RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 BSNDQ8WZ55 320 aa15.39■□□□□ 0.05
COL11A2-201ENST00000341947 DDX4Q9NQI0 724 aaKnown RBP15.39■□□□□ 0.05
COL11A2-201ENST00000341947 SLC12A4Q9UP95 1085 aa15.39■□□□□ 0.05
COL11A2-201ENST00000341947 ULK2Q8IYT8 1036 aa15.39■□□□□ 0.05
COL11A2-201ENST00000341947 DNAJC18Q9H819 358 aa15.39■□□□□ 0.05
COL11A2-201ENST00000341947 GPN3Q9UHW5 284 aaPredicted RBP15.39■□□□□ 0.05
COL11A2-201ENST00000341947 F8VP50 259 aa15.38■□□□□ 0.05
COL11A2-201ENST00000341947 DCXO43602 365 aa15.38■□□□□ 0.05
COL11A2-201ENST00000341947 GCATO75600 419 aa15.38■□□□□ 0.05
COL11A2-201ENST00000341947 PDE9AO76083 593 aa15.38■□□□□ 0.05
COL11A2-201ENST00000341947 CNGA2Q16280 664 aa15.38■□□□□ 0.05
COL11A2-201ENST00000341947 MZT2AQ6P582 158 aa15.38■□□□□ 0.05
COL11A2-201ENST00000341947 ZCCHC7Q8N3Z6 543 aaKnown RBP15.38■□□□□ 0.05
COL11A2-201ENST00000341947 FBXO6Q9NRD1 293 aaPredicted RBP15.38■□□□□ 0.05
COL11A2-201ENST00000341947 DMGDHQ9UI17 866 aaKnown RBP15.38■□□□□ 0.05
COL11A2-201ENST00000341947 MLYCDO95822 493 aa15.38■□□□□ 0.05
COL11A2-201ENST00000341947 IL1BP01584 269 aa15.38■□□□□ 0.05
COL11A2-201ENST00000341947 IKBIPQ70UQ0 350 aa15.38■□□□□ 0.05
COL11A2-201ENST00000341947 ZC3H7AQ8IWR0 971 aaKnown RBP15.38■□□□□ 0.05
COL11A2-201ENST00000341947 BPIFA1Q9NP55 256 aa15.38■□□□□ 0.05
COL11A2-201ENST00000341947 ADAM28Q9UKQ2 775 aa15.38■□□□□ 0.05
COL11A2-201ENST00000341947 SLC28A1O00337 649 aa15.38■□□□□ 0.05
COL11A2-201ENST00000341947 TNFAIP8O95379 198 aa15.38■□□□□ 0.05
COL11A2-201ENST00000341947 C15orf59Q2T9L4 293 aaPredicted RBP15.38■□□□□ 0.05
COL11A2-201ENST00000341947 KIAA0408Q6ZU52 694 aa15.38■□□□□ 0.05
COL11A2-201ENST00000341947 TTC7BQ86TV6 843 aa15.38■□□□□ 0.05
COL11A2-201ENST00000341947 RNF148Q8N7C7 305 aa15.38■□□□□ 0.05
COL11A2-201ENST00000341947 GSTK1Q9Y2Q3 226 aa15.38■□□□□ 0.05
COL11A2-201ENST00000341947 RIMBP3CA6NJZ7 1639 aa15.38■□□□□ 0.05
COL11A2-201ENST00000341947 RIMBP3BA6NNM3 1639 aa15.38■□□□□ 0.05
COL11A2-201ENST00000341947 RIMBP3Q9UFD9 1639 aa15.38■□□□□ 0.05
COL11A2-201ENST00000341947 NELL1Q92832 810 aa15.38■□□□□ 0.05
COL11A2-201ENST00000341947 ZFRQ96KR1 1074 aaKnown RBP15.38■□□□□ 0.05
COL11A2-201ENST00000341947 HSFY1Q96LI6 401 aa15.38■□□□□ 0.05
COL11A2-201ENST00000341947 FERD3LQ96RJ6 166 aa15.38■□□□□ 0.05
COL11A2-201ENST00000341947 RPS6KA6Q9UK32 745 aa15.38■□□□□ 0.05
COL11A2-201ENST00000341947 ZNF143P52747 638 aaPredicted RBP15.38■□□□□ 0.05
COL11A2-201ENST00000341947 ARMC8Q8IUR7 673 aa15.38■□□□□ 0.05
COL11A2-201ENST00000341947 SIX5Q8N196 739 aa15.38■□□□□ 0.05
COL11A2-201ENST00000341947 PTGR2Q8N8N7 351 aaPredicted RBP15.38■□□□□ 0.05
COL11A2-201ENST00000341947 FBXO30Q8TB52 745 aa15.38■□□□□ 0.05
COL11A2-201ENST00000341947 MYLK2Q9H1R3 596 aa15.38■□□□□ 0.05
COL11A2-201ENST00000341947 RNF19AQ9NV58 838 aa15.38■□□□□ 0.05
COL11A2-201ENST00000341947 FZD1Q9UP38 647 aa15.38■□□□□ 0.05
COL11A2-201ENST00000341947 COG5Q9UP83 839 aa15.38■□□□□ 0.05
COL11A2-201ENST00000341947 NWD1Q149M9 1564 aa15.37■□□□□ 0.05
COL11A2-201ENST00000341947 PTGES3LE9PB15 166 aa15.37■□□□□ 0.05
COL11A2-201ENST00000341947 CCNB1P14635 433 aa15.37■□□□□ 0.05
COL11A2-201ENST00000341947 CCL23P55773 120 aa15.37■□□□□ 0.05
COL11A2-201ENST00000341947 DDX20Q9UHI6 824 aaKnown RBP15.37■□□□□ 0.05
COL11A2-201ENST00000341947 USP32Q8NFA0 1604 aa15.37■□□□□ 0.05
COL11A2-201ENST00000341947 CCDC166P0CW27 439 aa15.37■□□□□ 0.05
COL11A2-201ENST00000341947 SP3Q02447 781 aa15.37■□□□□ 0.05
COL11A2-201ENST00000341947 NPNTQ6UXI9 565 aa15.37■□□□□ 0.05
COL11A2-201ENST00000341947 ETNPPLQ8TBG4 499 aa15.37■□□□□ 0.05
COL11A2-201ENST00000341947 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.37■□□□□ 0.05
COL11A2-201ENST00000341947 BTBD7Q9P203 1132 aa15.37■□□□□ 0.05
COL11A2-201ENST00000341947 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.37■□□□□ 0.05
COL11A2-201ENST00000341947 GSAPA4D1B5 854 aa15.37■□□□□ 0.05
COL11A2-201ENST00000341947 ALOX12P18054 663 aa15.37■□□□□ 0.05
COL11A2-201ENST00000341947 APOBEC3HQ6NTF7 200 aaKnown RBP15.37■□□□□ 0.05
COL11A2-201ENST00000341947 CHPFQ8IZ52 775 aa15.37■□□□□ 0.05
COL11A2-201ENST00000341947 KIAA0319LQ8IZA0 1049 aa15.37■□□□□ 0.05
COL11A2-201ENST00000341947 SMYD1Q8NB12 490 aa15.37■□□□□ 0.05
COL11A2-201ENST00000341947 SH3GLB1Q9Y371 365 aa15.37■□□□□ 0.05
COL11A2-201ENST00000341947 C1orf232A0A0U1RR37 186 aa15.37■□□□□ 0.05
COL11A2-201ENST00000341947 SQLEQ14534 574 aa15.37■□□□□ 0.05
COL11A2-201ENST00000341947 SPANXN2Q5MJ10 180 aa15.37■□□□□ 0.05
COL11A2-201ENST00000341947 ZNF549Q6P9A3 640 aa15.37■□□□□ 0.05
COL11A2-201ENST00000341947 LRRC49Q8IUZ0 686 aa15.37■□□□□ 0.05
COL11A2-201ENST00000341947 TM6SF2Q9BZW4 377 aa15.37■□□□□ 0.05
COL11A2-201ENST00000341947 CYLDQ9NQC7 956 aa15.37■□□□□ 0.05
COL11A2-201ENST00000341947 VPS4AQ9UN37 437 aa15.37■□□□□ 0.05
COL11A2-201ENST00000341947 L1RE1Q9UN81 338 aa15.37■□□□□ 0.05
COL11A2-201ENST00000341947 LMTK2Q8IWU2 1503 aa15.37■□□□□ 0.05
COL11A2-201ENST00000341947 ASNA1O43681 348 aa15.37■□□□□ 0.05
COL11A2-201ENST00000341947 GLRA2P23416 452 aa15.37■□□□□ 0.05
COL11A2-201ENST00000341947 RPL4P36578 427 aaKnown RBP15.37■□□□□ 0.05
COL11A2-201ENST00000341947 COPS5Q92905 334 aa15.37■□□□□ 0.05
COL11A2-201ENST00000341947 TRAPPC9Q96Q05 1148 aa15.37■□□□□ 0.05
COL11A2-201ENST00000341947 FKTNO75072 461 aa15.36■□□□□ 0.05
COL11A2-201ENST00000341947 ASGR1P07306 291 aa15.36■□□□□ 0.05
COL11A2-201ENST00000341947 RPL9P32969 192 aaKnown RBP15.36■□□□□ 0.05
COL11A2-201ENST00000341947 PPM1AP35813 382 aa15.36■□□□□ 0.05
COL11A2-201ENST00000341947 PSMD4P55036 377 aaKnown RBP15.36■□□□□ 0.05
COL11A2-201ENST00000341947 XKR6Q5GH73 641 aa15.36■□□□□ 0.05
COL11A2-201ENST00000341947 PRAMEF19Q5SWL8 479 aa15.36■□□□□ 0.05
COL11A2-201ENST00000341947 PPP3R2Q96LZ3 170 aa15.36■□□□□ 0.05
COL11A2-201ENST00000341947 SEMA6AQ9H2E6 1030 aa15.36■□□□□ 0.05
COL11A2-201ENST00000341947 KCNK4Q9NYG8 393 aa15.36■□□□□ 0.05
COL11A2-201ENST00000341947 PGK1P00558 417 aa15.36■□□□□ 0.05
COL11A2-201ENST00000341947 NTRK1P04629 796 aa15.36■□□□□ 0.05
COL11A2-201ENST00000341947 CCNA2P20248 432 aa15.36■□□□□ 0.05
COL11A2-201ENST00000341947 STAT5AP42229 794 aa15.36■□□□□ 0.05
COL11A2-201ENST00000341947 CACNA2D1P54289 1103 aa15.36■□□□□ 0.05
COL11A2-201ENST00000341947 TAB1Q15750 504 aa15.36■□□□□ 0.05
COL11A2-201ENST00000341947 TIMM50Q3ZCQ8 353 aa15.36■□□□□ 0.05
COL11A2-201ENST00000341947 RPTNQ6XPR3 784 aa15.36■□□□□ 0.05
COL11A2-201ENST00000341947 C8orf59Q8N0T1 100 aaPredicted RBP15.36■□□□□ 0.05
COL11A2-201ENST00000341947 SLC4A5Q9BY07 1137 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms