RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 POU6F1Q14863 301 aa22.36■■□□□ 1.17
CCDC7-201ENST00000277657 SLC1A5Q15758 541 aa22.36■■□□□ 1.17
CCDC7-201ENST00000277657 RNF219Q5W0B1 726 aaPredicted RBP22.36■■□□□ 1.17
CCDC7-201ENST00000277657 BBS5Q8N3I7 341 aa22.36■■□□□ 1.17
CCDC7-201ENST00000277657 CPXM2Q8N436 756 aa22.36■■□□□ 1.17
CCDC7-201ENST00000277657 GDAP1Q8TB36 358 aa22.36■■□□□ 1.17
CCDC7-201ENST00000277657 APOPT1Q96IL0 206 aa22.36■■□□□ 1.17
CCDC7-201ENST00000277657 SEMA3CQ99985 751 aa22.36■■□□□ 1.17
CCDC7-201ENST00000277657 HAUS2Q9NVX0 235 aa22.36■■□□□ 1.17
CCDC7-201ENST00000277657 TCAF1Q9Y4C2 921 aa22.36■■□□□ 1.17
CCDC7-201ENST00000277657 DOCK6Q96HP0 2047 aa22.35■■□□□ 1.17
CCDC7-201ENST00000277657 LOC285095A0A1B0GVY8 99 aa22.35■■□□□ 1.17
CCDC7-201ENST00000277657 TTC24A2A3L6 582 aaPredicted RBP22.35■■□□□ 1.17
CCDC7-201ENST00000277657 CCNFP41002 786 aa22.35■■□□□ 1.17
CCDC7-201ENST00000277657 NUMBP49757 651 aa22.35■■□□□ 1.17
CCDC7-201ENST00000277657 NEK3P51956 506 aa22.35■■□□□ 1.17
CCDC7-201ENST00000277657 IL9RQ01113 521 aa22.35■■□□□ 1.17
CCDC7-201ENST00000277657 MSLNQ13421 630 aaPredicted RBP22.35■■□□□ 1.17
CCDC7-201ENST00000277657 TEDDM1Q5T9Z0 273 aa22.35■■□□□ 1.17
CCDC7-201ENST00000277657 FOXR1Q6PIV2 292 aa22.35■■□□□ 1.17
CCDC7-201ENST00000277657 KDELC2Q7Z4H8 507 aa22.35■■□□□ 1.17
CCDC7-201ENST00000277657 PPHLN1Q8NEY8 458 aaKnown RBP22.35■■□□□ 1.17
CCDC7-201ENST00000277657 SHKBP1Q8TBC3 707 aa22.35■■□□□ 1.17
CCDC7-201ENST00000277657 MAGEB18Q96M61 343 aa22.35■■□□□ 1.17
CCDC7-201ENST00000277657 CPNE1Q99829 537 aa22.35■■□□□ 1.17
CCDC7-201ENST00000277657 ARHGAP26Q9UNA1 814 aa22.35■■□□□ 1.17
CCDC7-201ENST00000277657 SH3BP1Q9Y3L3 701 aa22.35■■□□□ 1.17
CCDC7-201ENST00000277657 ACTL7AQ9Y615 435 aa22.35■■□□□ 1.17
CCDC7-201ENST00000277657 HELZP42694 1942 aaKnown RBP22.35■■□□□ 1.17
CCDC7-201ENST00000277657 TYW5A2RUC4 315 aaKnown RBP22.34■■□□□ 1.17
CCDC7-201ENST00000277657 GRXCR1A8MXD5 290 aa22.34■■□□□ 1.17
CCDC7-201ENST00000277657 CLASP2O75122 1294 aaKnown RBP22.34■■□□□ 1.17
CCDC7-201ENST00000277657 LUC7L3O95232 432 aaKnown RBP22.34■■□□□ 1.17
CCDC7-201ENST00000277657 ADRA1DP25100 572 aa22.34■■□□□ 1.17
CCDC7-201ENST00000277657 GP5P40197 560 aa22.34■■□□□ 1.17
CCDC7-201ENST00000277657 SLC14A2Q15849 920 aa22.34■■□□□ 1.17
CCDC7-201ENST00000277657 GLIPR1L2Q4G1C9 344 aa22.34■■□□□ 1.17
CCDC7-201ENST00000277657 FSCBQ5H9T9 825 aa22.34■■□□□ 1.17
CCDC7-201ENST00000277657 C9orf50Q5SZB4 431 aa22.34■■□□□ 1.17
CCDC7-201ENST00000277657 MROH9Q5TGP6 573 aa22.34■■□□□ 1.17
CCDC7-201ENST00000277657 FAM109BQ6ICB4 259 aaPredicted RBP22.34■■□□□ 1.17
CCDC7-201ENST00000277657 TAX1BP1Q86VP1 789 aa22.34■■□□□ 1.17
CCDC7-201ENST00000277657 KCNMB4Q86W47 210 aa22.34■■□□□ 1.17
CCDC7-201ENST00000277657 TCP10LQ8TDR4 215 aa22.34■■□□□ 1.17
CCDC7-201ENST00000277657 FAM107BQ9H098 131 aa22.34■■□□□ 1.17
CCDC7-201ENST00000277657 MUC3BQ9H195 1237 aa22.34■■□□□ 1.17
CCDC7-201ENST00000277657 MKS1Q9NXB0 559 aa22.34■■□□□ 1.17
CCDC7-201ENST00000277657 OR51B4Q9Y5P0 310 aa22.34■■□□□ 1.17
CCDC7-201ENST00000277657 H0Y626 953 aa22.34■■□□□ 1.17
CCDC7-201ENST00000277657 MOSPD3O75425 235 aa22.34■■□□□ 1.17
CCDC7-201ENST00000277657 PTPN2P17706 415 aa22.34■■□□□ 1.17
CCDC7-201ENST00000277657 DDX6P26196 483 aaKnown RBP eCLIP22.34■■□□□ 1.17
CCDC7-201ENST00000277657 BBS7Q8IWZ6 715 aa22.34■■□□□ 1.17
CCDC7-201ENST00000277657 LRRC34Q8IZ02 419 aa22.34■■□□□ 1.17
CCDC7-201ENST00000277657 CARNMT1Q8N4J0 409 aa22.34■■□□□ 1.17
CCDC7-201ENST00000277657 RANBP9Q96S59 729 aa22.34■■□□□ 1.17
CCDC7-201ENST00000277657 C20orf96Q9NUD7 363 aaPredicted RBP22.34■■□□□ 1.17
CCDC7-201ENST00000277657 DNMT3BQ9UBC3 853 aaKnown RBP22.34■■□□□ 1.17
CCDC7-201ENST00000277657 CBX4O00257 560 aa22.33■■□□□ 1.17
CCDC7-201ENST00000277657 LEFTY2O00292 366 aa22.33■■□□□ 1.17
CCDC7-201ENST00000277657 GJB3O75712 270 aa22.33■■□□□ 1.17
CCDC7-201ENST00000277657 ZMPSTE24O75844 475 aa22.33■■□□□ 1.17
CCDC7-201ENST00000277657 EPOP01588 193 aa22.33■■□□□ 1.17
CCDC7-201ENST00000277657 CA3P07451 260 aa22.33■■□□□ 1.17
CCDC7-201ENST00000277657 HNRNPA1P09651 372 aaKnown RBP eCLIP22.33■■□□□ 1.17
CCDC7-201ENST00000277657 EPCAMP16422 314 aa22.33■■□□□ 1.17
CCDC7-201ENST00000277657 CCT5P48643 541 aa22.33■■□□□ 1.17
CCDC7-201ENST00000277657 SERPINH1P50454 418 aaKnown RBP22.33■■□□□ 1.17
CCDC7-201ENST00000277657 QPCTQ16769 361 aa22.33■■□□□ 1.17
CCDC7-201ENST00000277657 HSP90AA5PQ58FG0 334 aa22.33■■□□□ 1.17
CCDC7-201ENST00000277657 GRTP1Q5TC63 336 aa22.33■■□□□ 1.17
CCDC7-201ENST00000277657 PDPK2PQ6A1A2 396 aa22.33■■□□□ 1.17
CCDC7-201ENST00000277657 SLC25A41Q8N5S1 370 aa22.33■■□□□ 1.17
CCDC7-201ENST00000277657 TCEAL4Q96EI5 215 aa22.33■■□□□ 1.17
CCDC7-201ENST00000277657 FEM1CQ96JP0 617 aa22.33■■□□□ 1.17
CCDC7-201ENST00000277657 FEM1AQ9BSK4 669 aa22.33■■□□□ 1.17
CCDC7-201ENST00000277657 CINPQ9BW66 212 aaPredicted RBP22.33■■□□□ 1.17
CCDC7-201ENST00000277657 TREX1Q9NSU2 369 aa22.33■■□□□ 1.17
CCDC7-201ENST00000277657 GRID1Q9ULK0 1009 aa22.33■■□□□ 1.17
CCDC7-201ENST00000277657 MYO7AQ13402 2215 aa22.33■■□□□ 1.16
CCDC7-201ENST00000277657 GBF1Q92538 1859 aa22.32■■□□□ 1.16
CCDC7-201ENST00000277657 ATXN1LP0C7T5 689 aaKnown RBP22.32■■□□□ 1.16
CCDC7-201ENST00000277657 CR2P20023 1033 aa22.32■■□□□ 1.16
CCDC7-201ENST00000277657 ARF5P84085 180 aa22.32■■□□□ 1.16
CCDC7-201ENST00000277657 CYTH1Q15438 398 aa22.32■■□□□ 1.16
CCDC7-201ENST00000277657 MPP7Q5T2T1 576 aa22.32■■□□□ 1.16
CCDC7-201ENST00000277657 RNF43Q68DV7 783 aa22.32■■□□□ 1.16
CCDC7-201ENST00000277657 PDE12Q6L8Q7 609 aaKnown RBP22.32■■□□□ 1.16
CCDC7-201ENST00000277657 LVRNQ6Q4G3 990 aa22.32■■□□□ 1.16
CCDC7-201ENST00000277657 CPLX4Q7Z7G2 160 aa22.32■■□□□ 1.16
CCDC7-201ENST00000277657 SAMD11Q96NU1 681 aa22.32■■□□□ 1.16
CCDC7-201ENST00000277657 AGAP2Q99490 1192 aa22.32■■□□□ 1.16
CCDC7-201ENST00000277657 MCMBPQ9BTE3 642 aa22.32■■□□□ 1.16
CCDC7-201ENST00000277657 PRKD2Q9BZL6 878 aa22.32■■□□□ 1.16
CCDC7-201ENST00000277657 TXNDC16Q9P2K2 825 aa22.32■■□□□ 1.16
CCDC7-201ENST00000277657 NOTCH4Q99466 2003 aa22.32■■□□□ 1.16
CCDC7-201ENST00000277657 TCP11X1B4DZS4 312 aa22.32■■□□□ 1.16
CCDC7-201ENST00000277657 CD160O95971 181 aa22.32■■□□□ 1.16
CCDC7-201ENST00000277657 RHOP08100 348 aa22.32■■□□□ 1.16
CCDC7-201ENST00000277657 ITGA2BP08514 1039 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms