RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 SLC13A4Q9UKG4 626 aa13.84□□□□□ -0.19
DDX54-202ENST00000314045 CNTN6Q9UQ52 1028 aa13.84□□□□□ -0.19
DDX54-202ENST00000314045 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.83□□□□□ -0.19
DDX54-202ENST00000314045 A0A1W2PPM1 405 aa13.83□□□□□ -0.19
DDX54-202ENST00000314045 ALADP13716 330 aa13.83□□□□□ -0.19
DDX54-202ENST00000314045 PPP3CCP48454 512 aa13.83□□□□□ -0.19
DDX54-202ENST00000314045 PTPRNQ16849 979 aa13.83□□□□□ -0.19
DDX54-202ENST00000314045 LINGO4Q6UY18 593 aa13.83□□□□□ -0.19
DDX54-202ENST00000314045 PIWIL1Q96J94 861 aaKnown RBP13.83□□□□□ -0.19
DDX54-202ENST00000314045 GBA3Q9H227 469 aa13.83□□□□□ -0.19
DDX54-202ENST00000314045 TLR6Q9Y2C9 796 aa13.83□□□□□ -0.19
DDX54-202ENST00000314045 ZFP37Q9Y6Q3 630 aaPredicted RBP13.83□□□□□ -0.19
DDX54-202ENST00000314045 DDX60LQ5H9U9 1706 aaKnown RBP13.83□□□□□ -0.19
DDX54-202ENST00000314045 FGF19O95750 216 aa13.83□□□□□ -0.2
DDX54-202ENST00000314045 PTPN2P17706 415 aa13.83□□□□□ -0.2
DDX54-202ENST00000314045 CALRP27797 417 aaKnown RBP13.83□□□□□ -0.2
DDX54-202ENST00000314045 MZF1P28698 734 aaPredicted RBP13.83□□□□□ -0.2
DDX54-202ENST00000314045 GPR15P49685 360 aa13.83□□□□□ -0.2
DDX54-202ENST00000314045 NAGLUP54802 743 aa13.83□□□□□ -0.2
DDX54-202ENST00000314045 NRLP54845 237 aa13.83□□□□□ -0.2
DDX54-202ENST00000314045 CDH4P55283 916 aa13.83□□□□□ -0.2
DDX54-202ENST00000314045 AP2B1P63010 937 aa13.83□□□□□ -0.2
DDX54-202ENST00000314045 DSC2Q02487 901 aa13.83□□□□□ -0.2
DDX54-202ENST00000314045 ANKS6Q68DC2 871 aa13.83□□□□□ -0.2
DDX54-202ENST00000314045 PKN3Q6P5Z2 889 aa13.83□□□□□ -0.2
DDX54-202ENST00000314045 PACS1Q6VY07 963 aa13.83□□□□□ -0.2
DDX54-202ENST00000314045 TMEM159Q96B96 161 aa13.83□□□□□ -0.2
DDX54-202ENST00000314045 HMCESQ96FZ2 354 aa13.83□□□□□ -0.2
DDX54-202ENST00000314045 SLC39A8Q9C0K1 460 aa13.83□□□□□ -0.2
DDX54-202ENST00000314045 KDM4CQ9H3R0 1056 aa13.83□□□□□ -0.2
DDX54-202ENST00000314045 KLC4Q9NSK0 619 aa13.83□□□□□ -0.2
DDX54-202ENST00000314045 E9PBE3 544 aa13.83□□□□□ -0.2
DDX54-202ENST00000314045 KLHL41O60662 606 aa13.83□□□□□ -0.2
DDX54-202ENST00000314045 GUCA1CO95843 209 aa13.83□□□□□ -0.2
DDX54-202ENST00000314045 MT-CYBP00156 380 aaPredicted RBP13.83□□□□□ -0.2
DDX54-202ENST00000314045 CCDC166P0CW27 439 aa13.83□□□□□ -0.2
DDX54-202ENST00000314045 GABRB2P47870 512 aa13.83□□□□□ -0.2
DDX54-202ENST00000314045 MAPKAPK2P49137 400 aa13.83□□□□□ -0.2
DDX54-202ENST00000314045 CLCN5P51795 746 aa13.83□□□□□ -0.2
DDX54-202ENST00000314045 TCEAL1Q15170 157 aa13.83□□□□□ -0.2
DDX54-202ENST00000314045 SLC41A1Q8IVJ1 513 aa13.83□□□□□ -0.2
DDX54-202ENST00000314045 PSMG2Q969U7 264 aa13.83□□□□□ -0.2
DDX54-202ENST00000314045 TEKT5Q96M29 485 aa13.83□□□□□ -0.2
DDX54-202ENST00000314045 C11orf84Q9BUA3 381 aaPredicted RBP13.83□□□□□ -0.2
DDX54-202ENST00000314045 SLC25A51Q9H1U9 297 aa13.83□□□□□ -0.2
DDX54-202ENST00000314045 OSGEPL1Q9H4B0 414 aa13.83□□□□□ -0.2
DDX54-202ENST00000314045 CHRAC1Q9NRG0 131 aa13.83□□□□□ -0.2
DDX54-202ENST00000314045 ORC6Q9Y5N6 252 aa13.83□□□□□ -0.2
DDX54-202ENST00000314045 MYH9P35579 1960 aaKnown RBP13.83□□□□□ -0.2
DDX54-202ENST00000314045 ARAP2Q8WZ64 1704 aa13.83□□□□□ -0.2
DDX54-202ENST00000314045 BTN3A1O00481 513 aa13.83□□□□□ -0.2
DDX54-202ENST00000314045 OR56A5P0C7T3 313 aa13.83□□□□□ -0.2
DDX54-202ENST00000314045 COPAP53621 1224 aa13.83□□□□□ -0.2
DDX54-202ENST00000314045 RPS24P62847 133 aaKnown RBP13.83□□□□□ -0.2
DDX54-202ENST00000314045 UBXN11Q5T124 520 aa13.83□□□□□ -0.2
DDX54-202ENST00000314045 PARP9Q8IXQ6 854 aa13.83□□□□□ -0.2
DDX54-202ENST00000314045 ZNF461Q8TAF7 563 aa13.83□□□□□ -0.2
DDX54-202ENST00000314045 KCNV2Q8TDN2 545 aa13.83□□□□□ -0.2
DDX54-202ENST00000314045 ACMSDQ8TDX5 336 aa13.83□□□□□ -0.2
DDX54-202ENST00000314045 GBP5Q96PP8 586 aa13.83□□□□□ -0.2
DDX54-202ENST00000314045 PANX3Q96QZ0 392 aa13.83□□□□□ -0.2
DDX54-202ENST00000314045 NDNQ99608 321 aa13.83□□□□□ -0.2
DDX54-202ENST00000314045 CCSER2Q9H7U1 834 aa13.83□□□□□ -0.2
DDX54-202ENST00000314045 ACTR8Q9H981 624 aa13.83□□□□□ -0.2
DDX54-202ENST00000314045 CLIC5Q9NZA1 410 aa13.83□□□□□ -0.2
DDX54-202ENST00000314045 HAO1Q9UJM8 370 aa13.83□□□□□ -0.2
DDX54-202ENST00000314045 MTMR11A4FU01 709 aa13.82□□□□□ -0.2
DDX54-202ENST00000314045 MYH7BA7E2Y1 1941 aa13.82□□□□□ -0.2
DDX54-202ENST00000314045 UBOX5O94941 541 aa13.82□□□□□ -0.2
DDX54-202ENST00000314045 CSF2RAP15509 400 aa13.82□□□□□ -0.2
DDX54-202ENST00000314045 MLLT6P55198 1093 aaPredicted RBP13.82□□□□□ -0.2
DDX54-202ENST00000314045 IL2P60568 153 aa13.82□□□□□ -0.2
DDX54-202ENST00000314045 BTKQ06187 659 aa13.82□□□□□ -0.2
DDX54-202ENST00000314045 ACTN3Q08043 901 aaPredicted RBP13.82□□□□□ -0.2
DDX54-202ENST00000314045 RASA2Q15283 850 aa13.82□□□□□ -0.2
DDX54-202ENST00000314045 SUGP1Q8IWZ8 645 aaKnown RBP13.82□□□□□ -0.2
DDX54-202ENST00000314045 ZCCHC2Q9C0B9 1178 aaKnown RBP13.82□□□□□ -0.2
DDX54-202ENST00000314045 OSBPL2Q9H1P3 480 aa13.82□□□□□ -0.2
DDX54-202ENST00000314045 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.82□□□□□ -0.2
DDX54-202ENST00000314045 TMEM59LQ9UK28 342 aa13.82□□□□□ -0.2
DDX54-202ENST00000314045 HAS3O00219 553 aa13.82□□□□□ -0.2
DDX54-202ENST00000314045 E2F6O75461 281 aa13.82□□□□□ -0.2
DDX54-202ENST00000314045 ACADMP11310 421 aa13.82□□□□□ -0.2
DDX54-202ENST00000314045 NDST2P52849 883 aa13.82□□□□□ -0.2
DDX54-202ENST00000314045 STX5Q13190 355 aa13.82□□□□□ -0.2
DDX54-202ENST00000314045 SGCGQ13326 291 aa13.82□□□□□ -0.2
DDX54-202ENST00000314045 CCDC142Q17RM4 750 aa13.82□□□□□ -0.2
DDX54-202ENST00000314045 CENPTQ96BT3 561 aa13.82□□□□□ -0.2
DDX54-202ENST00000314045 TMEM209Q96SK2 561 aa13.82□□□□□ -0.2
DDX54-202ENST00000314045 GPR62Q9BZJ7 368 aa13.82□□□□□ -0.2
DDX54-202ENST00000314045 ASB3Q9Y575 518 aa13.82□□□□□ -0.2
DDX54-202ENST00000314045 METTL18O95568 372 aa13.82□□□□□ -0.2
DDX54-202ENST00000314045 PRKAA2P54646 552 aa13.82□□□□□ -0.2
DDX54-202ENST00000314045 KCNK10P57789 538 aa13.82□□□□□ -0.2
DDX54-202ENST00000314045 HIST2H2ACQ16777 129 aaPredicted RBP13.82□□□□□ -0.2
DDX54-202ENST00000314045 HIST2H2AA3Q6FI13 130 aa13.82□□□□□ -0.2
DDX54-202ENST00000314045 RFWD2Q8NHY2 731 aa13.82□□□□□ -0.2
DDX54-202ENST00000314045 DTX3LQ8TDB6 740 aa13.82□□□□□ -0.2
DDX54-202ENST00000314045 SLC44A1Q8WWI5 657 aa13.82□□□□□ -0.2
DDX54-202ENST00000314045 HAUS8Q9BT25 410 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms