RNA–Protein interactions for RNA: ENST00000287701.14

HMBOX1-201, Transcript of homeobox containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMBOX1, Length 3,184 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-201ENST00000287701 SPDYE6P0CI01 402 aa9.96□□□□□ -0.82
HMBOX1-201ENST00000287701 BMP4P12644 408 aa9.96□□□□□ -0.82
HMBOX1-201ENST00000287701 FASP25445 335 aa9.96□□□□□ -0.82
HMBOX1-201ENST00000287701 CDH5P33151 784 aaPredicted RBP9.96□□□□□ -0.82
HMBOX1-201ENST00000287701 ATN1P54259 1190 aaPredicted RBP9.96□□□□□ -0.82
HMBOX1-201ENST00000287701 COPZ1P61923 177 aa9.96□□□□□ -0.82
HMBOX1-201ENST00000287701 DYNLT1P63172 113 aa9.96□□□□□ -0.82
HMBOX1-201ENST00000287701 FCHO2Q0JRZ9 810 aa9.96□□□□□ -0.82
HMBOX1-201ENST00000287701 PRKAA1Q13131 559 aa9.96□□□□□ -0.82
HMBOX1-201ENST00000287701 CTF1Q16619 201 aa9.96□□□□□ -0.82
HMBOX1-201ENST00000287701 SHROOM1Q2M3G4 852 aaPredicted RBP9.96□□□□□ -0.82
HMBOX1-201ENST00000287701 SPDYE2Q495Y8 402 aa9.96□□□□□ -0.82
HMBOX1-201ENST00000287701 BRDTQ58F21 947 aaPredicted RBP9.96□□□□□ -0.82
HMBOX1-201ENST00000287701 WDR44Q5JSH3 913 aa9.96□□□□□ -0.82
HMBOX1-201ENST00000287701 DCUN1D2Q6PH85 259 aa9.96□□□□□ -0.82
HMBOX1-201ENST00000287701 PADI6Q6TGC4 694 aa9.96□□□□□ -0.82
HMBOX1-201ENST00000287701 RNF19BQ6ZMZ0 732 aa9.96□□□□□ -0.82
HMBOX1-201ENST00000287701 SPATA18Q8TC71 538 aa9.96□□□□□ -0.82
HMBOX1-201ENST00000287701 DCAF4Q8WV16 495 aa9.96□□□□□ -0.82
HMBOX1-201ENST00000287701 CEP295NLQ96MC4 621 aa9.96□□□□□ -0.82
HMBOX1-201ENST00000287701 FUNDC2Q9BWH2 189 aa9.96□□□□□ -0.82
HMBOX1-201ENST00000287701 PCDHAC1Q9H158 963 aa9.96□□□□□ -0.82
HMBOX1-201ENST00000287701 ARHGAP28Q9P2N2 729 aa9.96□□□□□ -0.82
HMBOX1-201ENST00000287701 SLC9A2Q9UBY0 812 aa9.96□□□□□ -0.82
HMBOX1-201ENST00000287701 MAU2Q9Y6X3 613 aa9.96□□□□□ -0.82
HMBOX1-201ENST00000287701 C16orf96A6NNT2 1141 aa9.96□□□□□ -0.82
HMBOX1-201ENST00000287701 ZBTB39O15060 712 aa9.96□□□□□ -0.82
HMBOX1-201ENST00000287701 UPK1BO75841 260 aa9.96□□□□□ -0.82
HMBOX1-201ENST00000287701 KRT8P05787 483 aa9.96□□□□□ -0.82
HMBOX1-201ENST00000287701 RRM2P31350 389 aa9.96□□□□□ -0.82
HMBOX1-201ENST00000287701 VAC14Q08AM6 782 aa9.96□□□□□ -0.82
HMBOX1-201ENST00000287701 INPP5AQ14642 412 aa9.96□□□□□ -0.82
HMBOX1-201ENST00000287701 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.96□□□□□ -0.82
HMBOX1-201ENST00000287701 SLCO6A1Q86UG4 719 aa9.96□□□□□ -0.82
HMBOX1-201ENST00000287701 FAM156AQ8NDB6 213 aa9.96□□□□□ -0.82
HMBOX1-201ENST00000287701 RHOXF1Q8NHV9 184 aa9.96□□□□□ -0.82
HMBOX1-201ENST00000287701 POMGNT1Q8WZA1 660 aa9.96□□□□□ -0.82
HMBOX1-201ENST00000287701 MARVELD3Q96A59 401 aa9.96□□□□□ -0.82
HMBOX1-201ENST00000287701 FBXL20Q96IG2 436 aa9.96□□□□□ -0.82
HMBOX1-201ENST00000287701 MTMR12Q9C0I1 747 aa9.96□□□□□ -0.82
HMBOX1-201ENST00000287701 DNAI2Q9GZS0 605 aa9.96□□□□□ -0.82
HMBOX1-201ENST00000287701 PAK1IP1Q9NWT1 392 aaPredicted RBP9.96□□□□□ -0.82
HMBOX1-201ENST00000287701 ZNF229Q9UJW7 825 aa9.96□□□□□ -0.82
HMBOX1-201ENST00000287701 NAALAD2Q9Y3Q0 740 aa9.96□□□□□ -0.82
HMBOX1-201ENST00000287701 COPG1Q9Y678 874 aaKnown RBP9.96□□□□□ -0.82
HMBOX1-201ENST00000287701 BCLAF3A2AJT9 711 aaKnown RBP9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 PRORSD1PA6NEY8 169 aa9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 A6NL46 340 aa9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 TAF4O00268 1085 aa9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 HAT1O14929 419 aa9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 SEC24DO94855 1032 aaPredicted RBP9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 MYCP01106 439 aaPredicted RBP9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 APOA4P06727 396 aa9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 CFHP08603 1231 aa9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 NAGAP17050 411 aa9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 IL10P22301 178 aa9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 TBXAS1P24557 533 aaPredicted RBP9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 EIF2DP41214 584 aaKnown RBP9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 GARSP41250 739 aaKnown RBP9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 ZNF132P52740 706 aa9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 PPP2R2BQ00005 443 aa9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 ZNF534Q76KX8 674 aa9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 RFX6Q8HWS3 928 aa9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 MAP4K3Q8IVH8 894 aa9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 LGI2Q8N0V4 545 aa9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 PELI3Q8N2H9 469 aa9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 BPIFB6Q8NFQ5 453 aa9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 GIPC2Q8TF65 315 aa9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 NPAS2Q99743 824 aa9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 AMNQ9BXJ7 453 aa9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 NOL6Q9H6R4 1146 aaKnown RBP9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 CACNA2D2Q9NY47 1150 aa9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 WRAP73Q9P2S5 460 aaPredicted RBP9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 UBA2Q9UBT2 640 aaPredicted RBP9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 TAF1P21675 1872 aa9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 POLR1CO15160 346 aaPredicted RBP9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 SHOXO15266 292 aa9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 MAN1A2O60476 641 aa9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 SYNCRIPO60506 623 aaKnown RBP9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 MYL3P08590 195 aa9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 MLNP12872 115 aa9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 TCN1P20061 433 aaPredicted RBP9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 SSTR3P32745 418 aaPredicted RBP9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 ATXN3P54252 364 aaPredicted RBP9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 CUL2Q13617 745 aa9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 TFDP2Q14188 446 aa9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 NAPRTQ6XQN6 538 aa9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 ERO1BQ86YB8 467 aa9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 LYSMD2Q8IV50 215 aa9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 CCDC28AQ8IWP9 274 aa9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 HACE1Q8IYU2 909 aa9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 CANT1Q8WVQ1 401 aa9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 CYGBQ8WWM9 190 aa9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 HDAC2Q92769 488 aaKnown RBP9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 AIFM2Q9BRQ8 373 aa9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 RPAP3Q9H6T3 665 aaPredicted RBP9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 WDR55Q9H6Y2 383 aaPredicted RBP9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.95□□□□□ -0.821e-6■■■■□ 26.1
HMBOX1-201ENST00000287701 PI4KBQ9UBF8 816 aa9.95□□□□□ -0.82
HMBOX1-201ENST00000287701 ZNF221Q9UK13 617 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms