RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 CKMT1AP12532 417 aa19.95■□□□□ 0.78
CXCL3-201ENST00000296026 GKP32189 559 aa19.95■□□□□ 0.78
CXCL3-201ENST00000296026 PTPN9P43378 593 aa19.95■□□□□ 0.78
CXCL3-201ENST00000296026 JAM2P57087 298 aa19.95■□□□□ 0.78
CXCL3-201ENST00000296026 GEMIN4P57678 1058 aaKnown RBP19.95■□□□□ 0.78
CXCL3-201ENST00000296026 CDKAL1Q5VV42 579 aa19.95■□□□□ 0.78
CXCL3-201ENST00000296026 KYAT3Q6YP21 454 aaKnown RBP19.95■□□□□ 0.78
CXCL3-201ENST00000296026 KDM7AQ6ZMT4 941 aa19.95■□□□□ 0.78
CXCL3-201ENST00000296026 TRIM72Q6ZMU5 477 aa19.95■□□□□ 0.78
CXCL3-201ENST00000296026 LRRC69Q6ZNQ3 347 aa19.95■□□□□ 0.78
CXCL3-201ENST00000296026 STRADAQ7RTN6 431 aa19.95■□□□□ 0.78
CXCL3-201ENST00000296026 CCDC185Q8N715 623 aa19.95■□□□□ 0.78
CXCL3-201ENST00000296026 APOLD1Q96LR9 279 aa19.95■□□□□ 0.78
CXCL3-201ENST00000296026 MAGEH1Q9H213 219 aa19.95■□□□□ 0.78
CXCL3-201ENST00000296026 GPR27Q9NS67 375 aa19.95■□□□□ 0.78
CXCL3-201ENST00000296026 NLGN3Q9NZ94 848 aa19.95■□□□□ 0.78
CXCL3-201ENST00000296026 HPCAL4Q9UM19 191 aa19.95■□□□□ 0.78
CXCL3-201ENST00000296026 C16orf96A6NNT2 1141 aa19.94■□□□□ 0.78
CXCL3-201ENST00000296026 TSPAN6O43657 245 aa19.94■□□□□ 0.78
CXCL3-201ENST00000296026 TPM2P07951 284 aa19.94■□□□□ 0.78
CXCL3-201ENST00000296026 PLEKP08567 350 aaPredicted RBP19.94■□□□□ 0.78
CXCL3-201ENST00000296026 ABL2P42684 1182 aa19.94■□□□□ 0.78
CXCL3-201ENST00000296026 HDAC4P56524 1084 aa19.94■□□□□ 0.78
CXCL3-201ENST00000296026 HNRNPKP61978 463 aaKnown RBP eCLIP19.94■□□□□ 0.78
CXCL3-201ENST00000296026 SGCGQ13326 291 aa19.94■□□□□ 0.78
CXCL3-201ENST00000296026 FZD2Q14332 565 aa19.94■□□□□ 0.78
CXCL3-201ENST00000296026 POLD3Q15054 466 aaPredicted RBP19.94■□□□□ 0.78
CXCL3-201ENST00000296026 FKBP15Q5T1M5 1219 aa19.94■□□□□ 0.78
CXCL3-201ENST00000296026 LEKR1Q6ZMV7 388 aa19.94■□□□□ 0.78
CXCL3-201ENST00000296026 OR2AP1Q8NGE2 309 aa19.94■□□□□ 0.78
CXCL3-201ENST00000296026 FAM172AQ8WUF8 416 aa19.94■□□□□ 0.78
CXCL3-201ENST00000296026 CENPIQ92674 756 aaPredicted RBP19.94■□□□□ 0.78
CXCL3-201ENST00000296026 TBC1D31Q96DN5 1066 aa19.94■□□□□ 0.78
CXCL3-201ENST00000296026 PCDHB18PQ96TA0 734 aa19.94■□□□□ 0.78
CXCL3-201ENST00000296026 C1QTNF2Q9BXJ5 285 aa19.94■□□□□ 0.78
CXCL3-201ENST00000296026 NEU3Q9UQ49 428 aa19.94■□□□□ 0.78
CXCL3-201ENST00000296026 LAMA5O15230 3695 aa19.94■□□□□ 0.78
CXCL3-201ENST00000296026 BAHCC1Q9P281 2608 aa19.94■□□□□ 0.78
CXCL3-201ENST00000296026 CHD5Q8TDI0 1954 aa19.94■□□□□ 0.78
CXCL3-201ENST00000296026 SPTY2D1-AS1A0A0U1RR47 76 aa19.93■□□□□ 0.78
CXCL3-201ENST00000296026 IGLON5A6NGN9 336 aa19.93■□□□□ 0.78
CXCL3-201ENST00000296026 KRIT1O00522 736 aa19.93■□□□□ 0.78
CXCL3-201ENST00000296026 NEMP1O14524 444 aa19.93■□□□□ 0.78
CXCL3-201ENST00000296026 FPGTO14772 594 aa19.93■□□□□ 0.78
CXCL3-201ENST00000296026 SCAMP1O15126 338 aa19.93■□□□□ 0.78
CXCL3-201ENST00000296026 RRP8O43159 456 aaKnown RBP19.93■□□□□ 0.78
CXCL3-201ENST00000296026 BRINP1O60477 761 aa19.93■□□□□ 0.78
CXCL3-201ENST00000296026 RAMP2O60895 175 aa19.93■□□□□ 0.78
CXCL3-201ENST00000296026 NEBLO76041 1014 aa19.93■□□□□ 0.78
CXCL3-201ENST00000296026 GSRP00390 522 aa19.93■□□□□ 0.78
CXCL3-201ENST00000296026 KRT3P12035 628 aa19.93■□□□□ 0.78
CXCL3-201ENST00000296026 UNGP13051 313 aaPredicted RBP19.93■□□□□ 0.78
CXCL3-201ENST00000296026 MYF5P13349 255 aa19.93■□□□□ 0.78
CXCL3-201ENST00000296026 RFC1P35251 1148 aaPredicted RBP19.93■□□□□ 0.78
CXCL3-201ENST00000296026 STAT1P42224 750 aa19.93■□□□□ 0.78
CXCL3-201ENST00000296026 NSFP46459 744 aaKnown RBP19.93■□□□□ 0.78
CXCL3-201ENST00000296026 RABIFP47224 123 aa19.93■□□□□ 0.78
CXCL3-201ENST00000296026 SNRPD1P62314 119 aaKnown RBP19.93■□□□□ 0.78
CXCL3-201ENST00000296026 PTP4A2Q12974 167 aa19.93■□□□□ 0.78
CXCL3-201ENST00000296026 ZNF805Q5CZA5 627 aa19.93■□□□□ 0.78
CXCL3-201ENST00000296026 ZSCAN30Q86W11 494 aa19.93■□□□□ 0.78
CXCL3-201ENST00000296026 SNIP1Q8TAD8 396 aaKnown RBP19.93■□□□□ 0.78
CXCL3-201ENST00000296026 BAP1Q92560 729 aa19.93■□□□□ 0.78
CXCL3-201ENST00000296026 RAB7BQ96AH8 199 aa19.93■□□□□ 0.78
CXCL3-201ENST00000296026 LENG8Q96PV6 779 aaPredicted RBP19.93■□□□□ 0.78
CXCL3-201ENST00000296026 KLF6Q99612 283 aaPredicted RBP19.93■□□□□ 0.78
CXCL3-201ENST00000296026 IPO11Q9UI26 975 aaKnown RBP19.93■□□□□ 0.78
CXCL3-201ENST00000296026 GGT7Q9UJ14 662 aa19.93■□□□□ 0.78
CXCL3-201ENST00000296026 ITM2BQ9Y287 266 aa19.93■□□□□ 0.78
CXCL3-201ENST00000296026 DAAM1Q9Y4D1 1078 aa19.93■□□□□ 0.78
CXCL3-201ENST00000296026 CELSR3Q9NYQ7 3312 aa19.93■□□□□ 0.78
CXCL3-201ENST00000296026 H3BM21 787 aa19.92■□□□□ 0.78
CXCL3-201ENST00000296026 K7ESM1 405 aa19.92■□□□□ 0.78
CXCL3-201ENST00000296026 OPA1O60313 960 aa19.92■□□□□ 0.78
CXCL3-201ENST00000296026 POP4O95707 220 aaKnown RBP19.92■□□□□ 0.78
CXCL3-201ENST00000296026 CSF2P04141 144 aa19.92■□□□□ 0.78
CXCL3-201ENST00000296026 UGT2B4P06133 528 aa19.92■□□□□ 0.78
CXCL3-201ENST00000296026 NME1P15531 152 aaKnown RBP19.92■□□□□ 0.78
CXCL3-201ENST00000296026 PDE1CQ14123 709 aaPredicted RBP19.92■□□□□ 0.78
CXCL3-201ENST00000296026 MYLK3Q32MK0 819 aa19.92■□□□□ 0.78
CXCL3-201ENST00000296026 PARGQ86W56 976 aa19.92■□□□□ 0.78
CXCL3-201ENST00000296026 FAM181AQ8N9Y4 354 aa19.92■□□□□ 0.78
CXCL3-201ENST00000296026 ZNF548Q8NEK5 533 aaPredicted RBP19.92■□□□□ 0.78
CXCL3-201ENST00000296026 FGF11Q92914 225 aa19.92■□□□□ 0.78
CXCL3-201ENST00000296026 NTAN1Q96AB6 310 aa19.92■□□□□ 0.78
CXCL3-201ENST00000296026 VOPP1Q96AW1 172 aa19.92■□□□□ 0.78
CXCL3-201ENST00000296026 KLHL32Q96NJ5 620 aa19.92■□□□□ 0.78
CXCL3-201ENST00000296026 DUSP23Q9BVJ7 150 aa19.92■□□□□ 0.78
CXCL3-201ENST00000296026 SELENOOQ9BVL4 669 aa19.92■□□□□ 0.78
CXCL3-201ENST00000296026 ADAM22Q9P0K1 906 aa19.92■□□□□ 0.78
CXCL3-201ENST00000296026 SIK3Q9Y2K2 1263 aa19.92■□□□□ 0.78
CXCL3-201ENST00000296026 PCDHB1Q9Y5F3 818 aa19.92■□□□□ 0.78
CXCL3-201ENST00000296026 IGSF10Q6WRI0 2623 aa19.91■□□□□ 0.78
CXCL3-201ENST00000296026 LY6G6EA0A0G2JKS1 128 aa19.91■□□□□ 0.78
CXCL3-201ENST00000296026 KDELR3O43731 214 aa19.91■□□□□ 0.78
CXCL3-201ENST00000296026 GPD1P21695 349 aa19.91■□□□□ 0.78
CXCL3-201ENST00000296026 ACTN2P35609 894 aa19.91■□□□□ 0.78
CXCL3-201ENST00000296026 DUSP3P51452 185 aaPredicted RBP19.91■□□□□ 0.78
CXCL3-201ENST00000296026 GSCP56915 257 aaPredicted RBP19.91■□□□□ 0.78
CXCL3-201ENST00000296026 TPRG1LQ5T0D9 272 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms