RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 GSTT1P30711 240 aa13.22□□□□□ -0.29
HLCS-201ENST00000336648 SLC26A3P40879 764 aa13.22□□□□□ -0.29
HLCS-201ENST00000336648 IRF8Q02556 426 aa13.22□□□□□ -0.29
HLCS-201ENST00000336648 TBX2Q13207 712 aaPredicted RBP13.22□□□□□ -0.29
HLCS-201ENST00000336648 DENND5AQ6IQ26 1287 aa13.22□□□□□ -0.29
HLCS-201ENST00000336648 PIWIL4Q7Z3Z4 852 aaKnown RBP13.22□□□□□ -0.29
HLCS-201ENST00000336648 PCDHGA4Q9Y5G9 962 aa13.22□□□□□ -0.29
HLCS-201ENST00000336648 AMHP03971 560 aa13.22□□□□□ -0.29
HLCS-201ENST00000336648 PEX6Q13608 980 aa13.22□□□□□ -0.29
HLCS-201ENST00000336648 PAN2Q504Q3 1202 aaKnown RBP13.22□□□□□ -0.29
HLCS-201ENST00000336648 R3HCC1LQ7Z5L2 792 aaKnown RBP13.22□□□□□ -0.29
HLCS-201ENST00000336648 MSL3Q8N5Y2 521 aaKnown RBP13.22□□□□□ -0.29
HLCS-201ENST00000336648 EDEM1Q92611 657 aa13.22□□□□□ -0.29
HLCS-201ENST00000336648 ZKSCAN4Q969J2 545 aaPredicted RBP13.22□□□□□ -0.29
HLCS-201ENST00000336648 TDRKHQ9Y2W6 561 aaKnown RBP13.22□□□□□ -0.29
HLCS-201ENST00000336648 DDX3XO00571 662 aaKnown RBP eCLIP13.21□□□□□ -0.29
HLCS-201ENST00000336648 SEC24AO95486 1093 aa13.21□□□□□ -0.29
HLCS-201ENST00000336648 PROCP04070 461 aa13.21□□□□□ -0.29
HLCS-201ENST00000336648 TCF4P15884 667 aa13.21□□□□□ -0.29
HLCS-201ENST00000336648 PTPN1P18031 435 aaKnown RBP13.21□□□□□ -0.29
HLCS-201ENST00000336648 POLR2EP19388 210 aaKnown RBP13.21□□□□□ -0.29
HLCS-201ENST00000336648 MAPK10P53779 464 aa13.21□□□□□ -0.29
HLCS-201ENST00000336648 ZNF846Q147U1 533 aa13.21□□□□□ -0.29
HLCS-201ENST00000336648 MREGQ8N565 214 aa13.21□□□□□ -0.29
HLCS-201ENST00000336648 SELENOMQ8WWX9 145 aa13.21□□□□□ -0.29
HLCS-201ENST00000336648 GRIP2Q9C0E4 1043 aa13.21□□□□□ -0.29
HLCS-201ENST00000336648 SPAG4Q9NPE6 437 aa13.21□□□□□ -0.29
HLCS-201ENST00000336648 MORF4L1Q9UBU8 362 aa13.21□□□□□ -0.29
HLCS-201ENST00000336648 PCYOX1Q9UHG3 505 aa13.21□□□□□ -0.29
HLCS-201ENST00000336648 FAM92AA1XBS5 289 aa13.21□□□□□ -0.29
HLCS-201ENST00000336648 PTGES3LE9PB15 166 aa13.21□□□□□ -0.29
HLCS-201ENST00000336648 ADCY6O43306 1168 aa13.21□□□□□ -0.29
HLCS-201ENST00000336648 NUDT14O95848 222 aa13.21□□□□□ -0.29
HLCS-201ENST00000336648 CDH3P22223 829 aa13.21□□□□□ -0.29
HLCS-201ENST00000336648 GMFBP60983 142 aa13.21□□□□□ -0.29
HLCS-201ENST00000336648 TAF5Q15542 800 aa13.21□□□□□ -0.29
HLCS-201ENST00000336648 SWI5Q1ZZU3 235 aa13.21□□□□□ -0.29
HLCS-201ENST00000336648 SCAIQ8N9R8 606 aa13.21□□□□□ -0.29
HLCS-201ENST00000336648 BHLHE22Q8NFJ8 381 aaPredicted RBP13.21□□□□□ -0.29
HLCS-201ENST00000336648 C2CD2Q9Y426 696 aa13.21□□□□□ -0.29
HLCS-201ENST00000336648 FMO4P31512 558 aa13.21□□□□□ -0.29
HLCS-201ENST00000336648 DRG2P55039 364 aaKnown RBP13.21□□□□□ -0.29
HLCS-201ENST00000336648 ATP6V0D1P61421 351 aa13.21□□□□□ -0.29
HLCS-201ENST00000336648 FBXW8Q8N3Y1 598 aa13.21□□□□□ -0.29
HLCS-201ENST00000336648 CCDC115Q96NT0 180 aa13.21□□□□□ -0.29
HLCS-201ENST00000336648 ABHD16BQ9H3Z7 469 aa13.21□□□□□ -0.29
HLCS-201ENST00000336648 CAB39LQ9H9S4 337 aa13.21□□□□□ -0.29
HLCS-201ENST00000336648 GAKO14976 1311 aa13.21□□□□□ -0.3
HLCS-201ENST00000336648 PDE2AO00408 941 aaPredicted RBP13.21□□□□□ -0.3
HLCS-201ENST00000336648 IL1R1P14778 569 aa13.21□□□□□ -0.3
HLCS-201ENST00000336648 PCSK2P16519 638 aa13.21□□□□□ -0.3
HLCS-201ENST00000336648 S100GP29377 79 aa13.21□□□□□ -0.3
HLCS-201ENST00000336648 NTRK3Q16288 839 aa13.21□□□□□ -0.3
HLCS-201ENST00000336648 AAGABQ6PD74 315 aa13.21□□□□□ -0.3
HLCS-201ENST00000336648 PJA1Q8NG27 643 aa13.21□□□□□ -0.3
HLCS-201ENST00000336648 NELL1Q92832 810 aa13.21□□□□□ -0.3
HLCS-201ENST00000336648 CD101Q93033 1021 aa13.21□□□□□ -0.3
HLCS-201ENST00000336648 PRMT6Q96LA8 375 aaPredicted RBP13.21□□□□□ -0.3
HLCS-201ENST00000336648 DGCR6LQ9BY27 220 aa13.21□□□□□ -0.3
HLCS-201ENST00000336648 ZNF304Q9HCX3 659 aa13.21□□□□□ -0.3
HLCS-201ENST00000336648 ABCB10Q9NRK6 738 aa13.21□□□□□ -0.3
HLCS-201ENST00000336648 ERGIC3Q9Y282 383 aa13.21□□□□□ -0.3
HLCS-201ENST00000336648 ZSCAN5CA6NGD5 496 aaPredicted RBP13.21□□□□□ -0.3
HLCS-201ENST00000336648 MT-CO1P00395 513 aa13.21□□□□□ -0.3
HLCS-201ENST00000336648 AKR1A1P14550 325 aa13.21□□□□□ -0.3
HLCS-201ENST00000336648 ARF3P61204 181 aaPredicted RBP13.21□□□□□ -0.3
HLCS-201ENST00000336648 ARF1P84077 181 aaKnown RBP13.21□□□□□ -0.3
HLCS-201ENST00000336648 CYP2R1Q6VVX0 501 aa13.21□□□□□ -0.3
HLCS-201ENST00000336648 TFAP2DQ7Z6R9 452 aa13.21□□□□□ -0.3
HLCS-201ENST00000336648 EFHD2Q96C19 240 aaPredicted RBP13.21□□□□□ -0.3
HLCS-201ENST00000336648 DNAJC1Q96KC8 554 aaKnown RBP13.21□□□□□ -0.3
HLCS-201ENST00000336648 MRPL57Q9BQC6 102 aaKnown RBP13.21□□□□□ -0.3
HLCS-201ENST00000336648 LRMDAQ9H2I8 198 aa13.21□□□□□ -0.3
HLCS-201ENST00000336648 DSN1Q9H410 356 aa13.21□□□□□ -0.3
HLCS-201ENST00000336648 ZMYM5Q9UJ78 669 aa13.21□□□□□ -0.3
HLCS-201ENST00000336648 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.21□□□□□ -0.3
HLCS-201ENST00000336648 HAT1O14929 419 aa13.2□□□□□ -0.3
HLCS-201ENST00000336648 CABYRO75952 493 aa13.2□□□□□ -0.3
HLCS-201ENST00000336648 APOC1P02654 83 aa13.2□□□□□ -0.3
HLCS-201ENST00000336648 SNRPD1P62314 119 aaKnown RBP13.2□□□□□ -0.3
HLCS-201ENST00000336648 MFSD10Q14728 455 aa13.2□□□□□ -0.3
HLCS-201ENST00000336648 PPP1R15BQ5SWA1 713 aa13.2□□□□□ -0.3
HLCS-201ENST00000336648 OTOP1Q7RTM1 612 aa13.2□□□□□ -0.3
HLCS-201ENST00000336648 COMMD3-BMI1R4GMX3 469 aa13.2□□□□□ -0.3
HLCS-201ENST00000336648 NRXN1Q9ULB1 1477 aa13.2□□□□□ -0.3
HLCS-201ENST00000336648 RGSL1A5PLK6 1076 aa13.2□□□□□ -0.3
HLCS-201ENST00000336648 PRLP01236 227 aa13.2□□□□□ -0.3
HLCS-201ENST00000336648 CYP1A2P05177 515 aa13.2□□□□□ -0.3
HLCS-201ENST00000336648 RPS6KA3P51812 740 aa13.2□□□□□ -0.3
HLCS-201ENST00000336648 TGFB2P61812 414 aa13.2□□□□□ -0.3
HLCS-201ENST00000336648 SLC2A14Q8TDB8 520 aa13.2□□□□□ -0.3
HLCS-201ENST00000336648 SLC35C2Q9NQQ7 365 aa13.2□□□□□ -0.3
HLCS-201ENST00000336648 PRPF19Q9UMS4 504 aaKnown RBP13.2□□□□□ -0.3
HLCS-201ENST00000336648 SLC9A8Q9Y2E8 581 aa13.2□□□□□ -0.3
HLCS-201ENST00000336648 MADDQ8WXG6 1647 aa13.2□□□□□ -0.3
HLCS-201ENST00000336648 SLITRK3O94933 977 aa13.2□□□□□ -0.3
HLCS-201ENST00000336648 FTH1P02794 183 aa13.2□□□□□ -0.3
HLCS-201ENST00000336648 OGNP20774 298 aaKnown RBP13.2□□□□□ -0.3
HLCS-201ENST00000336648 ADRA1DP25100 572 aa13.2□□□□□ -0.3
HLCS-201ENST00000336648 RNF19BQ6ZMZ0 732 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms