RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 VNN2O95498 520 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 GGPS1O95749 300 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 COL9A1P20849 921 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 NMBRP28336 390 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 ATN1P54259 1190 aaPredicted RBP5.74□□□□□ -1.49
CD47-201ENST00000355354 COPS2P61201 443 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 BASP1P80723 227 aaKnown RBP5.74□□□□□ -1.49
CD47-201ENST00000355354 DLX2Q07687 328 aaPredicted RBP5.74□□□□□ -1.49
CD47-201ENST00000355354 SELPLGQ14242 412 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 SMN1Q16637 294 aaKnown RBP5.74□□□□□ -1.49
CD47-201ENST00000355354 EFHC2Q5JST6 749 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 ESRP1Q6NXG1 681 aaKnown RBP5.74□□□□□ -1.49
CD47-201ENST00000355354 CNSTQ6PJW8 725 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 CXCL17Q6UXB2 119 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 SMRP1Q8NCR6 262 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 OR52K1Q8NGK4 314 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 AFG1LQ8WV93 481 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 NAF1Q96HR8 494 aaKnown RBP5.74□□□□□ -1.49
CD47-201ENST00000355354 EGLN2Q96KS0 407 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 C11orf84Q9BUA3 381 aaPredicted RBP5.74□□□□□ -1.49
CD47-201ENST00000355354 PITPNM3Q9BZ71 974 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 NT5C3AQ9H0P0 336 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 RNPEPL1Q9HAU8 725 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 SAR1AQ9NR31 198 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 MAP10Q9P2G4 905 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 AP4E1Q9UPM8 1137 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 BOLA1Q9Y3E2 137 aa5.74□□□□□ -1.49
CD47-201ENST00000355354 ADAM23O75077 832 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 GPR32O75388 356 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 SAT1P21673 171 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 KDELR1P24390 212 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 IL12AP29459 219 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 GNA15P30679 374 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 ARL2P36404 184 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 RBMXP38159 391 aaKnown RBP5.73□□□□□ -1.49
CD47-201ENST00000355354 AQP5P55064 265 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 PHC1P78364 1004 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 TNFAIP2Q03169 654 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 SEMA5AQ13591 1074 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 TAZQ16635 292 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 GTDC1Q4AE62 458 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 HSP90B2PQ58FF3 399 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 CNKSR3Q6P9H4 555 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 PGM2L1Q6PCE3 622 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.73□□□□□ -1.495e-7■■■■□ 21.8
CD47-201ENST00000355354 SPATA21Q7Z572 469 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 HMGN2P46Q86SG4 172 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 SLC9A9Q8IVB4 645 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 RIBC1Q8N443 379 aaPredicted RBP5.73□□□□□ -1.49
CD47-201ENST00000355354 NECAB3Q96P71 396 aaPredicted RBP5.73□□□□□ -1.49
CD47-201ENST00000355354 PKP2Q99959 881 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 CCDC86Q9H6F5 360 aaKnown RBP5.73□□□□□ -1.49
CD47-201ENST00000355354 CYP4F12Q9HCS2 524 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 CRTAC1Q9NQ79 661 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 ARGLU1Q9NWB6 273 aaPredicted RBP5.73□□□□□ -1.49
CD47-201ENST00000355354 SRRM2Q9UQ35 2752 aaKnown RBP5.73□□□□□ -1.49
CD47-201ENST00000355354 NAGLUP54802 743 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 CUL2Q13617 745 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 MYLK3Q32MK0 819 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 CDK15Q96Q40 435 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 SLC4A7Q9Y6M7 1214 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 PMF1-BGLAPU3KQ54 211 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 WDR27A2RRH5 827 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 ASB14A6NK59 587 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 C2CD4BA6NLJ0 364 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 A8MX80 341 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 TMEM229AB2RXF0 380 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 ZBTB24O43167 697 aaPredicted RBP5.73□□□□□ -1.49
CD47-201ENST00000355354 FAM13AO94988 1023 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 WISP1O95388 367 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 MUTP22033 750 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 CD6P30203 668 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 RAB27AP51159 221 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 MRPS22P82650 360 aaKnown RBP5.73□□□□□ -1.49
CD47-201ENST00000355354 PLCB3Q01970 1234 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 HYAL1Q12794 435 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 SRSF5Q13243 272 aaKnown RBP5.73□□□□□ -1.49
CD47-201ENST00000355354 CNGA3Q16281 694 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 HSP90AA5PQ58FG0 334 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 GPATCH4Q5T3I0 446 aaKnown RBP5.73□□□□□ -1.49
CD47-201ENST00000355354 BRAT1Q6PJG6 821 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 CCDC65Q8IXS2 484 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 PIANPQ8IYJ0 282 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 SLC52A3Q9NQ40 469 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 SNTG2Q9NY99 539 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 AGO2Q9UKV8 859 aaKnown RBP5.73□□□□□ -1.49
CD47-201ENST00000355354 PEX11BO96011 259 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 AHSGP02765 367 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 ZNF26P17031 533 aaPredicted RBP5.73□□□□□ -1.49
CD47-201ENST00000355354 MAGEA3P43357 314 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 AGTR2P50052 363 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 YARSP54577 528 aaKnown RBP5.73□□□□□ -1.49
CD47-201ENST00000355354 TBL3Q12788 808 aaKnown RBP5.73□□□□□ -1.49
CD47-201ENST00000355354 BIRC3Q13489 604 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 KCNJ11Q14654 390 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 GEN1Q17RS7 908 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 OGFOD2Q6N063 350 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 CACNA2D3Q8IZS8 1091 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 ALLCQ8N6M5 410 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 TXNDC5Q8NBS9 432 aaKnown RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms