25
NFIX-201ENST00000358552 MYL4P12829 197 aa13.46□□□□□ -0.25
NFIX-201ENST00000358552 ALADP13716 330 aa13.46□□□□□ -0.25
NFIX-201ENST00000358552 KRT4P19013 534 aa13.46□□□□□ -0.25
NFIX-201ENST00000358552 SPRP35270 261 aaPredicted RBP13.46□□□□□ -0.25
NFIX-201ENST00000358552 GP5P40197 560 aa13.46□□□□□ -0.25
NFIX-201ENST00000358552 SERPINH1P50454 418 aaKnown RBP13.46□□□□□ -0.25
NFIX-201ENST00000358552 CSE1LP55060 971 aaKnown RBP13.46□□□□□ -0.25
NFIX-201ENST00000358552 RPS24P62847 133 aaKnown RBP13.46□□□□□ -0.25
NFIX-201ENST00000358552 SLC18A2Q05940 514 aa13.46□□□□□ -0.25
NFIX-201ENST00000358552 NIPAL4Q0D2K0 466 aa13.46□□□□□ -0.25
NFIX-201ENST00000358552 CCDC15Q0P6D6 951 aa13.46□□□□□ -0.25
NFIX-201ENST00000358552 GPM6BQ13491 265 aa13.46□□□□□ -0.25
NFIX-201ENST00000358552 CDH18Q13634 790 aa13.46□□□□□ -0.25
NFIX-201ENST00000358552 FYB2Q5VWT5 728 aa13.46□□□□□ -0.25
NFIX-201ENST00000358552 KDELC1Q6UW63 502 aa13.46□□□□□ -0.25
NFIX-201ENST00000358552 CMTM8Q8IZV2 173 aa13.46□□□□□ -0.25
NFIX-201ENST00000358552 CFAP52Q8N1V2 620 aa13.46□□□□□ -0.25
NFIX-201ENST00000358552 SCG3Q8WXD2 468 aaKnown RBP13.46□□□□□ -0.25
NFIX-201ENST00000358552 IFT43Q96FT9 208 aa13.46□□□□□ -0.25
NFIX-201ENST00000358552 MRGPRX2Q96LB1 330 aa13.46□□□□□ -0.25
NFIX-201ENST00000358552 PRICKLE1Q96MT3 831 aaPredicted RBP13.46□□□□□ -0.25
NFIX-201ENST00000358552 SRPK1Q96SB4 655 aaKnown RBP13.46□□□□□ -0.25
NFIX-201ENST00000358552 SPON2Q9BUD6 331 aa13.46□□□□□ -0.25
NFIX-201ENST00000358552 MUC3BQ9H195 1237 aa13.46□□□□□ -0.25
NFIX-201ENST00000358552 KLHL14Q9P2G3 628 aa13.46□□□□□ -0.25
NFIX-201ENST00000358552 CHD5Q8TDI0 1954 aa13.46□□□□□ -0.26
NFIX-201ENST00000358552 CHD9Q3L8U1 2897 aa13.46□□□□□ -0.26
NFIX-201ENST00000358552 ATG2AQ2TAZ0 1938 aa13.45□□□□□ -0.26
NFIX-201ENST00000358552 A0A1W2PRU2 124 aa13.45□□□□□ -0.26
NFIX-201ENST00000358552 TIMM44O43615 452 aa13.45□□□□□ -0.26
NFIX-201ENST00000358552 ATP9BO43861 1147 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms