RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 ZDHHC18Q9NUE0 388 aa5.09□□□□□ -1.6
SKP1-202ENST00000353411 INTS10Q9NVR2 710 aaKnown RBP5.09□□□□□ -1.6
SKP1-202ENST00000353411 NPAP1Q9NZP6 1156 aa5.09□□□□□ -1.6
SKP1-202ENST00000353411 NDUFAF4Q9P032 175 aa5.09□□□□□ -1.6
SKP1-202ENST00000353411 TESMINQ9Y4I5 508 aa5.09□□□□□ -1.6
SKP1-202ENST00000353411 WRBO00258 174 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 PRMT3O60678 531 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 SERPINB7O75635 380 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 RPLP0P05388 317 aaKnown RBP5.08□□□□□ -1.6
SKP1-202ENST00000353411 MCAMP43121 646 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 ABCG1P45844 678 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 ZCCHC23Q6ZST2 131 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 ANGPTL6Q8NI99 470 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 ERLEC1Q96DZ1 483 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 SETDB2Q96T68 719 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 TTYH3Q9C0H2 523 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 MTMR12Q9C0I1 747 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 UNC93B1Q9H1C4 597 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 TP63Q9H3D4 680 aaPredicted RBP5.08□□□□□ -1.6
SKP1-202ENST00000353411 OLA1Q9NTK5 396 aaKnown RBP5.08□□□□□ -1.6
SKP1-202ENST00000353411 SLC39A1Q9NY26 324 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 DUSP12Q9UNI6 340 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.08□□□□□ -1.6
SKP1-202ENST00000353411 LOC102724428A0A0B4J2F2 783 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 POLR2CP19387 275 aaPredicted RBP5.08□□□□□ -1.6
SKP1-202ENST00000353411 ALDH1B1P30837 517 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 SFNP31947 248 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 SIK1P57059 783 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 DEFA5Q01523 94 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 ZIK1Q3SY52 487 aaPredicted RBP5.08□□□□□ -1.6
SKP1-202ENST00000353411 MTERF2Q49AM1 385 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 PABPC1LQ4VXU2 614 aaKnown RBP5.08□□□□□ -1.6
SKP1-202ENST00000353411 RRM2BQ7LG56 351 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 KIAA0895Q8NCT3 520 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 ROGDIQ9GZN7 287 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 ADAMTS10Q9H324 1103 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 LIN28AQ9H9Z2 209 aaKnown RBP5.08□□□□□ -1.6
SKP1-202ENST00000353411 AASSQ9UDR5 926 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 POLG2Q9UHN1 485 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 CBY1Q9Y3M2 126 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 H0Y858 1186 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 DNAJA2O60884 412 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 TULP3O75386 442 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 CYP11B1P15538 503 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 CD83Q01151 205 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 MOGSQ13724 837 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 TLR1Q15399 786 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 INSCQ1MX18 579 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 TMEM17Q86X19 198 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 SLC43A3Q8NBI5 491 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 SLC16A10Q8TF71 515 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 TEKT5Q96M29 485 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 GSDMCQ9BYG8 508 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 ADAM28Q9UKQ2 775 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 SNRNP200O75643 2136 aaKnown RBP5.08□□□□□ -1.6
SKP1-202ENST00000353411 SOAT2O75908 522 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 OR2B3O76000 313 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 PEPDP12955 493 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 FUT4P22083 530 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 AKT1P31749 480 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 FSTL1Q12841 308 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 PAOXQ6QHF9 649 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 HIPK1Q86Z02 1210 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 CACTIN-AS1Q8N1I8 211 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 LRRC57Q8N9N7 239 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 TOR3AQ9H497 397 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 LRRC40Q9H9A6 602 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 GPN1Q9HCN4 374 aaPredicted RBP5.08□□□□□ -1.6
SKP1-202ENST00000353411 CD93Q9NPY3 652 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 NECTIN3Q9NQS3 549 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 COMMD9Q9P000 198 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 IFT80Q9P2H3 777 aaPredicted RBP5.08□□□□□ -1.6
SKP1-202ENST00000353411 KCNN3Q9UGI6 736 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 ZNHIT2Q9UHR6 403 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 ACSL5Q9ULC5 683 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 NIP7Q9Y221 180 aaKnown RBP eCLIP5.08□□□□□ -1.6
SKP1-202ENST00000353411 EIF3LQ9Y262 564 aaKnown RBP5.08□□□□□ -1.6
SKP1-202ENST00000353411 ACOT9Q9Y305 439 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 ABCB7O75027 752 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 BMP3P12645 472 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 MAGP20916 626 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 PSMA1P25786 263 aaKnown RBP5.08□□□□□ -1.6
SKP1-202ENST00000353411 S100A2P29034 98 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 MAZP56270 477 aaKnown RBP5.08□□□□□ -1.6
SKP1-202ENST00000353411 S100A12P80511 92 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 VPS72Q15906 364 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 CYP2A13Q16696 494 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 SPOCD1Q6ZMY3 1216 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 PCDH20Q8N6Y1 951 aaKnown RBP5.08□□□□□ -1.6
SKP1-202ENST00000353411 SLC4A9Q96Q91 983 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 EIF2AK1Q9BQI3 630 aaKnown RBP5.08□□□□□ -1.6
SKP1-202ENST00000353411 SAV1Q9H4B6 383 aaPredicted RBP5.08□□□□□ -1.6
SKP1-202ENST00000353411 DPP3Q9NY33 737 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 TAS2R9Q9NYW1 312 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 MAGEL2Q9UJ55 1249 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 PCDHGA11Q9Y5H2 935 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 DIDO1Q9BTC0 2240 aaKnown RBP5.08□□□□□ -1.6
SKP1-202ENST00000353411 TTC3P53804 2025 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 CASZ1Q86V15 1759 aa5.08□□□□□ -1.6
SKP1-202ENST00000353411 OR14I1A6ND48 311 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms