RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 FZD3Q9NPG1 666 aa12.65□□□□□ -0.38
SGCA-202ENST00000344627 ACTL7AQ9Y615 435 aa12.65□□□□□ -0.38
SGCA-202ENST00000344627 HS3ST3A1Q9Y663 406 aa12.65□□□□□ -0.38
SGCA-202ENST00000344627 AK5Q9Y6K8 562 aa12.65□□□□□ -0.38
SGCA-202ENST00000344627 FAM149AA5PLN7 773 aa12.64□□□□□ -0.39
SGCA-202ENST00000344627 LRRC10BA6NIK2 292 aa12.64□□□□□ -0.39
SGCA-202ENST00000344627 SIGLEC16A6NMB1 481 aa12.64□□□□□ -0.39
SGCA-202ENST00000344627 FAM72CH0Y354 149 aa12.64□□□□□ -0.39
SGCA-202ENST00000344627 TEX33O43247 280 aa12.64□□□□□ -0.39
SGCA-202ENST00000344627 CREB3O43889 395 aa12.64□□□□□ -0.39
SGCA-202ENST00000344627 RAMP2O60895 175 aa12.64□□□□□ -0.39
SGCA-202ENST00000344627 ZMPSTE24O75844 475 aa12.64□□□□□ -0.39
SGCA-202ENST00000344627 LRIG2O94898 1065 aa12.64□□□□□ -0.39
SGCA-202ENST00000344627 MAPKAPK2P49137 400 aa12.64□□□□□ -0.39
SGCA-202ENST00000344627 UCNP55089 124 aa12.64□□□□□ -0.39
SGCA-202ENST00000344627 HDAC4P56524 1084 aa12.64□□□□□ -0.39
SGCA-202ENST00000344627 GEMIN4P57678 1058 aaKnown RBP12.64□□□□□ -0.39
SGCA-202ENST00000344627 TAS2R38P59533 333 aa12.64□□□□□ -0.39
SGCA-202ENST00000344627 ARF5P84085 180 aa12.64□□□□□ -0.39
SGCA-202ENST00000344627 C1QBPQ07021 282 aaKnown RBP12.64□□□□□ -0.39
SGCA-202ENST00000344627 BNIP3Q12983 259 aa12.64□□□□□ -0.39
SGCA-202ENST00000344627 POLD3Q15054 466 aaPredicted RBP12.64□□□□□ -0.39
SGCA-202ENST00000344627 PROX2Q3B8N5 592 aa12.64□□□□□ -0.39
SGCA-202ENST00000344627 FAM72AQ5TYM5 149 aa12.64□□□□□ -0.39
SGCA-202ENST00000344627 FAM72DQ6L9T8 149 aa12.64□□□□□ -0.39
SGCA-202ENST00000344627 KIAA1161Q6NSJ0 714 aa12.64□□□□□ -0.39
SGCA-202ENST00000344627 HORMAD1Q86X24 394 aa12.64□□□□□ -0.39
SGCA-202ENST00000344627 FAM72BQ86X60 149 aa12.64□□□□□ -0.39
SGCA-202ENST00000344627 SPATS2Q86XZ4 545 aaKnown RBP12.64□□□□□ -0.39
SGCA-202ENST00000344627 MARCH9Q86YJ5 346 aa12.64□□□□□ -0.39
SGCA-202ENST00000344627 FAM181AQ8N9Y4 354 aa12.64□□□□□ -0.39
SGCA-202ENST00000344627 C3orf20Q8ND61 904 aa12.64□□□□□ -0.39
SGCA-202ENST00000344627 OR6K2Q8NGY2 324 aa12.64□□□□□ -0.39
SGCA-202ENST00000344627 OR4C6Q8NH72 309 aa12.64□□□□□ -0.39
SGCA-202ENST00000344627 CENPIQ92674 756 aaPredicted RBP12.64□□□□□ -0.39
SGCA-202ENST00000344627 ARHGEF2Q92974 986 aaKnown RBP12.64□□□□□ -0.39
SGCA-202ENST00000344627 MCEEQ96PE7 176 aa12.64□□□□□ -0.39
SGCA-202ENST00000344627 NDFIP2Q9NV92 336 aa12.64□□□□□ -0.39
SGCA-202ENST00000344627 TMEM63CQ9P1W3 806 aa12.64□□□□□ -0.39
SGCA-202ENST00000344627 TEX51A0A1B0GUA7 166 aa12.63□□□□□ -0.39
SGCA-202ENST00000344627 RNF103O00237 685 aa12.63□□□□□ -0.39
SGCA-202ENST00000344627 NEMP1O14524 444 aa12.63□□□□□ -0.39
SGCA-202ENST00000344627 CCP110O43303 1012 aa12.63□□□□□ -0.39
SGCA-202ENST00000344627 BUB1O43683 1085 aa12.63□□□□□ -0.39
SGCA-202ENST00000344627 AP1G1O43747 822 aa12.63□□□□□ -0.39
SGCA-202ENST00000344627 THEGLP0DJG4 465 aa12.63□□□□□ -0.39
SGCA-202ENST00000344627 EPHB2P29323 1055 aa12.63□□□□□ -0.39
SGCA-202ENST00000344627 CCNHP51946 323 aaPredicted RBP12.63□□□□□ -0.39
SGCA-202ENST00000344627 NEK3P51956 506 aa12.63□□□□□ -0.39
SGCA-202ENST00000344627 HNRNPKP61978 463 aaKnown RBP eCLIP12.63□□□□□ -0.39
SGCA-202ENST00000344627 RPS21P63220 83 aaKnown RBP12.63□□□□□ -0.39
SGCA-202ENST00000344627 NRG1Q02297 640 aaPredicted RBP12.63□□□□□ -0.39
SGCA-202ENST00000344627 C19orf57Q0VDD7 668 aa12.63□□□□□ -0.39
SGCA-202ENST00000344627 DNAJC3Q13217 504 aa12.63□□□□□ -0.39
SGCA-202ENST00000344627 ASIC2Q16515 512 aa12.63□□□□□ -0.39
SGCA-202ENST00000344627 ZNF284Q2VY69 593 aa12.63□□□□□ -0.39
SGCA-202ENST00000344627 ACAD10Q6JQN1 1059 aa12.63□□□□□ -0.39
SGCA-202ENST00000344627 CAVIN1Q6NZI2 390 aaKnown RBP12.63□□□□□ -0.39
SGCA-202ENST00000344627 MON1BQ7L1V2 547 aa12.63□□□□□ -0.39
SGCA-202ENST00000344627 PYROXD2Q8N2H3 581 aa12.63□□□□□ -0.39
SGCA-202ENST00000344627 TPCN2Q8NHX9 752 aa12.63□□□□□ -0.39
SGCA-202ENST00000344627 ASB12Q8WXK4 309 aa12.63□□□□□ -0.39
SGCA-202ENST00000344627 RAB7BQ96AH8 199 aa12.63□□□□□ -0.39
SGCA-202ENST00000344627 FEM1CQ96JP0 617 aa12.63□□□□□ -0.39
SGCA-202ENST00000344627 ZNF578Q96N58 590 aaPredicted RBP12.63□□□□□ -0.39
SGCA-202ENST00000344627 CALN1Q9BXU9 219 aa12.63□□□□□ -0.39
SGCA-202ENST00000344627 MAGEH1Q9H213 219 aa12.63□□□□□ -0.39
SGCA-202ENST00000344627 HSD3B7Q9H2F3 369 aa12.63□□□□□ -0.39
SGCA-202ENST00000344627 PRORYQ9H606 182 aa12.63□□□□□ -0.39
SGCA-202ENST00000344627 TMEM248Q9NWD8 314 aa12.63□□□□□ -0.39
SGCA-202ENST00000344627 NLGN3Q9NZ94 848 aa12.63□□□□□ -0.39
SGCA-202ENST00000344627 ZNF212Q9UDV6 495 aa12.63□□□□□ -0.39
SGCA-202ENST00000344627 ZFYVE26Q68DK2 2539 aa12.63□□□□□ -0.39
SGCA-202ENST00000344627 A6NNZ2 444 aa12.62□□□□□ -0.39
SGCA-202ENST00000344627 H3BM21 787 aa12.62□□□□□ -0.39
SGCA-202ENST00000344627 KRIT1O00522 736 aa12.62□□□□□ -0.39
SGCA-202ENST00000344627 TOR1BO14657 336 aa12.62□□□□□ -0.39
SGCA-202ENST00000344627 LZTS3O60299 673 aaPredicted RBP12.62□□□□□ -0.39
SGCA-202ENST00000344627 SDC3O75056 442 aa12.62□□□□□ -0.39
SGCA-202ENST00000344627 ZNF821O75541 412 aaPredicted RBP12.62□□□□□ -0.39
SGCA-202ENST00000344627 CKMT1AP12532 417 aa12.62□□□□□ -0.39
SGCA-202ENST00000344627 DGKAP23743 735 aa12.62□□□□□ -0.39
SGCA-202ENST00000344627 L1CAMP32004 1257 aa12.62□□□□□ -0.39
SGCA-202ENST00000344627 GKP32189 559 aa12.62□□□□□ -0.39
SGCA-202ENST00000344627 ZNF143P52747 638 aaPredicted RBP12.62□□□□□ -0.39
SGCA-202ENST00000344627 CLDN2P57739 230 aa12.62□□□□□ -0.39
SGCA-202ENST00000344627 SNRPD1P62314 119 aaKnown RBP12.62□□□□□ -0.39
SGCA-202ENST00000344627 RPL7AP62424 266 aaKnown RBP12.62□□□□□ -0.39
SGCA-202ENST00000344627 DAB2P98082 770 aa12.62□□□□□ -0.39
SGCA-202ENST00000344627 ARTNQ5T4W7 220 aa12.62□□□□□ -0.39
SGCA-202ENST00000344627 MANEALQ5VSG8 457 aa12.62□□□□□ -0.39
SGCA-202ENST00000344627 SEL1L3Q68CR1 1132 aa12.62□□□□□ -0.39
SGCA-202ENST00000344627 APTXQ7Z2E3 356 aaKnown RBP12.62□□□□□ -0.39
SGCA-202ENST00000344627 ABI3BPQ7Z7G0 1075 aa12.62□□□□□ -0.39
SGCA-202ENST00000344627 NLRP14Q86W24 1093 aa12.62□□□□□ -0.39
SGCA-202ENST00000344627 MCOLN2Q8IZK6 566 aa12.62□□□□□ -0.39
SGCA-202ENST00000344627 WDR48Q8TAF3 677 aa12.62□□□□□ -0.39
SGCA-202ENST00000344627 NTAN1Q96AB6 310 aa12.62□□□□□ -0.39
SGCA-202ENST00000344627 ISG20Q96AZ6 181 aaKnown RBP12.62□□□□□ -0.39
SGCA-202ENST00000344627 ARHGEF26Q96DR7 871 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms