RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 SPATA24Q86W54 205 aa12.48□□□□□ -0.41
VPS33B-201ENST00000333371 RNF135Q8IUD6 432 aa12.48□□□□□ -0.41
VPS33B-201ENST00000333371 SMG8Q8ND04 991 aaKnown RBP12.48□□□□□ -0.41
VPS33B-201ENST00000333371 PCED1BQ96HM7 432 aa12.48□□□□□ -0.41
VPS33B-201ENST00000333371 TEKT5Q96M29 485 aa12.48□□□□□ -0.41
VPS33B-201ENST00000333371 LRGUKQ96M69 825 aa12.48□□□□□ -0.41
VPS33B-201ENST00000333371 COLEC11Q9BWP8 271 aa12.48□□□□□ -0.41
VPS33B-201ENST00000333371 IL22Q9GZX6 179 aa12.48□□□□□ -0.41
VPS33B-201ENST00000333371 ETAA1Q9NY74 926 aa12.48□□□□□ -0.41
VPS33B-201ENST00000333371 CDYLQ9Y232 598 aa12.48□□□□□ -0.41
VPS33B-201ENST00000333371 MBLAC1A4D2B0 266 aaPredicted RBP12.48□□□□□ -0.41
VPS33B-201ENST00000333371 KCNU1A8MYU2 1149 aa12.48□□□□□ -0.41
VPS33B-201ENST00000333371 PTGESO14684 152 aa12.48□□□□□ -0.41
VPS33B-201ENST00000333371 TREHO43280 583 aa12.48□□□□□ -0.41
VPS33B-201ENST00000333371 TFAP2AP05549 437 aa12.48□□□□□ -0.41
VPS33B-201ENST00000333371 ZNF865P0CJ78 1059 aaPredicted RBP12.48□□□□□ -0.41
VPS33B-201ENST00000333371 CHRNA4P43681 627 aa12.48□□□□□ -0.41
VPS33B-201ENST00000333371 PLK1P53350 603 aa12.48□□□□□ -0.41
VPS33B-201ENST00000333371 CSE1LP55060 971 aaKnown RBP12.48□□□□□ -0.41
VPS33B-201ENST00000333371 ADGRE1Q14246 886 aa12.48□□□□□ -0.41
VPS33B-201ENST00000333371 SNX17Q15036 470 aa12.48□□□□□ -0.41
VPS33B-201ENST00000333371 C16orf89Q6UX73 402 aa12.48□□□□□ -0.41
VPS33B-201ENST00000333371 LIMS2Q7Z4I7 341 aa12.48□□□□□ -0.41
VPS33B-201ENST00000333371 TXNDC5Q8NBS9 432 aaKnown RBP12.48□□□□□ -0.41
VPS33B-201ENST00000333371 STYXQ8WUJ0 223 aa12.48□□□□□ -0.41
VPS33B-201ENST00000333371 SREK1Q8WXA9 508 aaKnown RBP12.48□□□□□ -0.41
VPS33B-201ENST00000333371 NCSTNQ92542 709 aa12.48□□□□□ -0.41
VPS33B-201ENST00000333371 CNDP1Q96KN2 507 aa12.48□□□□□ -0.41
VPS33B-201ENST00000333371 NDNQ99608 321 aa12.48□□□□□ -0.41
VPS33B-201ENST00000333371 GRIP2Q9C0E4 1043 aa12.48□□□□□ -0.41
VPS33B-201ENST00000333371 PCDHAC1Q9H158 963 aa12.48□□□□□ -0.41
VPS33B-201ENST00000333371 SEMA6AQ9H2E6 1030 aa12.48□□□□□ -0.41
VPS33B-201ENST00000333371 RHOJQ9H4E5 214 aa12.48□□□□□ -0.41
VPS33B-201ENST00000333371 ZNF385DQ9H6B1 395 aa12.48□□□□□ -0.41
VPS33B-201ENST00000333371 MTF2Q9Y483 593 aaPredicted RBP12.48□□□□□ -0.41
VPS33B-201ENST00000333371 TCAF2A6NFQ2 919 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 TARM1B6A8C7 271 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 NELFEP18615 380 aaKnown RBP12.47□□□□□ -0.41
VPS33B-201ENST00000333371 WARSP23381 471 aaKnown RBP12.47□□□□□ -0.41
VPS33B-201ENST00000333371 ARNTP27540 789 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 AXLP30530 894 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 CSRP3P50461 194 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 MYBPC1Q00872 1141 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 GALNT2Q10471 571 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 CDH17Q12864 832 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 ART3Q13508 389 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 SH2D4BQ5SQS7 431 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 MAP3K21Q5TCX8 1036 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 CST9Q5W186 159 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 CNSTQ6PJW8 725 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 KDM1BQ8NB78 822 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 RP9Q8TA86 221 aaKnown RBP12.47□□□□□ -0.41
VPS33B-201ENST00000333371 PIP4K2CQ8TBX8 421 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 HDAC11Q96DB2 347 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 WDCPQ9H6R7 721 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 ZBTB26Q9HCK0 441 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 GTSE1Q9NYZ3 720 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 LZTS1Q9Y250 596 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 C17orf102A2RUQ5 167 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 CCDC160A6NGH7 325 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 MANSC4A6NHS7 340 aaPredicted RBP12.47□□□□□ -0.41
VPS33B-201ENST00000333371 PEX1O43933 1283 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 DDHD2O94830 711 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 CSPG5O95196 566 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 PIM1P11309 404 aaPredicted RBP12.47□□□□□ -0.41
VPS33B-201ENST00000333371 KCNA5P22460 613 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 FGFR3P22607 806 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 RGS2P41220 211 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 NPY2RP49146 381 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 XIAPP98170 497 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 PRKAA1Q13131 559 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 NRF1Q16656 503 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 PPP1R3AQ16821 1122 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 SLC5A9Q2M3M2 681 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.47□□□□□ -0.41
VPS33B-201ENST00000333371 ZNF789Q5FWF6 425 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 RBM44Q6ZP01 1051 aaKnown RBP12.47□□□□□ -0.41
VPS33B-201ENST00000333371 ARHGAP18Q8N392 663 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 KCTD13Q8WZ19 329 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 ATP6V1E2Q96A05 226 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 GPR78Q96P69 363 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 BTBD9Q96Q07 612 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 SERPINI1Q99574 410 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 PAAF1Q9BRP4 392 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 KATNAL1Q9BW62 490 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 OSBPL2Q9H1P3 480 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 NDFIP2Q9NV92 336 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 ADA2Q9NZK5 511 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 C6orf203Q9P0P8 240 aaPredicted RBP12.47□□□□□ -0.41
VPS33B-201ENST00000333371 GMPR2Q9P2T1 348 aaKnown RBP12.47□□□□□ -0.41
VPS33B-201ENST00000333371 PRPF19Q9UMS4 504 aaKnown RBP12.47□□□□□ -0.41
VPS33B-201ENST00000333371 MIA3Q5JRA6 1907 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 FAM95CA0A1B0GW59 222 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 XPOTO43592 962 aaKnown RBP12.47□□□□□ -0.41
VPS33B-201ENST00000333371 PMPCBO75439 489 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 RNASEH2AO75792 299 aaKnown RBP12.47□□□□□ -0.41
VPS33B-201ENST00000333371 CABYRO75952 493 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 TSPAN8P19075 237 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 TAS2R39P59534 338 aa12.47□□□□□ -0.41
VPS33B-201ENST00000333371 RALGDSQ12967 914 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms