RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 GOLGA8QA0A0J9YX86 632 aa16.53■□□□□ 0.24
LITAF-201ENST00000339430 GOLGA8OA6NCC3 632 aa16.53■□□□□ 0.24
LITAF-201ENST00000339430 GOLGA8NF8WBI6 632 aa16.53■□□□□ 0.24
LITAF-201ENST00000339430 ANPEPP15144 967 aa16.53■□□□□ 0.24
LITAF-201ENST00000339430 PBX3P40426 434 aa16.53■□□□□ 0.24
LITAF-201ENST00000339430 CSE1LP55060 971 aaKnown RBP16.53■□□□□ 0.24
LITAF-201ENST00000339430 CTBP1Q13363 440 aa16.53■□□□□ 0.24
LITAF-201ENST00000339430 USP10Q14694 798 aaKnown RBP16.53■□□□□ 0.24
LITAF-201ENST00000339430 FAM171BQ6P995 826 aa16.53■□□□□ 0.24
LITAF-201ENST00000339430 SLC41A1Q8IVJ1 513 aa16.53■□□□□ 0.24
LITAF-201ENST00000339430 DENND6AQ8IWF6 608 aa16.53■□□□□ 0.24
LITAF-201ENST00000339430 KBTBD2Q8IY47 623 aa16.53■□□□□ 0.24
LITAF-201ENST00000339430 TDRD5Q8NAT2 981 aaKnown RBP16.53■□□□□ 0.24
LITAF-201ENST00000339430 PPFIBP2Q8ND30 876 aa16.53■□□□□ 0.24
LITAF-201ENST00000339430 SCYL1Q96KG9 808 aa16.53■□□□□ 0.24
LITAF-201ENST00000339430 ACBD6Q9BR61 282 aa16.53■□□□□ 0.24
LITAF-201ENST00000339430 GATA5Q9BWX5 397 aaPredicted RBP16.53■□□□□ 0.24
LITAF-201ENST00000339430 MRPL9Q9BYD2 267 aaKnown RBP16.53■□□□□ 0.24
LITAF-201ENST00000339430 ATXN3LQ9H3M9 355 aa16.53■□□□□ 0.24
LITAF-201ENST00000339430 ZNF212Q9UDV6 495 aa16.53■□□□□ 0.24
LITAF-201ENST00000339430 NEU3Q9UQ49 428 aa16.53■□□□□ 0.24
LITAF-201ENST00000339430 NYNRINQ9P2P1 1898 aaKnown RBP16.53■□□□□ 0.24
LITAF-201ENST00000339430 ABHD14A-ACY1A0A1B0GW23 586 aa16.53■□□□□ 0.24
LITAF-201ENST00000339430 NEMP1O14524 444 aa16.53■□□□□ 0.24
LITAF-201ENST00000339430 ZBTB14O43829 449 aa16.53■□□□□ 0.24
LITAF-201ENST00000339430 TRIM13O60858 407 aa16.53■□□□□ 0.24
LITAF-201ENST00000339430 PAGE1O75459 146 aa16.53■□□□□ 0.24
LITAF-201ENST00000339430 TADA2AO75478 443 aa16.53■□□□□ 0.24
LITAF-201ENST00000339430 MOCS2O96007 188 aaPredicted RBP16.53■□□□□ 0.24
LITAF-201ENST00000339430 ALDH2P05091 517 aa16.53■□□□□ 0.24
LITAF-201ENST00000339430 CYP11A1P05108 521 aa16.53■□□□□ 0.24
LITAF-201ENST00000339430 PAX3P23760 479 aa16.53■□□□□ 0.24
LITAF-201ENST00000339430 MPSTP25325 297 aa16.53■□□□□ 0.24
LITAF-201ENST00000339430 MPP1Q00013 466 aa16.53■□□□□ 0.24
LITAF-201ENST00000339430 OVOS1Q6IE37 1185 aa16.53■□□□□ 0.24
LITAF-201ENST00000339430 FAM117BQ6P1L5 589 aa16.53■□□□□ 0.24
LITAF-201ENST00000339430 ZC3HC1Q86WB0 502 aaKnown RBP16.53■□□□□ 0.24
LITAF-201ENST00000339430 MYLK4Q86YV6 388 aaPredicted RBP16.53■□□□□ 0.24
LITAF-201ENST00000339430 SPNS2Q8IVW8 549 aa16.53■□□□□ 0.24
LITAF-201ENST00000339430 ARHGAP12Q8IWW6 846 aa16.53■□□□□ 0.24
LITAF-201ENST00000339430 SPATA6LQ8N4H0 392 aa16.53■□□□□ 0.24
LITAF-201ENST00000339430 UCMAQ8WVF2 138 aa16.53■□□□□ 0.24
LITAF-201ENST00000339430 IRGQQ8WZA9 623 aa16.53■□□□□ 0.24
LITAF-201ENST00000339430 SPDL1Q96EA4 605 aa16.53■□□□□ 0.24
LITAF-201ENST00000339430 TBL1YQ9BQ87 522 aa16.53■□□□□ 0.24
LITAF-201ENST00000339430 MCMBPQ9BTE3 642 aa16.53■□□□□ 0.24
LITAF-201ENST00000339430 FICDQ9BVA6 458 aa16.53■□□□□ 0.24
LITAF-201ENST00000339430 ACE2Q9BYF1 805 aaPredicted RBP16.53■□□□□ 0.24
LITAF-201ENST00000339430 TLK1Q9UKI8 766 aa16.53■□□□□ 0.24
LITAF-201ENST00000339430 DSEQ9UL01 958 aa16.53■□□□□ 0.24
LITAF-201ENST00000339430 PPM1HQ9ULR3 514 aa16.53■□□□□ 0.24
LITAF-201ENST00000339430 CDY1Q9Y6F8 540 aa16.53■□□□□ 0.24
LITAF-201ENST00000339430 TMEM189-UBE2V1I3L0A0 370 aa16.52■□□□□ 0.24
LITAF-201ENST00000339430 MAP3K7O43318 606 aa16.52■□□□□ 0.24
LITAF-201ENST00000339430 ZNF189O75820 626 aaPredicted RBP16.52■□□□□ 0.24
LITAF-201ENST00000339430 AHSGP02765 367 aa16.52■□□□□ 0.24
LITAF-201ENST00000339430 CD1EP15812 388 aa16.52■□□□□ 0.24
LITAF-201ENST00000339430 GABRB3P28472 473 aa16.52■□□□□ 0.24
LITAF-201ENST00000339430 COG7P83436 770 aa16.52■□□□□ 0.24
LITAF-201ENST00000339430 CUL3Q13618 768 aa16.52■□□□□ 0.24
LITAF-201ENST00000339430 FRG1Q14331 258 aaKnown RBP16.52■□□□□ 0.24
LITAF-201ENST00000339430 ANO4Q32M45 955 aa16.52■□□□□ 0.24
LITAF-201ENST00000339430 EPGNQ6UW88 154 aa16.52■□□□□ 0.24
LITAF-201ENST00000339430 FRMD7Q6ZUT3 714 aa16.52■□□□□ 0.24
LITAF-201ENST00000339430 KCTD4Q8WVF5 259 aa16.52■□□□□ 0.24
LITAF-201ENST00000339430 CCDC124Q96CT7 223 aaKnown RBP16.52■□□□□ 0.24
LITAF-201ENST00000339430 OR52B2Q96RD2 323 aa16.52■□□□□ 0.24
LITAF-201ENST00000339430 SLC39A8Q9C0K1 460 aa16.52■□□□□ 0.24
LITAF-201ENST00000339430 FAM96AQ9H5X1 160 aa16.52■□□□□ 0.24
LITAF-201ENST00000339430 ANGPTL2Q9UKU9 493 aa16.52■□□□□ 0.24
LITAF-201ENST00000339430 G3BP2Q9UN86 482 aaKnown RBP16.52■□□□□ 0.24
LITAF-201ENST00000339430 FNDC1Q4ZHG4 1894 aaPredicted RBP16.52■□□□□ 0.24
LITAF-201ENST00000339430 PTPRDP23468 1912 aa16.52■□□□□ 0.24
LITAF-201ENST00000339430 NT5C1B-RDH14C9J2C7 533 aa16.52■□□□□ 0.23
LITAF-201ENST00000339430 PMPCBO75439 489 aa16.52■□□□□ 0.23
LITAF-201ENST00000339430 VAPBO95292 243 aa16.52■□□□□ 0.23
LITAF-201ENST00000339430 SLC11A1P49279 550 aa16.52■□□□□ 0.23
LITAF-201ENST00000339430 DEFB103AP81534 67 aa16.52■□□□□ 0.23
LITAF-201ENST00000339430 CMPK2Q5EBM0 449 aa16.52■□□□□ 0.23
LITAF-201ENST00000339430 BTBD8Q5XKL5 378 aa16.52■□□□□ 0.23
LITAF-201ENST00000339430 ESRP1Q6NXG1 681 aaKnown RBP16.52■□□□□ 0.23
LITAF-201ENST00000339430 LRRC43Q8N309 656 aa16.52■□□□□ 0.23
LITAF-201ENST00000339430 CASP10Q92851 521 aa16.52■□□□□ 0.23
LITAF-201ENST00000339430 TOP1MTQ969P6 601 aa16.52■□□□□ 0.23
LITAF-201ENST00000339430 GPR22Q99680 433 aa16.52■□□□□ 0.23
LITAF-201ENST00000339430 KIFC1Q9BW19 673 aa16.52■□□□□ 0.23
LITAF-201ENST00000339430 WDR55Q9H6Y2 383 aaPredicted RBP16.52■□□□□ 0.23
LITAF-201ENST00000339430 OXSMQ9NWU1 459 aa16.52■□□□□ 0.23
LITAF-201ENST00000339430 SLC2A6Q9UGQ3 507 aa16.52■□□□□ 0.23
LITAF-201ENST00000339430 PCDHB8Q9UN66 801 aa16.52■□□□□ 0.23
LITAF-201ENST00000339430 RUVBL2Q9Y230 463 aaKnown RBP16.52■□□□□ 0.23
LITAF-201ENST00000339430 NLRC5Q86WI3 1866 aa16.52■□□□□ 0.23
LITAF-201ENST00000339430 IRAK2O43187 625 aa16.51■□□□□ 0.23
LITAF-201ENST00000339430 OR4Q2P0C623 313 aa16.51■□□□□ 0.23
LITAF-201ENST00000339430 TUBP50607 506 aa16.51■□□□□ 0.23
LITAF-201ENST00000339430 AP2B1P63010 937 aa16.51■□□□□ 0.23
LITAF-201ENST00000339430 KLC1Q07866 573 aa16.51■□□□□ 0.23
LITAF-201ENST00000339430 CAPRIN2Q6IMN6 1127 aaKnown RBP16.51■□□□□ 0.23
LITAF-201ENST00000339430 OTOP2Q7RTS6 562 aa16.51■□□□□ 0.23
LITAF-201ENST00000339430 LINC00523Q86TU6 105 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms