RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 ELMO2Q96JJ3 720 aa16.74■□□□□ 0.27
CDC42EP4-201ENST00000335793 NPAS2Q99743 824 aa16.74■□□□□ 0.27
CDC42EP4-201ENST00000335793 XPR1Q9UBH6 696 aa16.74■□□□□ 0.27
CDC42EP4-201ENST00000335793 BCAP29Q9UHQ4 241 aa16.74■□□□□ 0.27
CDC42EP4-201ENST00000335793 GJD2Q9UKL4 321 aa16.74■□□□□ 0.27
CDC42EP4-201ENST00000335793 ACOT9Q9Y305 439 aa16.74■□□□□ 0.27
CDC42EP4-201ENST00000335793 USP3Q9Y6I4 520 aa16.74■□□□□ 0.27
CDC42EP4-201ENST00000335793 G3V2L1 256 aa16.73■□□□□ 0.27
CDC42EP4-201ENST00000335793 DAB1O75553 588 aa16.73■□□□□ 0.27
CDC42EP4-201ENST00000335793 DDHD2O94830 711 aa16.73■□□□□ 0.27
CDC42EP4-201ENST00000335793 CLPTM1O96005 669 aa16.73■□□□□ 0.27
CDC42EP4-201ENST00000335793 MT-CYBP00156 380 aaPredicted RBP16.73■□□□□ 0.27
CDC42EP4-201ENST00000335793 PORP16435 677 aaPredicted RBP16.73■□□□□ 0.27
CDC42EP4-201ENST00000335793 XRCC1P18887 633 aaPredicted RBP16.73■□□□□ 0.27
CDC42EP4-201ENST00000335793 CHN2P52757 468 aa16.73■□□□□ 0.27
CDC42EP4-201ENST00000335793 PLK1P53350 603 aa16.73■□□□□ 0.27
CDC42EP4-201ENST00000335793 SULT2A1Q06520 285 aa16.73■□□□□ 0.27
CDC42EP4-201ENST00000335793 ZBTB17Q13105 803 aa16.73■□□□□ 0.27
CDC42EP4-201ENST00000335793 GEN1Q17RS7 908 aa16.73■□□□□ 0.27
CDC42EP4-201ENST00000335793 NADK2Q4G0N4 442 aa16.73■□□□□ 0.27
CDC42EP4-201ENST00000335793 PRAMEF19Q5SWL8 479 aa16.73■□□□□ 0.27
CDC42EP4-201ENST00000335793 C11orf84Q9BUA3 381 aaPredicted RBP16.73■□□□□ 0.27
CDC42EP4-201ENST00000335793 ZDHHC2Q9UIJ5 367 aa16.73■□□□□ 0.27
CDC42EP4-201ENST00000335793 ADAM28Q9UKQ2 775 aa16.73■□□□□ 0.27
CDC42EP4-201ENST00000335793 RAP2CQ9Y3L5 183 aa16.73■□□□□ 0.27
CDC42EP4-201ENST00000335793 POLR2AP24928 1970 aaKnown RBP16.73■□□□□ 0.27
CDC42EP4-201ENST00000335793 A0A1W2PQ67 120 aa16.73■□□□□ 0.27
CDC42EP4-201ENST00000335793 TMEM233B4DJY2 109 aa16.73■□□□□ 0.27
CDC42EP4-201ENST00000335793 HNRNPLP14866 589 aaKnown RBP eCLIP16.73■□□□□ 0.27
CDC42EP4-201ENST00000335793 PNPLA4P41247 253 aa16.73■□□□□ 0.27
CDC42EP4-201ENST00000335793 EIF2B2P49770 351 aaKnown RBP16.73■□□□□ 0.27
CDC42EP4-201ENST00000335793 ITKQ08881 620 aa16.73■□□□□ 0.27
CDC42EP4-201ENST00000335793 PCSK7Q16549 785 aa16.73■□□□□ 0.27
CDC42EP4-201ENST00000335793 MARCH8Q5T0T0 291 aa16.73■□□□□ 0.27
CDC42EP4-201ENST00000335793 NAPEPLDQ6IQ20 393 aa16.73■□□□□ 0.27
CDC42EP4-201ENST00000335793 PGM2L1Q6PCE3 622 aa16.73■□□□□ 0.27
CDC42EP4-201ENST00000335793 ZFP28Q8NHY6 868 aa16.73■□□□□ 0.27
CDC42EP4-201ENST00000335793 DQX1Q8TE96 717 aaKnown RBP16.73■□□□□ 0.27
CDC42EP4-201ENST00000335793 PPWD1Q96BP3 646 aaKnown RBP16.73■□□□□ 0.27
CDC42EP4-201ENST00000335793 CEP295NLQ96MC4 621 aa16.73■□□□□ 0.27
CDC42EP4-201ENST00000335793 NPY6RQ99463 290 aa16.73■□□□□ 0.27
CDC42EP4-201ENST00000335793 SGIP1Q9BQI5 828 aa16.73■□□□□ 0.27
CDC42EP4-201ENST00000335793 WDR41Q9HAD4 459 aa16.73■□□□□ 0.27
CDC42EP4-201ENST00000335793 CLEC11AQ9Y240 323 aa16.73■□□□□ 0.27
CDC42EP4-201ENST00000335793 C15orf38-AP3S2A0A0A6YYH1 394 aa16.72■□□□□ 0.27
CDC42EP4-201ENST00000335793 EMP3P54852 163 aa16.72■□□□□ 0.27
CDC42EP4-201ENST00000335793 CDH17Q12864 832 aa16.72■□□□□ 0.27
CDC42EP4-201ENST00000335793 ATP1A4Q13733 1029 aa16.72■□□□□ 0.27
CDC42EP4-201ENST00000335793 ARPINQ7Z6K5 226 aa16.72■□□□□ 0.27
CDC42EP4-201ENST00000335793 SPNS2Q8IVW8 549 aa16.72■□□□□ 0.27
CDC42EP4-201ENST00000335793 FSTL5Q8N475 847 aaPredicted RBP16.72■□□□□ 0.27
CDC42EP4-201ENST00000335793 NPWQ8N729 165 aa16.72■□□□□ 0.27
CDC42EP4-201ENST00000335793 SLC10A4Q96EP9 437 aa16.72■□□□□ 0.27
CDC42EP4-201ENST00000335793 DCUN1D1Q96GG9 259 aa16.72■□□□□ 0.27
CDC42EP4-201ENST00000335793 EFCAB1Q9HAE3 211 aa16.72■□□□□ 0.27
CDC42EP4-201ENST00000335793 PCDHGB4Q9UN71 923 aa16.72■□□□□ 0.27
CDC42EP4-201ENST00000335793 PCDHGB5Q9Y5G0 923 aa16.72■□□□□ 0.27
CDC42EP4-201ENST00000335793 SSC5DA1L4H1 1573 aa16.72■□□□□ 0.27
CDC42EP4-201ENST00000335793 ZCWPW2A0A1B0GU75 182 aa16.72■□□□□ 0.27
CDC42EP4-201ENST00000335793 ZNF195O14628 629 aa16.72■□□□□ 0.27
CDC42EP4-201ENST00000335793 MOCS2O96007 188 aaPredicted RBP16.72■□□□□ 0.27
CDC42EP4-201ENST00000335793 MPP1Q00013 466 aa16.72■□□□□ 0.27
CDC42EP4-201ENST00000335793 PRKAA1Q13131 559 aa16.72■□□□□ 0.27
CDC42EP4-201ENST00000335793 MSLNQ13421 630 aaPredicted RBP16.72■□□□□ 0.27
CDC42EP4-201ENST00000335793 LIPMQ5VYY2 423 aa16.72■□□□□ 0.27
CDC42EP4-201ENST00000335793 SNX31Q8N9S9 440 aa16.72■□□□□ 0.27
CDC42EP4-201ENST00000335793 HEPHQ9BQS7 1158 aa16.72■□□□□ 0.27
CDC42EP4-201ENST00000335793 FSD1LQ9BXM9 530 aa16.72■□□□□ 0.27
CDC42EP4-201ENST00000335793 MRPL1Q9BYD6 325 aaKnown RBP16.72■□□□□ 0.27
CDC42EP4-201ENST00000335793 IL22Q9GZX6 179 aa16.72■□□□□ 0.27
CDC42EP4-201ENST00000335793 SEMA6AQ9H2E6 1030 aa16.72■□□□□ 0.27
CDC42EP4-201ENST00000335793 OXSMQ9NWU1 459 aa16.72■□□□□ 0.27
CDC42EP4-201ENST00000335793 PSMD13Q9UNM6 376 aa16.72■□□□□ 0.27
CDC42EP4-201ENST00000335793 DERAQ9Y315 318 aa16.72■□□□□ 0.27
CDC42EP4-201ENST00000335793 MGAMO43451 1857 aa16.72■□□□□ 0.27
CDC42EP4-201ENST00000335793 SF3B1O75533 1304 aaKnown RBP eCLIP16.72■□□□□ 0.27
CDC42EP4-201ENST00000335793 H3BSA7 217 aa16.72■□□□□ 0.27
CDC42EP4-201ENST00000335793 SMPD1P17405 629 aa16.72■□□□□ 0.27
CDC42EP4-201ENST00000335793 IGFBP6P24592 240 aaPredicted RBP16.72■□□□□ 0.27
CDC42EP4-201ENST00000335793 CLEC20AQ6ZU45 233 aa16.72■□□□□ 0.27
CDC42EP4-201ENST00000335793 EME1Q96AY2 570 aa16.72■□□□□ 0.27
CDC42EP4-201ENST00000335793 NXNL1Q96CM4 212 aa16.72■□□□□ 0.27
CDC42EP4-201ENST00000335793 PRPF18Q99633 342 aaKnown RBP16.72■□□□□ 0.27
CDC42EP4-201ENST00000335793 FTHL17Q9BXU8 183 aa16.72■□□□□ 0.27
CDC42EP4-201ENST00000335793 FAM124BQ9H5Z6 455 aaPredicted RBP16.72■□□□□ 0.27
CDC42EP4-201ENST00000335793 VTA1Q9NP79 307 aa16.72■□□□□ 0.27
CDC42EP4-201ENST00000335793 PTTG2Q9NZH5 202 aa16.72■□□□□ 0.27
CDC42EP4-201ENST00000335793 NRF1Q16656 503 aa16.71■□□□□ 0.27
CDC42EP4-201ENST00000335793 TMEM135Q86UB9 458 aa16.71■□□□□ 0.27
CDC42EP4-201ENST00000335793 EXT2Q93063 718 aa16.71■□□□□ 0.27
CDC42EP4-201ENST00000335793 EPS15L1Q9UBC2 864 aa16.71■□□□□ 0.27
CDC42EP4-201ENST00000335793 STK39Q9UEW8 545 aa16.71■□□□□ 0.27
CDC42EP4-201ENST00000335793 NEMP2A6NFY4 417 aa16.71■□□□□ 0.27
CDC42EP4-201ENST00000335793 TMEM114B3SHH9 223 aa16.71■□□□□ 0.27
CDC42EP4-201ENST00000335793 PIRO00625 290 aa16.71■□□□□ 0.27
CDC42EP4-201ENST00000335793 STMN1P16949 149 aa16.71■□□□□ 0.27
CDC42EP4-201ENST00000335793 ME2P23368 584 aa16.71■□□□□ 0.27
CDC42EP4-201ENST00000335793 NPY2RP49146 381 aa16.71■□□□□ 0.27
CDC42EP4-201ENST00000335793 CSHL1Q14406 222 aa16.71■□□□□ 0.27
CDC42EP4-201ENST00000335793 PAFAH1B3Q15102 231 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms