RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

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Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 HLA-DPA1P20036 260 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 FOXN2P32314 431 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 CA8P35219 290 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 CD86P42081 329 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 SERPINH1P50454 418 aaKnown RBP16.47■□□□□ 0.23
HPS1-202ENST00000338546 INSCQ1MX18 579 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 KIAA0930Q6ICG6 404 aaPredicted RBP16.47■□□□□ 0.23
HPS1-202ENST00000338546 C6orf89Q6UWU4 347 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 HTR3DQ70Z44 454 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 GAREM2Q75VX8 874 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 TRIM42Q8IWZ5 723 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 CPXM2Q8N436 756 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 ARL14EPQ8N8R7 260 aaPredicted RBP16.47■□□□□ 0.23
HPS1-202ENST00000338546 SRPK1Q96SB4 655 aaKnown RBP16.47■□□□□ 0.23
HPS1-202ENST00000338546 RBBP8Q99708 897 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 TRPC7Q9HCX4 862 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 C20orf96Q9NUD7 363 aaPredicted RBP16.47■□□□□ 0.23
HPS1-202ENST00000338546 CPQQ9Y646 472 aa16.47■□□□□ 0.23
HPS1-202ENST00000338546 MTCL1Q9Y4B5 1905 aaKnown RBP16.46■□□□□ 0.23
HPS1-202ENST00000338546 A0A0D9SEW6 157 aa16.46■□□□□ 0.23
HPS1-202ENST00000338546 SNX3O60493 162 aa16.46■□□□□ 0.23
HPS1-202ENST00000338546 SPATA31D3P0C874 917 aa16.46■□□□□ 0.23
HPS1-202ENST00000338546 IRF1P10914 325 aa16.46■□□□□ 0.23
HPS1-202ENST00000338546 NMBRP28336 390 aa16.46■□□□□ 0.23
HPS1-202ENST00000338546 CTNNB1P35222 781 aa16.46■□□□□ 0.23
HPS1-202ENST00000338546 MAGEA12P43365 314 aa16.46■□□□□ 0.23
HPS1-202ENST00000338546 LIMK2P53671 638 aa16.46■□□□□ 0.23
HPS1-202ENST00000338546 EPHA5P54756 1037 aa16.46■□□□□ 0.23
HPS1-202ENST00000338546 ERVFC1P60507 584 aa16.46■□□□□ 0.23
HPS1-202ENST00000338546 MPP7Q5T2T1 576 aa16.46■□□□□ 0.23
HPS1-202ENST00000338546 TXNDC8Q6A555 127 aa16.46■□□□□ 0.23
HPS1-202ENST00000338546 CES3Q6UWW8 571 aa16.46■□□□□ 0.23
HPS1-202ENST00000338546 KYAT3Q6YP21 454 aaKnown RBP16.46■□□□□ 0.23
HPS1-202ENST00000338546 SPATA31D4Q6ZUB0 917 aa16.46■□□□□ 0.23
HPS1-202ENST00000338546 PGBD5Q8N414 524 aa16.46■□□□□ 0.23
HPS1-202ENST00000338546 LEMD2Q8NC56 503 aa16.46■□□□□ 0.23
HPS1-202ENST00000338546 SPPL3Q8TCT6 385 aa16.46■□□□□ 0.23
HPS1-202ENST00000338546 ADAMTS19Q8TE59 1207 aa16.46■□□□□ 0.23
HPS1-202ENST00000338546 KLF6Q99612 283 aaPredicted RBP16.46■□□□□ 0.23
HPS1-202ENST00000338546 MCMBPQ9BTE3 642 aa16.46■□□□□ 0.23
HPS1-202ENST00000338546 ASAH2Q9NR71 780 aa16.46■□□□□ 0.23
HPS1-202ENST00000338546 TLR9Q9NR96 1032 aa16.46■□□□□ 0.23
HPS1-202ENST00000338546 TREX1Q9NSU2 369 aa16.46■□□□□ 0.23
HPS1-202ENST00000338546 DCDC2Q9UHG0 476 aa16.46■□□□□ 0.23
HPS1-202ENST00000338546 STARD13Q9Y3M8 1113 aa16.46■□□□□ 0.23
HPS1-202ENST00000338546 ARIH1Q9Y4X5 557 aaPredicted RBP16.46■□□□□ 0.23
HPS1-202ENST00000338546 CXorf51AA0A1B0GTR3 108 aa16.45■□□□□ 0.22
HPS1-202ENST00000338546 KLF11O14901 512 aa16.45■□□□□ 0.22
HPS1-202ENST00000338546 FGF1P05230 155 aa16.45■□□□□ 0.22
HPS1-202ENST00000338546 SERPINF2P08697 491 aa16.45■□□□□ 0.22
HPS1-202ENST00000338546 HOXA9P31269 272 aa16.45■□□□□ 0.22
HPS1-202ENST00000338546 PDE1BQ01064 536 aa16.45■□□□□ 0.22
HPS1-202ENST00000338546 DSC2Q02487 901 aa16.45■□□□□ 0.22
HPS1-202ENST00000338546 BMPR2Q13873 1038 aa16.45■□□□□ 0.22
HPS1-202ENST00000338546 HSP90AA5PQ58FG0 334 aa16.45■□□□□ 0.22
HPS1-202ENST00000338546 RALGPS1Q5JS13 557 aa16.45■□□□□ 0.22
HPS1-202ENST00000338546 PPM1LQ5SGD2 360 aa16.45■□□□□ 0.22
HPS1-202ENST00000338546 CXorf57Q6NSI4 855 aaKnown RBP16.45■□□□□ 0.22
HPS1-202ENST00000338546 STRA8Q7Z7C7 330 aa16.45■□□□□ 0.22
HPS1-202ENST00000338546 NDUFAF2Q8N183 169 aa16.45■□□□□ 0.22
HPS1-202ENST00000338546 OR7D4Q8NG98 312 aa16.45■□□□□ 0.22
HPS1-202ENST00000338546 RAB3IL1Q8TBN0 382 aa16.45■□□□□ 0.22
HPS1-202ENST00000338546 TMA16Q96EY4 203 aaKnown RBP16.45■□□□□ 0.22
HPS1-202ENST00000338546 SLC22A12Q96S37 553 aa16.45■□□□□ 0.22
HPS1-202ENST00000338546 CYP2S1Q96SQ9 504 aa16.45■□□□□ 0.22
HPS1-202ENST00000338546 SEMA3CQ99985 751 aa16.45■□□□□ 0.22
HPS1-202ENST00000338546 CINPQ9BW66 212 aaPredicted RBP16.45■□□□□ 0.22
HPS1-202ENST00000338546 PITPNM3Q9BZ71 974 aa16.45■□□□□ 0.22
HPS1-202ENST00000338546 MCOLN1Q9GZU1 580 aa16.45■□□□□ 0.22
HPS1-202ENST00000338546 FGFR1OP2Q9NVK5 253 aa16.45■□□□□ 0.22
HPS1-202ENST00000338546 SMPD4Q9NXE4 827 aa16.45■□□□□ 0.22
HPS1-202ENST00000338546 ZMYM5Q9UJ78 669 aa16.45■□□□□ 0.22
HPS1-202ENST00000338546 RIMKLBQ9ULI2 386 aa16.45■□□□□ 0.22
HPS1-202ENST00000338546 GRID1Q9ULK0 1009 aa16.45■□□□□ 0.22
HPS1-202ENST00000338546 BIRC5O15392 142 aa16.44■□□□□ 0.22
HPS1-202ENST00000338546 GLRA3O75311 464 aa16.44■□□□□ 0.22
HPS1-202ENST00000338546 LUC7L3O95232 432 aaKnown RBP16.44■□□□□ 0.22
HPS1-202ENST00000338546 IL1BP01584 269 aa16.44■□□□□ 0.22
HPS1-202ENST00000338546 MPOP05164 745 aa16.44■□□□□ 0.22
HPS1-202ENST00000338546 GSTA1P08263 222 aa16.44■□□□□ 0.22
HPS1-202ENST00000338546 DNAJB1P25685 340 aa16.44■□□□□ 0.22
HPS1-202ENST00000338546 ARCN1P48444 511 aaKnown RBP16.44■□□□□ 0.22
HPS1-202ENST00000338546 SERPINB8P50452 374 aa16.44■□□□□ 0.22
HPS1-202ENST00000338546 CLCN4P51793 760 aa16.44■□□□□ 0.22
HPS1-202ENST00000338546 MAXP61244 160 aa16.44■□□□□ 0.22
HPS1-202ENST00000338546 CDK18Q07002 472 aa16.44■□□□□ 0.22
HPS1-202ENST00000338546 MSLNQ13421 630 aaPredicted RBP16.44■□□□□ 0.22
HPS1-202ENST00000338546 POU6F1Q14863 301 aa16.44■□□□□ 0.22
HPS1-202ENST00000338546 INO80DQ53TQ3 878 aaPredicted RBP16.44■□□□□ 0.22
HPS1-202ENST00000338546 PDE12Q6L8Q7 609 aaKnown RBP16.44■□□□□ 0.22
HPS1-202ENST00000338546 KIAA0408Q6ZU52 694 aa16.44■□□□□ 0.22
HPS1-202ENST00000338546 LCA5Q86VQ0 697 aa16.44■□□□□ 0.22
HPS1-202ENST00000338546 LMNTD2Q8IXW0 634 aa16.44■□□□□ 0.22
HPS1-202ENST00000338546 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.44■□□□□ 0.22
HPS1-202ENST00000338546 CALML6Q8TD86 181 aa16.44■□□□□ 0.22
HPS1-202ENST00000338546 POF1BQ8WVV4 589 aa16.44■□□□□ 0.22
HPS1-202ENST00000338546 ZNF75CPQ92670 426 aaPredicted RBP16.44■□□□□ 0.22
HPS1-202ENST00000338546 WBP2Q969T9 261 aa16.44■□□□□ 0.22
HPS1-202ENST00000338546 ELAC2Q9BQ52 826 aaKnown RBP16.44■□□□□ 0.22
HPS1-202ENST00000338546 FAM167BQ9BTA0 163 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms