RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 C2orf49Q9BVC5 232 aaPredicted RBP7.88□□□□□ -1.15
SCN9A-201ENST00000303354 GABRQQ9UN88 632 aa7.88□□□□□ -1.15
SCN9A-201ENST00000303354 ATXN2Q99700 1313 aaKnown RBP7.88□□□□□ -1.15
SCN9A-201ENST00000303354 ENO4A6NNW6 628 aa7.88□□□□□ -1.15
SCN9A-201ENST00000303354 M0R3G1 203 aa7.88□□□□□ -1.15
SCN9A-201ENST00000303354 SLC9A3R1O14745 358 aaPredicted RBP7.88□□□□□ -1.15
SCN9A-201ENST00000303354 DLGAP3O95886 979 aa7.88□□□□□ -1.15
SCN9A-201ENST00000303354 RPL21P46778 160 aaKnown RBP7.88□□□□□ -1.15
SCN9A-201ENST00000303354 TLE2Q04725 743 aa7.88□□□□□ -1.15
SCN9A-201ENST00000303354 GFOD2Q3B7J2 385 aa7.88□□□□□ -1.15
SCN9A-201ENST00000303354 ATXN7L2Q5T6C5 722 aaPredicted RBP7.88□□□□□ -1.15
SCN9A-201ENST00000303354 LRRC6Q86X45 466 aa7.88□□□□□ -1.15
SCN9A-201ENST00000303354 RNF145Q96MT1 663 aa7.88□□□□□ -1.15
SCN9A-201ENST00000303354 S100A13Q99584 98 aa7.88□□□□□ -1.15
SCN9A-201ENST00000303354 SEMA4AQ9H3S1 761 aa7.88□□□□□ -1.15
SCN9A-201ENST00000303354 AGO1Q9UL18 857 aaKnown RBP7.88□□□□□ -1.15
SCN9A-201ENST00000303354 ARL5CA6NH57 179 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 SP2Q02086 613 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 PPIGQ13427 754 aaKnown RBP eCLIP7.87□□□□□ -1.151e-6■■□□□ 11.6
SCN9A-201ENST00000303354 FASTKQ14296 549 aaKnown RBP7.87□□□□□ -1.15
SCN9A-201ENST00000303354 ZNF618Q5T7W0 954 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 ZDHHC20Q5W0Z9 365 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 ENPP7Q6UWV6 458 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 TNIP2Q8NFZ5 429 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 FAM110BQ8TC76 370 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 WNT8BQ93098 351 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 UROC1Q96N76 676 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 TMEM237Q96Q45 408 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 ING3Q9NXR8 418 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 MRPL39Q9NYK5 338 aaKnown RBP7.87□□□□□ -1.15
SCN9A-201ENST00000303354 CNOT6Q9ULM6 557 aaKnown RBP7.87□□□□□ -1.15
SCN9A-201ENST00000303354 SALL1Q9NSC2 1324 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 NPEPPSL1A6NEC2 478 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 H3BSH0 61 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 TPST2O60704 377 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 GRTP1Q5TC63 336 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 C9orf57Q5W0N0 161 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 BNC2Q6ZN30 1099 aaPredicted RBP7.87□□□□□ -1.15
SCN9A-201ENST00000303354 UNC5AQ6ZN44 842 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 SLAIN1Q8ND83 568 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 FTHL17Q9BXU8 183 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 VPS51Q9UID3 782 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 ADAMTS13Q76LX8 1427 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 DIP2BQ9P265 1576 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 CROCC2H7BZ55 1655 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 PIPSLA2A3N6 862 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 PAGE1O75459 146 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 CCNG2Q16589 344 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 RHBDF2Q6PJF5 856 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 RNF19BQ6ZMZ0 732 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 SH3BP5LQ7L8J4 393 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 OLFM1Q99784 485 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 GALNT8Q9NY28 637 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 MTF2Q9Y483 593 aaPredicted RBP7.87□□□□□ -1.15
SCN9A-201ENST00000303354 MYOCOSA0A1B0GUC4 107 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 RPN2P04844 631 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 FUT4P22083 530 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 RANBP1P43487 201 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 SEPHS1P49903 392 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 STXBP1P61764 594 aaKnown RBP7.87□□□□□ -1.15
SCN9A-201ENST00000303354 JOSD2Q8TAC2 188 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 TCP10LQ8TDR4 215 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 HERVK_113Q902F9 699 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 TEKT5Q96M29 485 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 SLC38A3Q99624 504 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 ASB7Q9H672 318 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 PALMDQ9NP74 551 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 KLC4Q9NSK0 619 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 TRPM1Q7Z4N2 1603 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 ZNF536O15090 1300 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 C1RP00736 705 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 ERBB2P04626 1255 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 KCNA3P22001 575 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 KDELR1P24390 212 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 RNF144AP50876 292 aaPredicted RBP7.87□□□□□ -1.15
SCN9A-201ENST00000303354 ATXN1P54253 815 aaKnown RBP7.87□□□□□ -1.15
SCN9A-201ENST00000303354 PTPRNQ16849 979 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 TRPM8Q7Z2W7 1104 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 VSIG10LQ86VR7 867 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 TMEM86AQ8N2M4 240 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 CDYL2Q8N8U2 506 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 JPH3Q8WXH2 748 aaPredicted RBP7.87□□□□□ -1.15
SCN9A-201ENST00000303354 PANX3Q96QZ0 392 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 AARSD1Q9BTE6 412 aaKnown RBP7.87□□□□□ -1.15
SCN9A-201ENST00000303354 FBXW2Q9UKT8 454 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 SOX13Q9UN79 622 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 PCDHGC4Q9Y5F7 938 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 PTCH2Q9Y6C5 1203 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 KRT6AP02538 564 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 APOA1P02647 267 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 KRT6BP04259 564 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 KRT6CP48668 564 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 FCRL2Q96LA5 508 aaPredicted RBP7.87□□□□□ -1.15
SCN9A-201ENST00000303354 GPR20Q99678 358 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 FANCEQ9HB96 536 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 POLR1AO95602 1720 aaPredicted RBP7.87□□□□□ -1.15
SCN9A-201ENST00000303354 PPP1R37O75864 691 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 TBX18O95935 607 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 NTSP30990 170 aa7.87□□□□□ -1.15
SCN9A-201ENST00000303354 BUD31P41223 144 aaPredicted RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms