RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 SLC24A2Q9UI40 661 aa19.07■□□□□ 0.64
EXOSC3-201ENST00000327304 VPS28Q9UK41 221 aa19.07■□□□□ 0.64
EXOSC3-201ENST00000327304 SNAP91O60641 907 aa19.07■□□□□ 0.64
EXOSC3-201ENST00000327304 PRAMEF11O60813 436 aa19.07■□□□□ 0.64
EXOSC3-201ENST00000327304 PEX11BO96011 259 aa19.07■□□□□ 0.64
EXOSC3-201ENST00000327304 MLNP12872 115 aa19.07■□□□□ 0.64
EXOSC3-201ENST00000327304 ELK3P41970 407 aa19.07■□□□□ 0.64
EXOSC3-201ENST00000327304 MAGEA3P43357 314 aa19.07■□□□□ 0.64
EXOSC3-201ENST00000327304 MMP13P45452 471 aa19.07■□□□□ 0.64
EXOSC3-201ENST00000327304 OXCT1P55809 520 aa19.07■□□□□ 0.64
EXOSC3-201ENST00000327304 GNGT1P63211 74 aa19.07■□□□□ 0.64
EXOSC3-201ENST00000327304 ZBTB17Q13105 803 aa19.07■□□□□ 0.64
EXOSC3-201ENST00000327304 C3orf62Q6ZUJ4 267 aa19.07■□□□□ 0.64
EXOSC3-201ENST00000327304 CAND1Q86VP6 1230 aaKnown RBP19.07■□□□□ 0.64
EXOSC3-201ENST00000327304 PLCD3Q8N3E9 789 aa19.07■□□□□ 0.64
EXOSC3-201ENST00000327304 KCNK12Q9HB15 430 aa19.07■□□□□ 0.64
EXOSC3-201ENST00000327304 XAB2Q9HCS7 855 aaKnown RBP19.07■□□□□ 0.64
EXOSC3-201ENST00000327304 TRHDEQ9UKU6 1024 aa19.07■□□□□ 0.64
EXOSC3-201ENST00000327304 INTS6Q9UL03 887 aaKnown RBP19.07■□□□□ 0.64
EXOSC3-201ENST00000327304 KDELR3O43731 214 aa19.06■□□□□ 0.64
EXOSC3-201ENST00000327304 PTPN3P26045 913 aa19.06■□□□□ 0.64
EXOSC3-201ENST00000327304 ETFBP38117 255 aa19.06■□□□□ 0.64
EXOSC3-201ENST00000327304 ETFBKMTQ8IXQ9 262 aa19.06■□□□□ 0.64
EXOSC3-201ENST00000327304 ZNF567Q8N184 647 aa19.06■□□□□ 0.64
EXOSC3-201ENST00000327304 ZNF419Q96HQ0 510 aaPredicted RBP19.06■□□□□ 0.64
EXOSC3-201ENST00000327304 BRD9Q9H8M2 597 aa19.06■□□□□ 0.64
EXOSC3-201ENST00000327304 PDFQ9HBH1 243 aa19.06■□□□□ 0.64
EXOSC3-201ENST00000327304 RABGEF1Q9UJ41 708 aa19.06■□□□□ 0.64
EXOSC3-201ENST00000327304 GGA2Q9UJY4 613 aa19.06■□□□□ 0.64
EXOSC3-201ENST00000327304 FBXO10Q9UK96 956 aa19.06■□□□□ 0.64
EXOSC3-201ENST00000327304 ACTL7AQ9Y615 435 aa19.06■□□□□ 0.64
EXOSC3-201ENST00000327304 SRRM3A6NNA2 597 aaPredicted RBP19.05■□□□□ 0.64
EXOSC3-201ENST00000327304 CBX4O00257 560 aa19.05■□□□□ 0.64
EXOSC3-201ENST00000327304 MATN3O15232 486 aa19.05■□□□□ 0.64
EXOSC3-201ENST00000327304 ZMPSTE24O75844 475 aa19.05■□□□□ 0.64
EXOSC3-201ENST00000327304 ASGR2P07307 311 aa19.05■□□□□ 0.64
EXOSC3-201ENST00000327304 SSTR1P30872 391 aa19.05■□□□□ 0.64
EXOSC3-201ENST00000327304 SLC6A11P48066 632 aa19.05■□□□□ 0.64
EXOSC3-201ENST00000327304 IL10RBQ08334 325 aa19.05■□□□□ 0.64
EXOSC3-201ENST00000327304 NR1H3Q13133 447 aa19.05■□□□□ 0.64
EXOSC3-201ENST00000327304 KLHL38Q2WGJ6 581 aa19.05■□□□□ 0.64
EXOSC3-201ENST00000327304 PLEKHG6Q3KR16 790 aa19.05■□□□□ 0.64
EXOSC3-201ENST00000327304 PUS10Q3MIT2 529 aaKnown RBP19.05■□□□□ 0.64
EXOSC3-201ENST00000327304 FUT11Q495W5 492 aa19.05■□□□□ 0.64
EXOSC3-201ENST00000327304 NAIF1Q69YI7 327 aaPredicted RBP19.05■□□□□ 0.64
EXOSC3-201ENST00000327304 TIGD7Q6NT04 549 aaPredicted RBP19.05■□□□□ 0.64
EXOSC3-201ENST00000327304 EXOC3L1Q86VI1 746 aa19.05■□□□□ 0.64
EXOSC3-201ENST00000327304 USP33Q8TEY7 942 aa19.05■□□□□ 0.64
EXOSC3-201ENST00000327304 XPO6Q96QU8 1125 aaKnown RBP19.05■□□□□ 0.64
EXOSC3-201ENST00000327304 SLC2A11Q9BYW1 496 aa19.05■□□□□ 0.64
EXOSC3-201ENST00000327304 ACSS3Q9H6R3 686 aa19.05■□□□□ 0.64
EXOSC3-201ENST00000327304 CHMP2BQ9UQN3 213 aa19.05■□□□□ 0.64
EXOSC3-201ENST00000327304 ACTL7BQ9Y614 415 aa19.05■□□□□ 0.64
EXOSC3-201ENST00000327304 TULP3O75386 442 aa19.04■□□□□ 0.64
EXOSC3-201ENST00000327304 JCHAINP01591 159 aa19.04■□□□□ 0.64
EXOSC3-201ENST00000327304 GSTA2P09210 222 aa19.04■□□□□ 0.64
EXOSC3-201ENST00000327304 CISD3P0C7P0 127 aa19.04■□□□□ 0.64
EXOSC3-201ENST00000327304 PABPC1P11940 636 aaKnown RBP19.04■□□□□ 0.64
EXOSC3-201ENST00000327304 CCNB1P14635 433 aa19.04■□□□□ 0.64
EXOSC3-201ENST00000327304 GCAP28676 217 aa19.04■□□□□ 0.64
EXOSC3-201ENST00000327304 MESP2Q0VG99 397 aa19.04■□□□□ 0.64
EXOSC3-201ENST00000327304 GLIPR1L2Q4G1C9 344 aa19.04■□□□□ 0.64
EXOSC3-201ENST00000327304 PITRM1Q5JRX3 1037 aa19.04■□□□□ 0.64
EXOSC3-201ENST00000327304 SYCP2LQ5T4T6 812 aa19.04■□□□□ 0.64
EXOSC3-201ENST00000327304 ZNF534Q76KX8 674 aa19.04■□□□□ 0.64
EXOSC3-201ENST00000327304 ZNF771Q7L3S4 317 aaPredicted RBP19.04■□□□□ 0.64
EXOSC3-201ENST00000327304 PID1Q7Z2X4 250 aa19.04■□□□□ 0.64
EXOSC3-201ENST00000327304 ZNF557Q8N988 423 aaPredicted RBP19.04■□□□□ 0.64
EXOSC3-201ENST00000327304 DCAF4L2Q8NA75 395 aa19.04■□□□□ 0.64
EXOSC3-201ENST00000327304 MAML1Q92585 1016 aa19.04■□□□□ 0.64
EXOSC3-201ENST00000327304 VPS51Q9UID3 782 aa19.04■□□□□ 0.64
EXOSC3-201ENST00000327304 FAM50BQ9Y247 325 aa19.04■□□□□ 0.64
EXOSC3-201ENST00000327304 GJA4P35212 333 aa19.04■□□□□ 0.64
EXOSC3-201ENST00000327304 DGKGP49619 791 aa19.04■□□□□ 0.64
EXOSC3-201ENST00000327304 PLK1P53350 603 aa19.04■□□□□ 0.64
EXOSC3-201ENST00000327304 GEMIN4P57678 1058 aaKnown RBP19.04■□□□□ 0.64
EXOSC3-201ENST00000327304 ARF5P84085 180 aa19.04■□□□□ 0.64
EXOSC3-201ENST00000327304 GUCY1A3Q02108 690 aa19.04■□□□□ 0.64
EXOSC3-201ENST00000327304 DMTNQ08495 405 aa19.04■□□□□ 0.64
EXOSC3-201ENST00000327304 SLC12A1Q13621 1099 aa19.04■□□□□ 0.64
EXOSC3-201ENST00000327304 ITPRIPL2Q3MIP1 535 aa19.04■□□□□ 0.64
EXOSC3-201ENST00000327304 LINGO4Q6UY18 593 aa19.04■□□□□ 0.64
EXOSC3-201ENST00000327304 SLC44A3Q8N4M1 653 aa19.04■□□□□ 0.64
EXOSC3-201ENST00000327304 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.04■□□□□ 0.64
EXOSC3-201ENST00000327304 FATE1Q969F0 183 aa19.04■□□□□ 0.64
EXOSC3-201ENST00000327304 CENPTQ96BT3 561 aa19.04■□□□□ 0.64
EXOSC3-201ENST00000327304 CHFRQ96EP1 664 aa19.04■□□□□ 0.64
EXOSC3-201ENST00000327304 KLHL8Q9P2G9 620 aaPredicted RBP19.04■□□□□ 0.64
EXOSC3-201ENST00000327304 CTNNAL1Q9UBT7 734 aa19.04■□□□□ 0.64
EXOSC3-201ENST00000327304 TICRRQ7Z2Z1 1910 aa19.03■□□□□ 0.64
EXOSC3-201ENST00000327304 AVILO75366 819 aa19.03■□□□□ 0.64
EXOSC3-201ENST00000327304 SLC10A7Q0GE19 358 aa19.03■□□□□ 0.64
EXOSC3-201ENST00000327304 GEN1Q17RS7 908 aa19.03■□□□□ 0.64
EXOSC3-201ENST00000327304 TEX44Q53QW1 395 aa19.03■□□□□ 0.64
EXOSC3-201ENST00000327304 ITPRIPL1Q6GPH6 555 aa19.03■□□□□ 0.64
EXOSC3-201ENST00000327304 LRRC8BQ6P9F7 803 aa19.03■□□□□ 0.64
EXOSC3-201ENST00000327304 CAPN12Q6ZSI9 719 aa19.03■□□□□ 0.64
EXOSC3-201ENST00000327304 KIAA0907Q7Z7F0 614 aaPredicted RBP19.03■□□□□ 0.64
EXOSC3-201ENST00000327304 IGDCC3Q8IVU1 814 aa19.03■□□□□ 0.64
EXOSC3-201ENST00000327304 AGGF1Q8N302 714 aaeCLIP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms