RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 FZD10Q9ULW2 581 aa11.28□□□□□ -0.6
PTPN7-201ENST00000309017 V9GYQ6 96 aa11.28□□□□□ -0.6
PTPN7-201ENST00000309017 ZCWPW2A0A1B0GU75 182 aa11.27□□□□□ -0.6
PTPN7-201ENST00000309017 FAM95CA0A1B0GW59 222 aa11.27□□□□□ -0.6
PTPN7-201ENST00000309017 SH3PXD2BA1X283 911 aa11.27□□□□□ -0.6
PTPN7-201ENST00000309017 PRORSD1PA6NEY8 169 aa11.27□□□□□ -0.6
PTPN7-201ENST00000309017 C9IYK1 514 aa11.27□□□□□ -0.6
PTPN7-201ENST00000309017 C19orf81C9J6K1 198 aa11.27□□□□□ -0.6
PTPN7-201ENST00000309017 MAP4P27816 1152 aaKnown RBP11.27□□□□□ -0.6
PTPN7-201ENST00000309017 SLC7A1P30825 629 aa11.27□□□□□ -0.6
PTPN7-201ENST00000309017 GNL1P36915 607 aaPredicted RBP11.27□□□□□ -0.6
PTPN7-201ENST00000309017 MATKP42679 507 aa11.27□□□□□ -0.6
PTPN7-201ENST00000309017 GLUD2P49448 558 aa11.27□□□□□ -0.6
PTPN7-201ENST00000309017 KPNA2P52292 529 aaKnown RBP11.27□□□□□ -0.6
PTPN7-201ENST00000309017 HK2P52789 917 aa11.27□□□□□ -0.6
PTPN7-201ENST00000309017 TXNL4AP83876 142 aaKnown RBP11.27□□□□□ -0.6
PTPN7-201ENST00000309017 UGP2Q16851 508 aa11.27□□□□□ -0.6
PTPN7-201ENST00000309017 FAM83EQ2M2I3 478 aa11.27□□□□□ -0.6
PTPN7-201ENST00000309017 XKR5Q6UX68 686 aa11.27□□□□□ -0.6
PTPN7-201ENST00000309017 CHSY3Q70JA7 882 aa11.27□□□□□ -0.6
PTPN7-201ENST00000309017 FBXO16Q8IX29 292 aaPredicted RBP11.27□□□□□ -0.6
PTPN7-201ENST00000309017 CPSF7Q8N684 471 aaKnown RBP11.27□□□□□ -0.6
PTPN7-201ENST00000309017 CELF6Q96J87 481 aaKnown RBP11.27□□□□□ -0.6
PTPN7-201ENST00000309017 TCF12Q99081 682 aa11.27□□□□□ -0.6
PTPN7-201ENST00000309017 GPR20Q99678 358 aa11.27□□□□□ -0.6
PTPN7-201ENST00000309017 DNAI2Q9GZS0 605 aa11.27□□□□□ -0.6
PTPN7-201ENST00000309017 IL22Q9GZX6 179 aa11.27□□□□□ -0.6
PTPN7-201ENST00000309017 MRPL46Q9H2W6 279 aaKnown RBP11.27□□□□□ -0.6
PTPN7-201ENST00000309017 SMARCAD1Q9H4L7 1026 aa11.27□□□□□ -0.6
PTPN7-201ENST00000309017 CXorf21Q9HAI6 301 aa11.27□□□□□ -0.6
PTPN7-201ENST00000309017 PCDHGA7Q9Y5G6 932 aa11.27□□□□□ -0.6
PTPN7-201ENST00000309017 NR5A2O00482 541 aa11.27□□□□□ -0.61
PTPN7-201ENST00000309017 CLOCKO15516 846 aa11.27□□□□□ -0.61
PTPN7-201ENST00000309017 ARIH2O95376 493 aa11.27□□□□□ -0.61
PTPN7-201ENST00000309017 UGT1A6P19224 532 aa11.27□□□□□ -0.61
PTPN7-201ENST00000309017 CBLBQ13191 982 aa11.27□□□□□ -0.61
PTPN7-201ENST00000309017 ANKDD1AQ495B1 522 aa11.27□□□□□ -0.61
PTPN7-201ENST00000309017 STRADAQ7RTN6 431 aa11.27□□□□□ -0.61
PTPN7-201ENST00000309017 TMEM135Q86UB9 458 aa11.27□□□□□ -0.61
PTPN7-201ENST00000309017 OFCC1Q8IZS5 231 aa11.27□□□□□ -0.61
PTPN7-201ENST00000309017 VPS45Q9NRW7 570 aa11.27□□□□□ -0.61
PTPN7-201ENST00000309017 OLAHQ9NV23 265 aa11.27□□□□□ -0.61
PTPN7-201ENST00000309017 CACNA2D2Q9NY47 1150 aa11.27□□□□□ -0.61
PTPN7-201ENST00000309017 PGAP2Q9UHJ9 254 aa11.27□□□□□ -0.61
PTPN7-201ENST00000309017 ZNF487B1APH4 448 aa11.27□□□□□ -0.61
PTPN7-201ENST00000309017 SDHDO14521 159 aa11.27□□□□□ -0.61
PTPN7-201ENST00000309017 TXNP10599 105 aaKnown RBP11.27□□□□□ -0.61
PTPN7-201ENST00000309017 TGFB3P10600 412 aa11.27□□□□□ -0.61
PTPN7-201ENST00000309017 HADHAP40939 763 aa11.27□□□□□ -0.61
PTPN7-201ENST00000309017 CASP2P42575 452 aa11.27□□□□□ -0.61
PTPN7-201ENST00000309017 ACADSBP45954 432 aa11.27□□□□□ -0.61
PTPN7-201ENST00000309017 INPP5AQ14642 412 aa11.27□□□□□ -0.61
PTPN7-201ENST00000309017 RFTN1Q14699 578 aaPredicted RBP11.27□□□□□ -0.61
PTPN7-201ENST00000309017 PPP1R3AQ16821 1122 aa11.27□□□□□ -0.61
PTPN7-201ENST00000309017 NAPEPLDQ6IQ20 393 aa11.27□□□□□ -0.61
PTPN7-201ENST00000309017 CLEC14AQ86T13 490 aa11.27□□□□□ -0.61
PTPN7-201ENST00000309017 ZC3HC1Q86WB0 502 aaKnown RBP11.27□□□□□ -0.61
PTPN7-201ENST00000309017 NT5DC4Q86YG4 428 aa11.27□□□□□ -0.61
PTPN7-201ENST00000309017 BBS5Q8N3I7 341 aa11.27□□□□□ -0.61
PTPN7-201ENST00000309017 RYBPQ8N488 228 aaPredicted RBP11.27□□□□□ -0.61
PTPN7-201ENST00000309017 ZBTB8BQ8NAP8 495 aaPredicted RBP11.27□□□□□ -0.61
PTPN7-201ENST00000309017 RNF169Q8NCN4 708 aa11.27□□□□□ -0.61
PTPN7-201ENST00000309017 PDZD8Q8NEN9 1154 aa11.27□□□□□ -0.61
PTPN7-201ENST00000309017 TNIP2Q8NFZ5 429 aa11.27□□□□□ -0.61
PTPN7-201ENST00000309017 RIN3Q8TB24 985 aa11.27□□□□□ -0.61
PTPN7-201ENST00000309017 PPP1R14BQ96C90 147 aa11.27□□□□□ -0.61
PTPN7-201ENST00000309017 SLC2A11Q9BYW1 496 aa11.27□□□□□ -0.61
PTPN7-201ENST00000309017 VRTNQ9H8Y1 702 aa11.27□□□□□ -0.61
PTPN7-201ENST00000309017 SELENONQ9NZV5 590 aa11.27□□□□□ -0.61
PTPN7-201ENST00000309017 CNOT11Q9UKZ1 510 aaKnown RBP11.27□□□□□ -0.61
PTPN7-201ENST00000309017 MRPL42Q9Y6G3 142 aaKnown RBP11.27□□□□□ -0.61
PTPN7-201ENST00000309017 MAGEB16A2A368 324 aa11.26□□□□□ -0.61
PTPN7-201ENST00000309017 C9JVG2 144 aa11.26□□□□□ -0.61
PTPN7-201ENST00000309017 SOCS2O14508 198 aa11.26□□□□□ -0.61
PTPN7-201ENST00000309017 GABBR2O75899 941 aa11.26□□□□□ -0.61
PTPN7-201ENST00000309017 GNAO1P09471 354 aa11.26□□□□□ -0.61
PTPN7-201ENST00000309017 INSRRP14616 1297 aa11.26□□□□□ -0.61
PTPN7-201ENST00000309017 NPY2RP49146 381 aa11.26□□□□□ -0.61
PTPN7-201ENST00000309017 NUMBP49757 651 aa11.26□□□□□ -0.61
PTPN7-201ENST00000309017 RAB10P61026 200 aa11.26□□□□□ -0.61
PTPN7-201ENST00000309017 TMEM62Q0P6H9 643 aa11.26□□□□□ -0.61
PTPN7-201ENST00000309017 CDH17Q12864 832 aa11.26□□□□□ -0.61
PTPN7-201ENST00000309017 PIWIL4Q7Z3Z4 852 aaKnown RBP11.26□□□□□ -0.61
PTPN7-201ENST00000309017 CARM1Q86X55 608 aa11.26□□□□□ -0.61
PTPN7-201ENST00000309017 CAMK1DQ8IU85 385 aa11.26□□□□□ -0.61
PTPN7-201ENST00000309017 ANKRD52Q8NB46 1076 aa11.26□□□□□ -0.61
PTPN7-201ENST00000309017 MTMR14Q8NCE2 650 aa11.26□□□□□ -0.61
PTPN7-201ENST00000309017 BEST2Q8NFU1 509 aa11.26□□□□□ -0.61
PTPN7-201ENST00000309017 HM13Q8TCT9 377 aa11.26□□□□□ -0.61
PTPN7-201ENST00000309017 SLC25A23Q9BV35 468 aa11.26□□□□□ -0.61
PTPN7-201ENST00000309017 EML4Q9HC35 981 aaKnown RBP11.26□□□□□ -0.61
PTPN7-201ENST00000309017 FAIMQ9NVQ4 179 aa11.26□□□□□ -0.61
PTPN7-201ENST00000309017 NSMCE4AQ9NXX6 385 aa11.26□□□□□ -0.61
PTPN7-201ENST00000309017 SNTG2Q9NY99 539 aa11.26□□□□□ -0.61
PTPN7-201ENST00000309017 SFMBT1Q9UHJ3 866 aa11.26□□□□□ -0.61
PTPN7-201ENST00000309017 A0A1W2PPW3 197 aa11.26□□□□□ -0.61
PTPN7-201ENST00000309017 SOWAHBA6NEL2 793 aa11.26□□□□□ -0.61
PTPN7-201ENST00000309017 NRP2O60462 931 aa11.26□□□□□ -0.61
PTPN7-201ENST00000309017 CBFA2T3O75081 653 aa11.26□□□□□ -0.61
PTPN7-201ENST00000309017 MAGEA10P43363 369 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms