RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 UBA2Q9UBT2 640 aaPredicted RBP12.23□□□□□ -0.45
SCFD1-201ENST00000311943 HPCAL4Q9UM19 191 aa12.23□□□□□ -0.45
SCFD1-201ENST00000311943 CAPN6Q9Y6Q1 641 aa12.23□□□□□ -0.45
SCFD1-201ENST00000311943 TBC1D3DA0A087WVF3 549 aa12.23□□□□□ -0.45
SCFD1-201ENST00000311943 TBC1D3IA0A087WXS9 549 aa12.23□□□□□ -0.45
SCFD1-201ENST00000311943 TBC1D3EA0A087X179 549 aa12.23□□□□□ -0.45
SCFD1-201ENST00000311943 TBC1D3KA0A087X1G2 549 aa12.23□□□□□ -0.45
SCFD1-201ENST00000311943 TBC1D3FA6NER0 549 aaPredicted RBP12.23□□□□□ -0.45
SCFD1-201ENST00000311943 A8MX80 341 aa12.23□□□□□ -0.45
SCFD1-201ENST00000311943 TBC1D3LB9A6J9 549 aa12.23□□□□□ -0.45
SCFD1-201ENST00000311943 SPOPO43791 374 aa12.23□□□□□ -0.45
SCFD1-201ENST00000311943 PALMO75781 387 aa12.23□□□□□ -0.45
SCFD1-201ENST00000311943 TBC1D3HP0C7X1 549 aa12.23□□□□□ -0.45
SCFD1-201ENST00000311943 C7P10643 843 aa12.23□□□□□ -0.45
SCFD1-201ENST00000311943 PRLRP16471 622 aa12.23□□□□□ -0.45
SCFD1-201ENST00000311943 C5AR1P21730 350 aa12.23□□□□□ -0.45
SCFD1-201ENST00000311943 MAPK8P45983 427 aa12.23□□□□□ -0.45
SCFD1-201ENST00000311943 HCAR3P49019 387 aa12.23□□□□□ -0.45
SCFD1-201ENST00000311943 CSNK1EP49674 416 aaKnown RBP12.23□□□□□ -0.45
SCFD1-201ENST00000311943 VAV2P52735 878 aa12.23□□□□□ -0.45
SCFD1-201ENST00000311943 CCZ1BP86790 482 aa12.23□□□□□ -0.45
SCFD1-201ENST00000311943 CCZ1P86791 482 aaPredicted RBP12.23□□□□□ -0.45
SCFD1-201ENST00000311943 MYLK3Q32MK0 819 aa12.23□□□□□ -0.45
SCFD1-201ENST00000311943 TBC1D3GQ6DHY5 549 aa12.23□□□□□ -0.45
SCFD1-201ENST00000311943 TBC1D3CQ6IPX1 549 aa12.23□□□□□ -0.45
SCFD1-201ENST00000311943 NYAP1Q6ZVC0 841 aa12.23□□□□□ -0.45
SCFD1-201ENST00000311943 PSTKQ8IV42 348 aaKnown RBP12.23□□□□□ -0.45
SCFD1-201ENST00000311943 TBC1D3Q8IZP1 549 aaPredicted RBP12.23□□□□□ -0.45
SCFD1-201ENST00000311943 C1orf216Q8TAB5 229 aa12.23□□□□□ -0.45
SCFD1-201ENST00000311943 RNF157Q96PX1 679 aa12.23□□□□□ -0.45
SCFD1-201ENST00000311943 PPP1R9BQ96SB3 815 aa12.23□□□□□ -0.45
SCFD1-201ENST00000311943 LGMNQ99538 433 aa12.23□□□□□ -0.45
SCFD1-201ENST00000311943 SP110Q9HB58 689 aa12.23□□□□□ -0.45
SCFD1-201ENST00000311943 INTUQ9ULD6 942 aa12.23□□□□□ -0.45
SCFD1-201ENST00000311943 ZFR2Q9UPR6 939 aaKnown RBP12.23□□□□□ -0.45
SCFD1-201ENST00000311943 HEY1Q9Y5J3 304 aa12.23□□□□□ -0.45
SCFD1-201ENST00000311943 MEI4A8MW99 385 aa12.22□□□□□ -0.45
SCFD1-201ENST00000311943 H0Y8X5 98 aa12.22□□□□□ -0.45
SCFD1-201ENST00000311943 RNASEH1O60930 286 aaKnown RBP12.22□□□□□ -0.45
SCFD1-201ENST00000311943 FTCDO95954 541 aa12.22□□□□□ -0.45
SCFD1-201ENST00000311943 WNT1P04628 370 aa12.22□□□□□ -0.45
SCFD1-201ENST00000311943 PECAM1P16284 738 aaPredicted RBP12.22□□□□□ -0.45
SCFD1-201ENST00000311943 MAN1A1P33908 653 aa12.22□□□□□ -0.45
SCFD1-201ENST00000311943 VASPP50552 380 aaPredicted RBP12.22□□□□□ -0.45
SCFD1-201ENST00000311943 NAP1L1P55209 391 aaKnown RBP12.22□□□□□ -0.45
SCFD1-201ENST00000311943 FGL2Q14314 439 aa12.22□□□□□ -0.45
SCFD1-201ENST00000311943 TCEAL1Q15170 157 aa12.22□□□□□ -0.45
SCFD1-201ENST00000311943 DAAM2Q86T65 1068 aa12.22□□□□□ -0.45
SCFD1-201ENST00000311943 LRRC8AQ8IWT6 810 aa12.22□□□□□ -0.45
SCFD1-201ENST00000311943 ALG3Q92685 438 aa12.22□□□□□ -0.45
SCFD1-201ENST00000311943 SLC6A18Q96N87 628 aa12.22□□□□□ -0.45
SCFD1-201ENST00000311943 HEPHQ9BQS7 1158 aa12.22□□□□□ -0.45
SCFD1-201ENST00000311943 HEMGNQ9BXL5 484 aa12.22□□□□□ -0.45
SCFD1-201ENST00000311943 DTLQ9NZJ0 730 aa12.22□□□□□ -0.45
SCFD1-201ENST00000311943 ARHGAP42A6NI28 874 aa12.21□□□□□ -0.45
SCFD1-201ENST00000311943 KCNK1O00180 336 aa12.21□□□□□ -0.45
SCFD1-201ENST00000311943 CDX4O14627 284 aaPredicted RBP12.21□□□□□ -0.45
SCFD1-201ENST00000311943 ZNF806P0C7X5 589 aa12.21□□□□□ -0.45
SCFD1-201ENST00000311943 CLCN6P51797 869 aa12.21□□□□□ -0.45
SCFD1-201ENST00000311943 ZNF211Q13398 564 aaPredicted RBP12.21□□□□□ -0.45
SCFD1-201ENST00000311943 CSRP2Q16527 193 aa12.21□□□□□ -0.45
SCFD1-201ENST00000311943 TTC31Q49AM3 519 aaPredicted RBP12.21□□□□□ -0.45
SCFD1-201ENST00000311943 KIAA1328Q86T90 577 aa12.21□□□□□ -0.45
SCFD1-201ENST00000311943 SYT12Q8IV01 421 aa12.21□□□□□ -0.45
SCFD1-201ENST00000311943 PCDH20Q8N6Y1 951 aaKnown RBP12.21□□□□□ -0.45
SCFD1-201ENST00000311943 FAF2Q96CS3 445 aa12.21□□□□□ -0.45
SCFD1-201ENST00000311943 ADGRG1Q9Y653 693 aa12.21□□□□□ -0.45
SCFD1-201ENST00000311943 ASPMQ8IZT6 3477 aa12.21□□□□□ -0.45
SCFD1-201ENST00000311943 DCDC2BA2VCK2 349 aa12.21□□□□□ -0.46
SCFD1-201ENST00000311943 GOLGA6L3A6NEY3 463 aa12.21□□□□□ -0.46
SCFD1-201ENST00000311943 F5H423 210 aaPredicted RBP12.21□□□□□ -0.46
SCFD1-201ENST00000311943 SLC31A1O15431 190 aa12.21□□□□□ -0.46
SCFD1-201ENST00000311943 ARHGAP25P42331 645 aa12.21□□□□□ -0.46
SCFD1-201ENST00000311943 RECQLP46063 649 aaPredicted RBP12.21□□□□□ -0.46
SCFD1-201ENST00000311943 SCNN1BP51168 640 aa12.21□□□□□ -0.46
SCFD1-201ENST00000311943 ZBTB16Q05516 673 aa12.21□□□□□ -0.46
SCFD1-201ENST00000311943 SLC20A2Q08357 652 aa12.21□□□□□ -0.46
SCFD1-201ENST00000311943 LBRQ14739 615 aaKnown RBP12.21□□□□□ -0.46
SCFD1-201ENST00000311943 SLC36A4Q6YBV0 504 aa12.21□□□□□ -0.46
SCFD1-201ENST00000311943 LRRC57Q8N9N7 239 aa12.21□□□□□ -0.46
SCFD1-201ENST00000311943 GTPBP2Q9BX10 602 aaKnown RBP12.21□□□□□ -0.46
SCFD1-201ENST00000311943 CEP44Q9C0F1 390 aa12.21□□□□□ -0.46
SCFD1-201ENST00000311943 TMEM51Q9NW97 253 aa12.21□□□□□ -0.46
SCFD1-201ENST00000311943 PCDHGC4Q9Y5F7 938 aa12.21□□□□□ -0.46
SCFD1-201ENST00000311943 A0A1B0GVT2 93 aa12.2□□□□□ -0.46
SCFD1-201ENST00000311943 C16orf96A6NNT2 1141 aa12.2□□□□□ -0.46
SCFD1-201ENST00000311943 C10orf142B7Z368 130 aa12.2□□□□□ -0.46
SCFD1-201ENST00000311943 RAD51BO15315 384 aa12.2□□□□□ -0.46
SCFD1-201ENST00000311943 PLRG1O43660 514 aaKnown RBP12.2□□□□□ -0.46
SCFD1-201ENST00000311943 ADH1BP00325 375 aa12.2□□□□□ -0.46
SCFD1-201ENST00000311943 KRT7P08729 469 aa12.2□□□□□ -0.46
SCFD1-201ENST00000311943 ENGP17813 658 aa12.2□□□□□ -0.46
SCFD1-201ENST00000311943 CDKN2BP42772 138 aa12.2□□□□□ -0.46
SCFD1-201ENST00000311943 HADHBP55084 474 aaKnown RBP12.2□□□□□ -0.46
SCFD1-201ENST00000311943 CLDN2P57739 230 aa12.2□□□□□ -0.46
SCFD1-201ENST00000311943 IL10RBQ08334 325 aa12.2□□□□□ -0.46
SCFD1-201ENST00000311943 ZBTB17Q13105 803 aa12.2□□□□□ -0.46
SCFD1-201ENST00000311943 PAFAH1B3Q15102 231 aaKnown RBP12.2□□□□□ -0.46
SCFD1-201ENST00000311943 RSPO4Q2I0M5 234 aaPredicted RBP12.2□□□□□ -0.46
SCFD1-201ENST00000311943 KIAA0895LQ68EN5 471 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms