RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 CLUHO75153 1309 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 SLC28A1O00337 649 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 MTA2O94776 668 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 LRIG2O94898 1065 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 CTDNEP1O95476 244 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 GNRH1P01148 92 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 LTA4HP09960 611 aaKnown RBP12.97□□□□□ -0.33
SMC4-202ENST00000357388 RARAP10276 462 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 ATP5F1P24539 256 aaPredicted RBP12.97□□□□□ -0.33
SMC4-202ENST00000357388 CDH4P55283 916 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 SCN1BQ07699 218 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 LIN52Q52LA3 116 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 MARC1Q5VT66 337 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 BHLHB9Q6PI77 547 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 IL27RAQ6UWB1 636 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 ARHGAP36Q6ZRI8 547 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 PAGE2Q7Z2X7 111 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 TRMT11Q7Z4G4 463 aaKnown RBP12.97□□□□□ -0.33
SMC4-202ENST00000357388 NAT14Q8WUY8 206 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 NELL1Q92832 810 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 SLC5A5Q92911 643 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 MTMR8Q96EF0 704 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 SEMA6BQ9H3T3 888 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 RAP2CQ9Y3L5 183 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 PCDHGA3Q9Y5H0 932 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 APOC4-APOC2K7ER74 178 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 SGTAO43765 313 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 CST1P01037 141 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 APOC2P02655 101 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 UMPSP11172 480 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 SSTR1P30872 391 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 MAPK9P45984 424 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 POLD2P49005 469 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 GALK1P51570 392 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 DRG2P55039 364 aaKnown RBP12.97□□□□□ -0.33
SMC4-202ENST00000357388 CBWD3Q5JTY5 395 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 CBWD5Q5RIA9 395 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 POTEHQ6S545 545 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 FRMD7Q6ZUT3 714 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 PQLC1Q8N2U9 271 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 NKAPQ8N5F7 415 aaKnown RBP12.97□□□□□ -0.33
SMC4-202ENST00000357388 MED28Q9H204 178 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 TMEM165Q9HC07 324 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 NT5MQ9NPB1 228 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 TMEM39AQ9NV64 488 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 PTTG2Q9NZH5 202 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 PEX16Q9Y5Y5 336 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 PSMD11O00231 422 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 RTN3O95197 1032 aaPredicted RBP12.97□□□□□ -0.33
SMC4-202ENST00000357388 MT-CO1P00395 513 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 FOSL2P15408 326 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 CCR1P32246 355 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 CREG2Q8IUH2 290 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 TSEN2Q8NCE0 465 aaKnown RBP12.97□□□□□ -0.33
SMC4-202ENST00000357388 PNPT1Q8TCS8 783 aaKnown RBP12.97□□□□□ -0.33
SMC4-202ENST00000357388 DNAJC1Q96KC8 554 aaKnown RBP12.97□□□□□ -0.33
SMC4-202ENST00000357388 SLC4A5Q9BY07 1137 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 SLC35C2Q9NQQ7 365 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 DHRS7Q9Y394 339 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 PCDHA11Q9Y5I1 949 aa12.97□□□□□ -0.33
SMC4-202ENST00000357388 ENTPD5O75356 428 aa12.96□□□□□ -0.33
SMC4-202ENST00000357388 IGSF6O95976 241 aa12.96□□□□□ -0.33
SMC4-202ENST00000357388 TGFB2P61812 414 aa12.96□□□□□ -0.33
SMC4-202ENST00000357388 ARF5P84085 180 aa12.96□□□□□ -0.33
SMC4-202ENST00000357388 BIKQ13323 160 aa12.96□□□□□ -0.33
SMC4-202ENST00000357388 AUHQ13825 339 aaKnown RBP12.96□□□□□ -0.33
SMC4-202ENST00000357388 LACTB2Q53H82 288 aaPredicted RBP12.96□□□□□ -0.33
SMC4-202ENST00000357388 NDOR1Q9UHB4 597 aa12.96□□□□□ -0.33
SMC4-202ENST00000357388 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.96□□□□□ -0.332e-144■■■■■ 553.7
SMC4-202ENST00000357388 REM1O75628 298 aa12.96□□□□□ -0.33
SMC4-202ENST00000357388 CYP7B1O75881 506 aa12.96□□□□□ -0.33
SMC4-202ENST00000357388 CDC25CP30307 473 aa12.96□□□□□ -0.33
SMC4-202ENST00000357388 PPP4CP60510 307 aa12.96□□□□□ -0.33
SMC4-202ENST00000357388 ZNF470Q6ECI4 717 aa12.96□□□□□ -0.33
SMC4-202ENST00000357388 GPSM1Q86YR5 675 aa12.96□□□□□ -0.33
SMC4-202ENST00000357388 STAG3L4Q8TBR4 150 aa12.96□□□□□ -0.33
SMC4-202ENST00000357388 KBTBD7Q8WVZ9 684 aa12.96□□□□□ -0.33
SMC4-202ENST00000357388 SOCS4Q8WXH5 440 aa12.96□□□□□ -0.33
SMC4-202ENST00000357388 SERAC1Q96JX3 654 aa12.96□□□□□ -0.33
SMC4-202ENST00000357388 CCDC115Q96NT0 180 aa12.96□□□□□ -0.33
SMC4-202ENST00000357388 HOPXQ9BPY8 73 aaPredicted RBP12.96□□□□□ -0.33
SMC4-202ENST00000357388 RBM22Q9NW64 420 aaKnown RBP eCLIP12.96□□□□□ -0.335e-24■■■■■ 66.5
SMC4-202ENST00000357388 GPATCH2LQ9NWQ4 482 aa12.96□□□□□ -0.33
SMC4-202ENST00000357388 PCYOX1Q9UHG3 505 aa12.96□□□□□ -0.33
SMC4-202ENST00000357388 ITGA11Q9UKX5 1188 aa12.96□□□□□ -0.33
SMC4-202ENST00000357388 HECW2Q9P2P5 1572 aa12.96□□□□□ -0.33
SMC4-202ENST00000357388 A0A0G2JPF8 293 aa12.96□□□□□ -0.33
SMC4-202ENST00000357388 HNRNPCL3B7ZW38 293 aa12.96□□□□□ -0.33
SMC4-202ENST00000357388 HNRNPCL4P0DMR1 293 aa12.96□□□□□ -0.33
SMC4-202ENST00000357388 DGKAP23743 735 aa12.96□□□□□ -0.33
SMC4-202ENST00000357388 CLCN3P51790 818 aa12.96□□□□□ -0.33
SMC4-202ENST00000357388 KCNA10Q16322 511 aa12.96□□□□□ -0.33
SMC4-202ENST00000357388 MEA1Q16626 185 aa12.96□□□□□ -0.33
SMC4-202ENST00000357388 AMHR2Q16671 573 aa12.96□□□□□ -0.33
SMC4-202ENST00000357388 CLCC1Q96S66 551 aa12.96□□□□□ -0.33
SMC4-202ENST00000357388 RUSC1Q9BVN2 902 aa12.96□□□□□ -0.33
SMC4-202ENST00000357388 FAM126AQ9BYI3 521 aaPredicted RBP12.96□□□□□ -0.33
SMC4-202ENST00000357388 EHD1Q9H4M9 534 aa12.96□□□□□ -0.33
SMC4-202ENST00000357388 KIF1BO60333 1816 aa12.96□□□□□ -0.33
SMC4-202ENST00000357388 BTNL10A8MVZ5 291 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms