RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 APOBEC3FQ8IUX4 373 aaKnown RBP13.61□□□□□ -0.23
SKA3-202ENST00000314759 SLC41A1Q8IVJ1 513 aa13.61□□□□□ -0.23
SKA3-202ENST00000314759 SMYD1Q8NB12 490 aa13.61□□□□□ -0.23
SKA3-202ENST00000314759 MAELQ96JY0 434 aaKnown RBP13.61□□□□□ -0.23
SKA3-202ENST00000314759 GBA3Q9H227 469 aa13.61□□□□□ -0.23
SKA3-202ENST00000314759 PLEKHA5Q9HAU0 1116 aa13.61□□□□□ -0.23
SKA3-202ENST00000314759 INIPQ9NRY2 104 aa13.61□□□□□ -0.23
SKA3-202ENST00000314759 THEGQ9P2T0 379 aa13.61□□□□□ -0.23
SKA3-202ENST00000314759 ZNF232Q9UNY5 417 aa13.61□□□□□ -0.23
SKA3-202ENST00000314759 TNS1Q9HBL0 1735 aaKnown RBP13.61□□□□□ -0.23
SKA3-202ENST00000314759 BPTFQ12830 3046 aa13.61□□□□□ -0.23
SKA3-202ENST00000314759 I6L893 689 aaPredicted RBP13.61□□□□□ -0.23
SKA3-202ENST00000314759 PLOD2O00469 737 aa13.61□□□□□ -0.23
SKA3-202ENST00000314759 SDHDO14521 159 aa13.61□□□□□ -0.23
SKA3-202ENST00000314759 SPTLC1O15269 473 aa13.61□□□□□ -0.23
SKA3-202ENST00000314759 AHSGP02765 367 aa13.61□□□□□ -0.23
SKA3-202ENST00000314759 LGALS2P05162 132 aa13.61□□□□□ -0.23
SKA3-202ENST00000314759 NFKB1P19838 968 aa13.61□□□□□ -0.23
SKA3-202ENST00000314759 NOS2P35228 1153 aa13.61□□□□□ -0.23
SKA3-202ENST00000314759 ALDH3B2P48448 385 aa13.61□□□□□ -0.23
SKA3-202ENST00000314759 SLC12A1Q13621 1099 aa13.61□□□□□ -0.23
SKA3-202ENST00000314759 VGLL4Q14135 290 aa13.61□□□□□ -0.23
SKA3-202ENST00000314759 SNX27Q96L92 541 aa13.61□□□□□ -0.23
SKA3-202ENST00000314759 GPR78Q96P69 363 aa13.61□□□□□ -0.23
SKA3-202ENST00000314759 DERAQ9Y315 318 aa13.61□□□□□ -0.23
SKA3-202ENST00000314759 WDR90Q96KV7 1748 aa13.61□□□□□ -0.23
SKA3-202ENST00000314759 ERI2A8K979 691 aaKnown RBP13.6□□□□□ -0.23
SKA3-202ENST00000314759 BEST1O76090 585 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 C8BP07358 591 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 ARSAP15289 507 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 CCR3P51677 355 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 CTBSQ01459 385 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 HFE2Q6ZVN8 426 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 CARM1Q86X55 608 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 CEP97Q8IW35 865 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 MYO1HQ8N1T3 1032 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 LRRC43Q8N309 656 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 BEST2Q8NFU1 509 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 HMGCLL1Q8TB92 370 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 PPP1R14BQ96C90 147 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 NXNL1Q96CM4 212 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 RANBP9Q96S59 729 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 SLC29A1Q99808 456 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 TXNRD2Q9NNW7 524 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 UTP6Q9NYH9 597 aaKnown RBP13.6□□□□□ -0.23
SKA3-202ENST00000314759 PIM2Q9P1W9 311 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 PLXNA1Q9UIW2 1896 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 SCN4AP35499 1836 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 ARHGEF37A1IGU5 675 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 H0YJX3 145 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 USP2O75604 605 aaPredicted RBP13.6□□□□□ -0.23
SKA3-202ENST00000314759 H6PDO95479 791 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 HOXA11P31270 313 aaPredicted RBP13.6□□□□□ -0.23
SKA3-202ENST00000314759 ADRA1BP35368 520 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 PSMD8P48556 350 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 PSMD7P51665 324 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 NAA20P61599 178 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 RHDQ02161 417 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 SLC44A4Q53GD3 710 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 GADL1Q6ZQY3 521 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 MFSD6LQ8IWD5 586 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 PELI3Q8N2H9 469 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 SLCO4A1Q96BD0 722 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 HAUS8Q9BT25 410 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 EIF2AQ9BY44 585 aaKnown RBP13.6□□□□□ -0.23
SKA3-202ENST00000314759 DNAI2Q9GZS0 605 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 OLAHQ9NV23 265 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 SUCOQ9UBS9 1254 aaKnown RBP13.6□□□□□ -0.23
SKA3-202ENST00000314759 EBF1Q9UH73 591 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 ACOT9Q9Y305 439 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 NUP205Q92621 2012 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 DNAJC25-GNG10A0A024R161 153 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 SH3PXD2BA1X283 911 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 PGK1P00558 417 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 CYP2C9P11712 490 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 HDCP19113 662 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 CD97P48960 835 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 RALGDSQ12967 914 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 PDAP1Q13442 181 aaKnown RBP13.6□□□□□ -0.23
SKA3-202ENST00000314759 TTLL4Q14679 1199 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 DGKDQ16760 1214 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 Q3C1V9 767 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 FBXO47Q5MNV8 452 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 MAMDC4Q6UXC1 1216 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.6□□□□□ -0.23
SKA3-202ENST00000314759 TRPM4Q8TD43 1214 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 GIPC3Q8TF64 312 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 WNT8BQ93098 351 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 DCUN1D5Q9BTE7 237 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 OSBPL11Q9BXB4 747 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 SNX25Q9H3E2 840 aa13.6□□□□□ -0.23
SKA3-202ENST00000314759 PPP1R1BQ9UD71 204 aaPredicted RBP13.6□□□□□ -0.23
SKA3-202ENST00000314759 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.6□□□□□ -0.23
SKA3-202ENST00000314759 CLDN5O00501 218 aa13.59□□□□□ -0.23
SKA3-202ENST00000314759 ZNF286BP0CG31 522 aa13.59□□□□□ -0.23
SKA3-202ENST00000314759 ARHGAP1Q07960 439 aa13.59□□□□□ -0.23
SKA3-202ENST00000314759 MTX3Q5HYI7 312 aa13.59□□□□□ -0.23
SKA3-202ENST00000314759 DLK2Q6UY11 383 aa13.59□□□□□ -0.23
SKA3-202ENST00000314759 PDZD4Q76G19 769 aaPredicted RBP13.59□□□□□ -0.23
SKA3-202ENST00000314759 DENND6AQ8IWF6 608 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms