RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 CNSTQ6PJW8 725 aa24.71■■□□□ 1.55
SPTSSA-201ENST00000298130 LAYNQ6UX15 382 aa24.71■■□□□ 1.55
SPTSSA-201ENST00000298130 PIP4K2CQ8TBX8 421 aa24.71■■□□□ 1.55
SPTSSA-201ENST00000298130 STYXQ8WUJ0 223 aa24.71■■□□□ 1.55
SPTSSA-201ENST00000298130 ABHD16BQ9H3Z7 469 aa24.71■■□□□ 1.55
SPTSSA-201ENST00000298130 A0A1B0GTW7 788 aa24.7■■□□□ 1.54
SPTSSA-201ENST00000298130 NSUN2Q08J23 767 aaKnown RBP eCLIP24.7■■□□□ 1.54
SPTSSA-201ENST00000298130 PRKAA1Q13131 559 aa24.7■■□□□ 1.54
SPTSSA-201ENST00000298130 SLC12A1Q13621 1099 aa24.7■■□□□ 1.54
SPTSSA-201ENST00000298130 PPP1R3AQ16821 1122 aa24.7■■□□□ 1.54
SPTSSA-201ENST00000298130 ZNF470Q6ECI4 717 aa24.7■■□□□ 1.54
SPTSSA-201ENST00000298130 NAPEPLDQ6IQ20 393 aa24.7■■□□□ 1.54
SPTSSA-201ENST00000298130 C16orf89Q6UX73 402 aa24.7■■□□□ 1.54
SPTSSA-201ENST00000298130 BHLHA9Q7RTU4 235 aa24.7■■□□□ 1.54
SPTSSA-201ENST00000298130 LDB1Q86U70 411 aaPredicted RBP24.7■■□□□ 1.54
SPTSSA-201ENST00000298130 SFMBT1Q9UHJ3 866 aa24.7■■□□□ 1.54
SPTSSA-201ENST00000298130 TTC24A2A3L6 582 aaPredicted RBP24.7■■□□□ 1.54
SPTSSA-201ENST00000298130 CABYRO75952 493 aa24.7■■□□□ 1.54
SPTSSA-201ENST00000298130 MOCS2O96007 188 aaPredicted RBP24.7■■□□□ 1.54
SPTSSA-201ENST00000298130 NELFEP18615 380 aaKnown RBP24.7■■□□□ 1.54
SPTSSA-201ENST00000298130 RP9Q8TA86 221 aaKnown RBP24.7■■□□□ 1.54
SPTSSA-201ENST00000298130 HEXDCQ8WVB3 486 aa24.7■■□□□ 1.54
SPTSSA-201ENST00000298130 TRHDEQ9UKU6 1024 aa24.7■■□□□ 1.54
SPTSSA-201ENST00000298130 CCL15-CCL14A0A0B4J2E2 113 aa24.69■■□□□ 1.54
SPTSSA-201ENST00000298130 CASQ2O14958 399 aaPredicted RBP24.69■■□□□ 1.54
SPTSSA-201ENST00000298130 CSPG5O95196 566 aa24.69■■□□□ 1.54
SPTSSA-201ENST00000298130 CRTAMO95727 393 aa24.69■■□□□ 1.54
SPTSSA-201ENST00000298130 F2P00734 622 aa24.69■■□□□ 1.54
SPTSSA-201ENST00000298130 CTSHP09668 335 aa24.69■■□□□ 1.54
SPTSSA-201ENST00000298130 CDKL1Q00532 357 aa24.69■■□□□ 1.54
SPTSSA-201ENST00000298130 PRPSAP1Q14558 356 aa24.69■■□□□ 1.54
SPTSSA-201ENST00000298130 CCL15Q16663 113 aa24.69■■□□□ 1.54
SPTSSA-201ENST00000298130 XKR4Q5GH76 650 aa24.69■■□□□ 1.54
SPTSSA-201ENST00000298130 SLC9A7Q96T83 725 aa24.69■■□□□ 1.54
SPTSSA-201ENST00000298130 POMKQ9H5K3 350 aa24.69■■□□□ 1.54
SPTSSA-201ENST00000298130 OCEL1Q9H607 264 aa24.69■■□□□ 1.54
SPTSSA-201ENST00000298130 MAGEB16A2A368 324 aa24.69■■□□□ 1.54
SPTSSA-201ENST00000298130 CCDC160A6NGH7 325 aa24.69■■□□□ 1.54
SPTSSA-201ENST00000298130 FGFR3P22607 806 aa24.69■■□□□ 1.54
SPTSSA-201ENST00000298130 SCAPQ12770 1279 aa24.69■■□□□ 1.54
SPTSSA-201ENST00000298130 RALGDSQ12967 914 aa24.69■■□□□ 1.54
SPTSSA-201ENST00000298130 OLFML2BQ68BL8 750 aa24.69■■□□□ 1.54
SPTSSA-201ENST00000298130 PKN3Q6P5Z2 889 aa24.69■■□□□ 1.54
SPTSSA-201ENST00000298130 KDM1BQ8NB78 822 aa24.69■■□□□ 1.54
SPTSSA-201ENST00000298130 PHF21BQ96EK2 531 aa24.69■■□□□ 1.54
SPTSSA-201ENST00000298130 GPR78Q96P69 363 aa24.69■■□□□ 1.54
SPTSSA-201ENST00000298130 TMEM209Q96SK2 561 aa24.69■■□□□ 1.54
SPTSSA-201ENST00000298130 SERPINI1Q99574 410 aa24.69■■□□□ 1.54
SPTSSA-201ENST00000298130 TBL1YQ9BQ87 522 aa24.69■■□□□ 1.54
SPTSSA-201ENST00000298130 KIFC1Q9BW19 673 aa24.69■■□□□ 1.54
SPTSSA-201ENST00000298130 OSBPL2Q9H1P3 480 aa24.69■■□□□ 1.54
SPTSSA-201ENST00000298130 CLGNO14967 610 aa24.68■■□□□ 1.54
SPTSSA-201ENST00000298130 NCAM2O15394 837 aa24.68■■□□□ 1.54
SPTSSA-201ENST00000298130 TRPA1O75762 1119 aa24.68■■□□□ 1.54
SPTSSA-201ENST00000298130 STMN1P16949 149 aa24.68■■□□□ 1.54
SPTSSA-201ENST00000298130 RAB10P61026 200 aa24.68■■□□□ 1.54
SPTSSA-201ENST00000298130 NRF1Q16656 503 aa24.68■■□□□ 1.54
SPTSSA-201ENST00000298130 PPP1R10Q96QC0 940 aaKnown RBP24.68■■□□□ 1.54
SPTSSA-201ENST00000298130 TRPV6Q9H1D0 765 aa24.68■■□□□ 1.54
SPTSSA-201ENST00000298130 MPP6Q9NZW5 540 aa24.68■■□□□ 1.54
SPTSSA-201ENST00000298130 GMPR2Q9P2T1 348 aaKnown RBP24.68■■□□□ 1.54
SPTSSA-201ENST00000298130 AP4B1Q9Y6B7 739 aa24.68■■□□□ 1.54
SPTSSA-201ENST00000298130 MBLAC1A4D2B0 266 aaPredicted RBP24.68■■□□□ 1.54
SPTSSA-201ENST00000298130 TARM1B6A8C7 271 aa24.68■■□□□ 1.54
SPTSSA-201ENST00000298130 ZBTB26Q9HCK0 441 aa24.68■■□□□ 1.54
SPTSSA-201ENST00000298130 CNGB3Q9NQW8 809 aa24.68■■□□□ 1.54
SPTSSA-201ENST00000298130 TCAF2A6NFQ2 919 aa24.67■■□□□ 1.54
SPTSSA-201ENST00000298130 HHLA1C9JL84 531 aa24.67■■□□□ 1.54
SPTSSA-201ENST00000298130 SMIM18P0DKX4 95 aa24.67■■□□□ 1.54
SPTSSA-201ENST00000298130 TLK2Q86UE8 772 aa24.67■■□□□ 1.54
SPTSSA-201ENST00000298130 NAT14Q8WUY8 206 aa24.67■■□□□ 1.54
SPTSSA-201ENST00000298130 ZFAND2BQ8WV99 257 aa24.67■■□□□ 1.54
SPTSSA-201ENST00000298130 ATP6V1E2Q96A05 226 aa24.67■■□□□ 1.54
SPTSSA-201ENST00000298130 MYLPFQ96A32 169 aa24.67■■□□□ 1.54
SPTSSA-201ENST00000298130 BRD8Q9H0E9 1235 aa24.67■■□□□ 1.54
SPTSSA-201ENST00000298130 TTC3P53804 2025 aa24.67■■□□□ 1.54
SPTSSA-201ENST00000298130 ATP6AP2A0A1C7CYW4 349 aa24.67■■□□□ 1.54
SPTSSA-201ENST00000298130 ERI2A8K979 691 aaKnown RBP24.67■■□□□ 1.54
SPTSSA-201ENST00000298130 PEX1O43933 1283 aa24.67■■□□□ 1.54
SPTSSA-201ENST00000298130 ATP6AP2O75787 350 aa24.67■■□□□ 1.54
SPTSSA-201ENST00000298130 HOXD8P13378 290 aaPredicted RBP24.67■■□□□ 1.54
SPTSSA-201ENST00000298130 DENND5AQ6IQ26 1287 aa24.67■■□□□ 1.54
SPTSSA-201ENST00000298130 TRIM67Q6ZTA4 783 aa24.67■■□□□ 1.54
SPTSSA-201ENST00000298130 DQX1Q8TE96 717 aaKnown RBP24.67■■□□□ 1.54
SPTSSA-201ENST00000298130 CNDP1Q96KN2 507 aa24.67■■□□□ 1.54
SPTSSA-201ENST00000298130 GRIP2Q9C0E4 1043 aa24.67■■□□□ 1.54
SPTSSA-201ENST00000298130 DNAI2Q9GZS0 605 aa24.67■■□□□ 1.54
SPTSSA-201ENST00000298130 SPON1Q9HCB6 807 aa24.67■■□□□ 1.54
SPTSSA-201ENST00000298130 TMLHEQ9NVH6 421 aa24.67■■□□□ 1.54
SPTSSA-201ENST00000298130 RIMS3Q9UJD0 308 aa24.67■■□□□ 1.54
SPTSSA-201ENST00000298130 CALRP27797 417 aaKnown RBP24.66■■□□□ 1.54
SPTSSA-201ENST00000298130 CXCR3P49682 368 aa24.66■■□□□ 1.54
SPTSSA-201ENST00000298130 SCNN1GP51170 649 aa24.66■■□□□ 1.54
SPTSSA-201ENST00000298130 GRM2Q14416 872 aa24.66■■□□□ 1.54
SPTSSA-201ENST00000298130 PCID2Q5JVF3 399 aa24.66■■□□□ 1.54
SPTSSA-201ENST00000298130 ATPAF2Q8N5M1 289 aa24.66■■□□□ 1.54
SPTSSA-201ENST00000298130 DNAJC1Q96KC8 554 aaKnown RBP24.66■■□□□ 1.54
SPTSSA-201ENST00000298130 SLC39A8Q9C0K1 460 aa24.66■■□□□ 1.54
SPTSSA-201ENST00000298130 CCDC167Q9P0B6 97 aa24.66■■□□□ 1.54
SPTSSA-201ENST00000298130 GNEQ9Y223 722 aaKnown RBP24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms