RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 CDH17Q12864 832 aa14.88□□□□□ -0.03
CCNF-201ENST00000293968 LAMC2Q13753 1193 aa14.88□□□□□ -0.03
CCNF-201ENST00000293968 TMEM135Q86UB9 458 aa14.88□□□□□ -0.03
CCNF-201ENST00000293968 ZC3HC1Q86WB0 502 aaKnown RBP14.88□□□□□ -0.03
CCNF-201ENST00000293968 DHFR2Q86XF0 187 aa14.88□□□□□ -0.03
CCNF-201ENST00000293968 ZNF354CQ86Y25 554 aa14.88□□□□□ -0.03
CCNF-201ENST00000293968 MLPHQ9BV36 600 aaPredicted RBP14.88□□□□□ -0.03
CCNF-201ENST00000293968 RHOJQ9H4E5 214 aa14.88□□□□□ -0.03
CCNF-201ENST00000293968 ARID2Q68CP9 1835 aa14.88□□□□□ -0.03
CCNF-201ENST00000293968 CLIC3O95833 236 aa14.88□□□□□ -0.03
CCNF-201ENST00000293968 RPS6KA2Q15349 733 aa14.88□□□□□ -0.03
CCNF-201ENST00000293968 FAM83EQ2M2I3 478 aa14.88□□□□□ -0.03
CCNF-201ENST00000293968 REP15Q6BDI9 236 aa14.88□□□□□ -0.03
CCNF-201ENST00000293968 CLEC6AQ6EIG7 209 aa14.88□□□□□ -0.03
CCNF-201ENST00000293968 CNTD1Q8N815 330 aa14.88□□□□□ -0.03
CCNF-201ENST00000293968 TMEM102Q8N9M5 508 aaPredicted RBP14.88□□□□□ -0.03
CCNF-201ENST00000293968 AFG1LQ8WV93 481 aa14.88□□□□□ -0.03
CCNF-201ENST00000293968 FICDQ9BVA6 458 aa14.88□□□□□ -0.03
CCNF-201ENST00000293968 DNAI2Q9GZS0 605 aa14.88□□□□□ -0.03
CCNF-201ENST00000293968 IL22Q9GZX6 179 aa14.88□□□□□ -0.03
CCNF-201ENST00000293968 PAIP1Q9H074 479 aaKnown RBP14.88□□□□□ -0.03
CCNF-201ENST00000293968 PIM1P11309 404 aaPredicted RBP14.88□□□□□ -0.03
CCNF-201ENST00000293968 EEF1B2P24534 225 aaKnown RBP14.88□□□□□ -0.03
CCNF-201ENST00000293968 TKTP29401 623 aaKnown RBP14.88□□□□□ -0.03
CCNF-201ENST00000293968 TBCELQ5QJ74 424 aa14.88□□□□□ -0.03
CCNF-201ENST00000293968 NAPEPLDQ6IQ20 393 aa14.88□□□□□ -0.03
CCNF-201ENST00000293968 CEP97Q8IW35 865 aa14.88□□□□□ -0.03
CCNF-201ENST00000293968 CENPIQ92674 756 aaPredicted RBP14.88□□□□□ -0.03
CCNF-201ENST00000293968 ASB9Q96DX5 294 aa14.88□□□□□ -0.03
CCNF-201ENST00000293968 NXF3Q9H4D5 531 aaKnown RBP14.88□□□□□ -0.03
CCNF-201ENST00000293968 SPAG4Q9NPE6 437 aa14.88□□□□□ -0.03
CCNF-201ENST00000293968 PNPLA3Q9NST1 481 aa14.88□□□□□ -0.03
CCNF-201ENST00000293968 SFMBT1Q9UHJ3 866 aa14.88□□□□□ -0.03
CCNF-201ENST00000293968 CROTQ9UKG9 612 aa14.88□□□□□ -0.03
CCNF-201ENST00000293968 NR5A2O00482 541 aa14.87□□□□□ -0.03
CCNF-201ENST00000293968 LGALS2P05162 132 aa14.87□□□□□ -0.03
CCNF-201ENST00000293968 SLC35E2BP0CK96 405 aa14.87□□□□□ -0.03
CCNF-201ENST00000293968 RAB10P61026 200 aa14.87□□□□□ -0.03
CCNF-201ENST00000293968 CNSTQ6PJW8 725 aa14.87□□□□□ -0.03
CCNF-201ENST00000293968 WNT8BQ93098 351 aa14.87□□□□□ -0.03
CCNF-201ENST00000293968 FSD1LQ9BXM9 530 aa14.87□□□□□ -0.03
CCNF-201ENST00000293968 RBM38Q9H0Z9 239 aaKnown RBP14.87□□□□□ -0.03
CCNF-201ENST00000293968 ANKRD6Q9Y2G4 727 aa14.87□□□□□ -0.03
CCNF-201ENST00000293968 CSADQ9Y600 493 aa14.87□□□□□ -0.03
CCNF-201ENST00000293968 USP3Q9Y6I4 520 aa14.87□□□□□ -0.03
CCNF-201ENST00000293968 C9IYK1 514 aa14.87□□□□□ -0.03
CCNF-201ENST00000293968 SUPT7LO94864 414 aa14.87□□□□□ -0.03
CCNF-201ENST00000293968 GJA9P57773 515 aa14.87□□□□□ -0.03
CCNF-201ENST00000293968 MAPRE2Q15555 327 aa14.87□□□□□ -0.03
CCNF-201ENST00000293968 ESRP1Q6NXG1 681 aaKnown RBP14.87□□□□□ -0.03
CCNF-201ENST00000293968 POTEHQ6S545 545 aa14.87□□□□□ -0.03
CCNF-201ENST00000293968 CANT1Q8WVQ1 401 aa14.87□□□□□ -0.03
CCNF-201ENST00000293968 CNOT6Q9ULM6 557 aaKnown RBP14.87□□□□□ -0.03
CCNF-201ENST00000293968 PRORSD1PA6NEY8 169 aa14.87□□□□□ -0.03
CCNF-201ENST00000293968 TADA2AO75478 443 aa14.87□□□□□ -0.03
CCNF-201ENST00000293968 BEST1O76090 585 aa14.87□□□□□ -0.03
CCNF-201ENST00000293968 RECQL4O94761 1208 aa14.87□□□□□ -0.03
CCNF-201ENST00000293968 SLC4A1P02730 911 aa14.87□□□□□ -0.03
CCNF-201ENST00000293968 ZNF26P17031 533 aaPredicted RBP14.87□□□□□ -0.03
CCNF-201ENST00000293968 NOS2P35228 1153 aa14.87□□□□□ -0.03
CCNF-201ENST00000293968 NPY2RP49146 381 aa14.87□□□□□ -0.03
CCNF-201ENST00000293968 ITKQ08881 620 aa14.87□□□□□ -0.03
CCNF-201ENST00000293968 CLEC14AQ86T13 490 aa14.87□□□□□ -0.03
CCNF-201ENST00000293968 LSMEM2Q8N112 164 aa14.87□□□□□ -0.03
CCNF-201ENST00000293968 NUP93Q8N1F7 819 aa14.87□□□□□ -0.03
CCNF-201ENST00000293968 CBR4Q8N4T8 237 aa14.87□□□□□ -0.03
CCNF-201ENST00000293968 NPWQ8N729 165 aa14.87□□□□□ -0.03
CCNF-201ENST00000293968 HEXDCQ8WVB3 486 aa14.87□□□□□ -0.03
CCNF-201ENST00000293968 HDAC11Q96DB2 347 aa14.87□□□□□ -0.03
CCNF-201ENST00000293968 ULBP1Q9BZM6 244 aa14.87□□□□□ -0.03
CCNF-201ENST00000293968 TRIM8Q9BZR9 551 aa14.87□□□□□ -0.03
CCNF-201ENST00000293968 MRPL46Q9H2W6 279 aaKnown RBP14.87□□□□□ -0.03
CCNF-201ENST00000293968 MRPL40Q9NQ50 206 aaKnown RBP14.87□□□□□ -0.03
CCNF-201ENST00000293968 PIM2Q9P1W9 311 aa14.87□□□□□ -0.03
CCNF-201ENST00000293968 EBF1Q9UH73 591 aa14.87□□□□□ -0.03
CCNF-201ENST00000293968 SDHDO14521 159 aa14.86□□□□□ -0.03
CCNF-201ENST00000293968 ACOT8O14734 319 aa14.86□□□□□ -0.03
CCNF-201ENST00000293968 CCDC166P0CW27 439 aa14.86□□□□□ -0.03
CCNF-201ENST00000293968 YBX3P16989 372 aaKnown RBP eCLIP14.86□□□□□ -0.03
CCNF-201ENST00000293968 YWHAQP27348 245 aa14.86□□□□□ -0.03
CCNF-201ENST00000293968 ADRA1BP35368 520 aa14.86□□□□□ -0.03
CCNF-201ENST00000293968 TAS2R39P59534 338 aa14.86□□□□□ -0.03
CCNF-201ENST00000293968 KYAT1Q16773 422 aa14.86□□□□□ -0.03
CCNF-201ENST00000293968 TXNDC5Q8NBS9 432 aaKnown RBP14.86□□□□□ -0.03
CCNF-201ENST00000293968 OSMRQ99650 979 aa14.86□□□□□ -0.03
CCNF-201ENST00000293968 ELP3Q9H9T3 547 aa14.86□□□□□ -0.03
CCNF-201ENST00000293968 CLK4Q9HAZ1 481 aaKnown RBP14.86□□□□□ -0.03
CCNF-201ENST00000293968 SLC2A6Q9UGQ3 507 aa14.86□□□□□ -0.03
CCNF-201ENST00000293968 DOLKQ9UPQ8 538 aa14.86□□□□□ -0.03
CCNF-201ENST00000293968 PCDHGA7Q9Y5G6 932 aa14.86□□□□□ -0.03
CCNF-201ENST00000293968 TIMM13Q9Y5L4 95 aaPredicted RBP14.86□□□□□ -0.03
CCNF-201ENST00000293968 ZNF23P17027 643 aa14.86□□□□□ -0.03
CCNF-201ENST00000293968 PSMD7P51665 324 aa14.86□□□□□ -0.03
CCNF-201ENST00000293968 APOFQ13790 326 aa14.86□□□□□ -0.03
CCNF-201ENST00000293968 ARL13BQ3SXY8 428 aa14.86□□□□□ -0.03
CCNF-201ENST00000293968 C9orf57Q5W0N0 161 aa14.86□□□□□ -0.03
CCNF-201ENST00000293968 FAM110BQ8TC76 370 aa14.86□□□□□ -0.03
CCNF-201ENST00000293968 GPR22Q99680 433 aa14.86□□□□□ -0.03
CCNF-201ENST00000293968 UNC93B1Q9H1C4 597 aa14.86□□□□□ -0.03
CCNF-201ENST00000293968 PIF1Q9H611 641 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms