RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 OSTM1Q86WC4 334 aa19.34■□□□□ 0.69
RTN4-201ENST00000317610 CARM1Q86X55 608 aa19.34■□□□□ 0.69
RTN4-201ENST00000317610 LZICQ8WZA0 190 aa19.34■□□□□ 0.69
RTN4-201ENST00000317610 UHRF1Q96T88 793 aaPredicted RBP19.34■□□□□ 0.69
RTN4-201ENST00000317610 HAUS8Q9BT25 410 aa19.34■□□□□ 0.69
RTN4-201ENST00000317610 OSBPL11Q9BXB4 747 aa19.34■□□□□ 0.69
RTN4-201ENST00000317610 UNC93B1Q9H1C4 597 aa19.34■□□□□ 0.69
RTN4-201ENST00000317610 DDX18Q9NVP1 670 aaKnown RBP19.34■□□□□ 0.69
RTN4-201ENST00000317610 AP4S1Q9Y587 144 aa19.34■□□□□ 0.69
RTN4-201ENST00000317610 GMEB1Q9Y692 573 aa19.34■□□□□ 0.69
RTN4-201ENST00000317610 SHROOM3Q8TF72 1996 aa19.34■□□□□ 0.69
RTN4-201ENST00000317610 TRIM24O15164 1050 aa19.34■□□□□ 0.69
RTN4-201ENST00000317610 PSMD3O43242 534 aa19.34■□□□□ 0.69
RTN4-201ENST00000317610 HNRNPRO43390 633 aaKnown RBP19.34■□□□□ 0.69
RTN4-201ENST00000317610 CACNG3O60359 315 aa19.34■□□□□ 0.69
RTN4-201ENST00000317610 SAT1P21673 171 aa19.34■□□□□ 0.69
RTN4-201ENST00000317610 WARSP23381 471 aaKnown RBP19.34■□□□□ 0.69
RTN4-201ENST00000317610 PCSK6P29122 969 aa19.34■□□□□ 0.69
RTN4-201ENST00000317610 ALDH3B2P48448 385 aa19.34■□□□□ 0.69
RTN4-201ENST00000317610 GJA9P57773 515 aa19.34■□□□□ 0.69
RTN4-201ENST00000317610 RHDQ02161 417 aa19.34■□□□□ 0.69
RTN4-201ENST00000317610 TRAP1Q12931 704 aaKnown RBP19.34■□□□□ 0.69
RTN4-201ENST00000317610 GRIK4Q16099 956 aa19.34■□□□□ 0.69
RTN4-201ENST00000317610 PAQR9Q6ZVX9 377 aa19.34■□□□□ 0.69
RTN4-201ENST00000317610 ARMCX2Q7L311 632 aa19.34■□□□□ 0.69
RTN4-201ENST00000317610 PIWIL4Q7Z3Z4 852 aaKnown RBP19.34■□□□□ 0.69
RTN4-201ENST00000317610 FAM156AQ8NDB6 213 aa19.34■□□□□ 0.69
RTN4-201ENST00000317610 EMID1Q96A84 441 aaPredicted RBP19.34■□□□□ 0.69
RTN4-201ENST00000317610 EME1Q96AY2 570 aa19.34■□□□□ 0.69
RTN4-201ENST00000317610 SUDS3Q9H7L9 328 aaPredicted RBP19.34■□□□□ 0.69
RTN4-201ENST00000317610 GALNT8Q9NY28 637 aa19.34■□□□□ 0.69
RTN4-201ENST00000317610 FBXW11Q9UKB1 542 aa19.34■□□□□ 0.69
RTN4-201ENST00000317610 CSADQ9Y600 493 aa19.34■□□□□ 0.69
RTN4-201ENST00000317610 TANC1Q9C0D5 1861 aa19.33■□□□□ 0.69
RTN4-201ENST00000317610 KCNU1A8MYU2 1149 aa19.33■□□□□ 0.69
RTN4-201ENST00000317610 TMEM233B4DJY2 109 aa19.33■□□□□ 0.69
RTN4-201ENST00000317610 TAF6P49848 677 aa19.33■□□□□ 0.69
RTN4-201ENST00000317610 LRP8Q14114 963 aa19.33■□□□□ 0.69
RTN4-201ENST00000317610 IKBKEQ14164 716 aa19.33■□□□□ 0.69
RTN4-201ENST00000317610 GK5Q6ZS86 529 aa19.33■□□□□ 0.69
RTN4-201ENST00000317610 LINC00523Q86TU6 105 aa19.33■□□□□ 0.69
RTN4-201ENST00000317610 MFSD6LQ8IWD5 586 aa19.33■□□□□ 0.69
RTN4-201ENST00000317610 SIX6OS1Q8N1H7 587 aa19.33■□□□□ 0.69
RTN4-201ENST00000317610 HMGCLL1Q8TB92 370 aa19.33■□□□□ 0.69
RTN4-201ENST00000317610 NXNL1Q96CM4 212 aa19.33■□□□□ 0.69
RTN4-201ENST00000317610 MRPL46Q9H2W6 279 aaKnown RBP19.33■□□□□ 0.69
RTN4-201ENST00000317610 NXF3Q9H4D5 531 aaKnown RBP19.33■□□□□ 0.69
RTN4-201ENST00000317610 MROH8Q9H579 483 aa19.33■□□□□ 0.69
RTN4-201ENST00000317610 COQ10BQ9H8M1 238 aa19.33■□□□□ 0.69
RTN4-201ENST00000317610 RNF19AQ9NV58 838 aa19.33■□□□□ 0.69
RTN4-201ENST00000317610 ADA2Q9NZK5 511 aa19.33■□□□□ 0.69
RTN4-201ENST00000317610 SRCAPQ6ZRS2 3230 aa19.33■□□□□ 0.68
RTN4-201ENST00000317610 H3BSA7 217 aa19.33■□□□□ 0.68
RTN4-201ENST00000317610 TRMUO75648 421 aaKnown RBP19.33■□□□□ 0.68
RTN4-201ENST00000317610 FAM200BP0CF97 657 aa19.33■□□□□ 0.68
RTN4-201ENST00000317610 TCN1P20061 433 aaPredicted RBP19.33■□□□□ 0.68
RTN4-201ENST00000317610 PRPSAP1Q14558 356 aa19.33■□□□□ 0.68
RTN4-201ENST00000317610 MYBPC3Q14896 1274 aa19.33■□□□□ 0.68
RTN4-201ENST00000317610 MAPRE2Q15555 327 aa19.33■□□□□ 0.68
RTN4-201ENST00000317610 PKN3Q6P5Z2 889 aa19.33■□□□□ 0.68
RTN4-201ENST00000317610 NOTUMQ6P988 496 aa19.33■□□□□ 0.68
RTN4-201ENST00000317610 CEP97Q8IW35 865 aa19.33■□□□□ 0.68
RTN4-201ENST00000317610 TSPAN14Q8NG11 270 aa19.33■□□□□ 0.68
RTN4-201ENST00000317610 GAB3Q8WWW8 586 aa19.33■□□□□ 0.68
RTN4-201ENST00000317610 PGAP3Q96FM1 320 aaPredicted RBP19.33■□□□□ 0.68
RTN4-201ENST00000317610 MRM3Q9HC36 420 aaKnown RBP19.33■□□□□ 0.68
RTN4-201ENST00000317610 IRAK4Q9NWZ3 460 aa19.33■□□□□ 0.68
RTN4-201ENST00000317610 NCKIPSDQ9NZQ3 722 aa19.33■□□□□ 0.68
RTN4-201ENST00000317610 HACD3Q9P035 362 aa19.33■□□□□ 0.68
RTN4-201ENST00000317610 AK5Q9Y6K8 562 aa19.33■□□□□ 0.68
RTN4-201ENST00000317610 SMIM28A0A1B0GU29 152 aa19.32■□□□□ 0.68
RTN4-201ENST00000317610 E7ENX8 843 aa19.32■□□□□ 0.68
RTN4-201ENST00000317610 H3BRB1 525 aa19.32■□□□□ 0.68
RTN4-201ENST00000317610 CLDN5O00501 218 aa19.32■□□□□ 0.68
RTN4-201ENST00000317610 NRP1O14786 923 aa19.32■□□□□ 0.68
RTN4-201ENST00000317610 STX5Q13190 355 aa19.32■□□□□ 0.68
RTN4-201ENST00000317610 SV2CQ496J9 727 aa19.32■□□□□ 0.68
RTN4-201ENST00000317610 PCID2Q5JVF3 399 aa19.32■□□□□ 0.68
RTN4-201ENST00000317610 IRAK1BP1Q5VVH5 260 aa19.32■□□□□ 0.68
RTN4-201ENST00000317610 CLEC20AQ6ZU45 233 aa19.32■□□□□ 0.68
RTN4-201ENST00000317610 CATSPER4Q7RTX7 472 aa19.32■□□□□ 0.68
RTN4-201ENST00000317610 NUP93Q8N1F7 819 aa19.32■□□□□ 0.68
RTN4-201ENST00000317610 CCNYL1Q8N7R7 359 aa19.32■□□□□ 0.68
RTN4-201ENST00000317610 TXNDC5Q8NBS9 432 aaKnown RBP19.32■□□□□ 0.68
RTN4-201ENST00000317610 MAML3Q96JK9 1138 aa19.32■□□□□ 0.68
RTN4-201ENST00000317610 MRPL57Q9BQC6 102 aaKnown RBP19.32■□□□□ 0.68
RTN4-201ENST00000317610 FTHL17Q9BXU8 183 aa19.32■□□□□ 0.68
RTN4-201ENST00000317610 TUT1Q9H6E5 874 aaKnown RBP19.32■□□□□ 0.68
RTN4-201ENST00000317610 GPRC5DQ9NZD1 345 aa19.32■□□□□ 0.68
RTN4-201ENST00000317610 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.32■□□□□ 0.68
RTN4-201ENST00000317610 IPO11Q9UI26 975 aaKnown RBP19.32■□□□□ 0.68
RTN4-201ENST00000317610 NRCAMQ92823 1304 aa19.32■□□□□ 0.68
RTN4-201ENST00000317610 A0A1B0GTW7 788 aa19.31■□□□□ 0.68
RTN4-201ENST00000317610 TCRBV3S1A0A5B6 114 aa19.31■□□□□ 0.68
RTN4-201ENST00000317610 TRPA1O75762 1119 aa19.31■□□□□ 0.68
RTN4-201ENST00000317610 H6PDO95479 791 aa19.31■□□□□ 0.68
RTN4-201ENST00000317610 STMN1P16949 149 aa19.31■□□□□ 0.68
RTN4-201ENST00000317610 ZNF135P52742 658 aaPredicted RBP19.31■□□□□ 0.68
RTN4-201ENST00000317610 SQLEQ14534 574 aa19.31■□□□□ 0.68
RTN4-201ENST00000317610 DGKDQ16760 1214 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms