RNA–Protein interactions for RNA: ENST00000353546.7

ARFGAP1-201, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ARFGAP1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-201ENST00000353546 ZNF214Q9UL59 606 aaPredicted RBP17.09■□□□□ 0.33
ARFGAP1-201ENST00000353546 GOLGA8QA0A0J9YX86 632 aa17.08■□□□□ 0.33
ARFGAP1-201ENST00000353546 GOLGA8OA6NCC3 632 aa17.08■□□□□ 0.33
ARFGAP1-201ENST00000353546 GOLGA8NF8WBI6 632 aa17.08■□□□□ 0.33
ARFGAP1-201ENST00000353546 DLGAP1O14490 977 aa17.08■□□□□ 0.33
ARFGAP1-201ENST00000353546 CDK2AP1O14519 115 aa17.08■□□□□ 0.33
ARFGAP1-201ENST00000353546 HOXC6P09630 235 aa17.08■□□□□ 0.33
ARFGAP1-201ENST00000353546 VDRP11473 427 aa17.08■□□□□ 0.33
ARFGAP1-201ENST00000353546 POLR2IP36954 125 aaKnown RBP17.08■□□□□ 0.33
ARFGAP1-201ENST00000353546 MAPRE1Q15691 268 aaKnown RBP17.08■□□□□ 0.33
ARFGAP1-201ENST00000353546 CEP78Q5JTW2 689 aa17.08■□□□□ 0.33
ARFGAP1-201ENST00000353546 FAM102AQ5T9C2 384 aaPredicted RBP17.08■□□□□ 0.33
ARFGAP1-201ENST00000353546 TMC5Q6UXY8 1006 aa17.08■□□□□ 0.33
ARFGAP1-201ENST00000353546 CAND1Q86VP6 1230 aaKnown RBP17.08■□□□□ 0.33
ARFGAP1-201ENST00000353546 ZC3H15Q8WU90 426 aaKnown RBP17.08■□□□□ 0.33
ARFGAP1-201ENST00000353546 ADPGKQ9BRR6 497 aa17.08■□□□□ 0.33
ARFGAP1-201ENST00000353546 ZBED2Q9BTP6 218 aa17.08■□□□□ 0.33
ARFGAP1-201ENST00000353546 RNPEPQ9H4A4 650 aa17.08■□□□□ 0.33
ARFGAP1-201ENST00000353546 TMEM9Q9P0T7 183 aa17.08■□□□□ 0.33
ARFGAP1-201ENST00000353546 VPS28Q9UK41 221 aa17.08■□□□□ 0.33
ARFGAP1-201ENST00000353546 CPSF3Q9UKF6 684 aaKnown RBP17.08■□□□□ 0.33
ARFGAP1-201ENST00000353546 DNAH12Q6ZR08 3092 aa17.08■□□□□ 0.32
ARFGAP1-201ENST00000353546 OSBPP22059 807 aa17.08■□□□□ 0.32
ARFGAP1-201ENST00000353546 GRSF1Q12849 480 aaKnown RBP eCLIP17.08■□□□□ 0.32
ARFGAP1-201ENST00000353546 ZNF846Q147U1 533 aa17.08■□□□□ 0.32
ARFGAP1-201ENST00000353546 CDO1Q16878 200 aa17.08■□□□□ 0.32
ARFGAP1-201ENST00000353546 BPIFB6Q8NFQ5 453 aa17.08■□□□□ 0.32
ARFGAP1-201ENST00000353546 FAM110BQ8TC76 370 aa17.08■□□□□ 0.32
ARFGAP1-201ENST00000353546 AGR3Q8TD06 166 aa17.08■□□□□ 0.32
ARFGAP1-201ENST00000353546 ZUFSPQ96AP4 578 aa17.08■□□□□ 0.32
ARFGAP1-201ENST00000353546 PPP1R36Q96LQ0 422 aa17.08■□□□□ 0.32
ARFGAP1-201ENST00000353546 AASDHPPTQ9NRN7 309 aa17.08■□□□□ 0.32
ARFGAP1-201ENST00000353546 ASNSD1Q9NWL6 643 aa17.08■□□□□ 0.32
ARFGAP1-201ENST00000353546 PAK5Q9P286 719 aa17.08■□□□□ 0.32
ARFGAP1-201ENST00000353546 IPO11Q9UI26 975 aaKnown RBP17.08■□□□□ 0.32
ARFGAP1-201ENST00000353546 CENPBD1B2RD01 187 aa17.07■□□□□ 0.32
ARFGAP1-201ENST00000353546 TNNC2P02585 160 aa17.07■□□□□ 0.32
ARFGAP1-201ENST00000353546 PHC1P78364 1004 aa17.07■□□□□ 0.32
ARFGAP1-201ENST00000353546 BFSP2Q13515 415 aa17.07■□□□□ 0.32
ARFGAP1-201ENST00000353546 STILQ15468 1287 aa17.07■□□□□ 0.32
ARFGAP1-201ENST00000353546 C15orf59Q2T9L4 293 aaPredicted RBP17.07■□□□□ 0.32
ARFGAP1-201ENST00000353546 PRR23BQ6ZRT6 265 aa17.07■□□□□ 0.32
ARFGAP1-201ENST00000353546 AKAP14Q86UN6 197 aa17.07■□□□□ 0.32
ARFGAP1-201ENST00000353546 LRRC49Q8IUZ0 686 aa17.07■□□□□ 0.32
ARFGAP1-201ENST00000353546 HERC6Q8IVU3 1022 aa17.07■□□□□ 0.32
ARFGAP1-201ENST00000353546 C10orf107Q8IVU9 208 aa17.07■□□□□ 0.32
ARFGAP1-201ENST00000353546 TNIP2Q8NFZ5 429 aa17.07■□□□□ 0.32
ARFGAP1-201ENST00000353546 ZBED3Q96IU2 234 aaPredicted RBP17.07■□□□□ 0.32
ARFGAP1-201ENST00000353546 TWNKQ96RR1 684 aa17.07■□□□□ 0.32
ARFGAP1-201ENST00000353546 HMGXB4Q9UGU5 601 aa17.07■□□□□ 0.32
ARFGAP1-201ENST00000353546 SFMBT1Q9UHJ3 866 aa17.07■□□□□ 0.32
ARFGAP1-201ENST00000353546 HACL1Q9UJ83 578 aa17.07■□□□□ 0.32
ARFGAP1-201ENST00000353546 TCAF1Q9Y4C2 921 aa17.07■□□□□ 0.32
ARFGAP1-201ENST00000353546 FER1L6Q2WGJ9 1857 aa17.07■□□□□ 0.32
ARFGAP1-201ENST00000353546 NUAK1O60285 661 aa17.07■□□□□ 0.32
ARFGAP1-201ENST00000353546 MX2P20592 715 aa17.07■□□□□ 0.32
ARFGAP1-201ENST00000353546 PRKCHP24723 683 aa17.07■□□□□ 0.32
ARFGAP1-201ENST00000353546 RBL1P28749 1068 aa17.07■□□□□ 0.32
ARFGAP1-201ENST00000353546 IFNA8P32881 189 aa17.07■□□□□ 0.32
ARFGAP1-201ENST00000353546 CHRNEQ04844 493 aa17.07■□□□□ 0.32
ARFGAP1-201ENST00000353546 TFDP2Q14188 446 aa17.07■□□□□ 0.32
ARFGAP1-201ENST00000353546 PCLAFQ15004 111 aa17.07■□□□□ 0.32
ARFGAP1-201ENST00000353546 MAPK11Q15759 364 aa17.07■□□□□ 0.32
ARFGAP1-201ENST00000353546 N4BP2L1Q5TBK1 243 aaPredicted RBP17.07■□□□□ 0.32
ARFGAP1-201ENST00000353546 PGAM4Q8N0Y7 254 aa17.07■□□□□ 0.32
ARFGAP1-201ENST00000353546 PGBD4Q96DM1 585 aa17.07■□□□□ 0.32
ARFGAP1-201ENST00000353546 TMA16Q96EY4 203 aaKnown RBP17.07■□□□□ 0.32
ARFGAP1-201ENST00000353546 MARK4Q96L34 752 aa17.07■□□□□ 0.32
ARFGAP1-201ENST00000353546 SDCBP2Q9H190 292 aa17.07■□□□□ 0.32
ARFGAP1-201ENST00000353546 ATP13A3Q9H7F0 1226 aa17.07■□□□□ 0.32
ARFGAP1-201ENST00000353546 SIP14410 1827 aa17.07■□□□□ 0.32
ARFGAP1-201ENST00000353546 RGSL1A5PLK6 1076 aa17.06■□□□□ 0.32
ARFGAP1-201ENST00000353546 SERPINE1P05121 402 aa17.06■□□□□ 0.32
ARFGAP1-201ENST00000353546 MYF6P23409 242 aa17.06■□□□□ 0.32
ARFGAP1-201ENST00000353546 UGT3A1Q6NUS8 523 aa17.06■□□□□ 0.32
ARFGAP1-201ENST00000353546 TRMT10BQ6PF06 316 aaKnown RBP17.06■□□□□ 0.32
ARFGAP1-201ENST00000353546 PLEKHG7Q6ZR37 379 aa17.06■□□□□ 0.32
ARFGAP1-201ENST00000353546 OFCC1Q8IZS5 231 aa17.06■□□□□ 0.32
ARFGAP1-201ENST00000353546 SLC4A11Q8NBS3 891 aa17.06■□□□□ 0.32
ARFGAP1-201ENST00000353546 TRAPPC12Q8WVT3 735 aa17.06■□□□□ 0.32
ARFGAP1-201ENST00000353546 TRIB2Q92519 343 aa17.06■□□□□ 0.32
ARFGAP1-201ENST00000353546 PCYT2Q99447 389 aa17.06■□□□□ 0.32
ARFGAP1-201ENST00000353546 RMND5AQ9H871 391 aa17.06■□□□□ 0.32
ARFGAP1-201ENST00000353546 VRTNQ9H8Y1 702 aa17.06■□□□□ 0.32
ARFGAP1-201ENST00000353546 NEK6Q9HC98 313 aa17.06■□□□□ 0.32
ARFGAP1-201ENST00000353546 PSME2Q9UL46 239 aa17.06■□□□□ 0.32
ARFGAP1-201ENST00000353546 COL11A1P12107 1806 aaPredicted RBP17.06■□□□□ 0.32
ARFGAP1-201ENST00000353546 SAC3D1A6NKF1 404 aa17.06■□□□□ 0.32
ARFGAP1-201ENST00000353546 M0QYV0 167 aa17.06■□□□□ 0.32
ARFGAP1-201ENST00000353546 CCRL2O00421 344 aa17.06■□□□□ 0.32
ARFGAP1-201ENST00000353546 TOR1BO14657 336 aa17.06■□□□□ 0.32
ARFGAP1-201ENST00000353546 TRDMT1O14717 391 aaKnown RBP17.06■□□□□ 0.32
ARFGAP1-201ENST00000353546 GRAP2O75791 330 aa17.06■□□□□ 0.32
ARFGAP1-201ENST00000353546 MICAL2O94851 1124 aa17.06■□□□□ 0.32
ARFGAP1-201ENST00000353546 ENDOD1O94919 500 aa17.06■□□□□ 0.32
ARFGAP1-201ENST00000353546 EEF1DP29692 281 aaKnown RBP17.06■□□□□ 0.32
ARFGAP1-201ENST00000353546 GMPRP36959 345 aa17.06■□□□□ 0.32
ARFGAP1-201ENST00000353546 GABRB2P47870 512 aa17.06■□□□□ 0.32
ARFGAP1-201ENST00000353546 EFNA5P52803 228 aa17.06■□□□□ 0.32
ARFGAP1-201ENST00000353546 PRKAA2P54646 552 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms