RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 HGFP14210 728 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 UGT1A6P19224 532 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 UGT1A1P22309 533 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 UGT1A4P22310 534 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 UGT1A3P35503 534 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 UGT1A5P35504 534 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 RAB10P61026 200 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 TNK2Q07912 1038 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 PFKFB4Q16877 469 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 SH3D19Q5HYK7 790 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 THEM5Q8N1Q8 247 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 ZFP28Q8NHY6 868 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 DDX1Q92499 740 aaKnown RBP16.38■□□□□ 0.21
SREBF1-201ENST00000261646 HTRA1Q92743 480 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 DEPDC7Q96QD5 511 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 UNC93B1Q9H1C4 597 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 HPS4Q9NQG7 708 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 USE1Q9NZ43 259 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 PCDHGC3Q9UN70 934 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 CYP2C9P11712 490 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 YBX3P16989 372 aaKnown RBP eCLIP16.38■□□□□ 0.214e-8■■□□□ 14.1
SREBF1-201ENST00000261646 S100A1P23297 94 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 MYLK3Q32MK0 819 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 ANKS6Q68DC2 871 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 CRTC3Q6UUV7 619 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 SZRD1Q7Z422 152 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 SLCO6A1Q86UG4 719 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 SLC4A11Q8NBS3 891 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 FAM120BQ96EK7 910 aaKnown RBP16.38■□□□□ 0.21
SREBF1-201ENST00000261646 RGS18Q9NS28 235 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 TBC1D13Q9NVG8 400 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 PCDHGB4Q9UN71 923 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 RAD54BQ9Y620 910 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 LOC100506127A0A0U1RQW1 187 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 BCLAF3A2AJT9 711 aaKnown RBP16.38■□□□□ 0.21
SREBF1-201ENST00000261646 YDJCA8MPS7 323 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 HK2P52789 917 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 GNA12Q03113 381 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 MYBPC3Q14896 1274 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 TCEAL1Q15170 157 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 SPANXN2Q5MJ10 180 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 FSTL4Q6MZW2 842 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 SCIMPQ6UWF3 145 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 PPP1R2P1Q96PQ5 205 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 LHX5Q9H2C1 402 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 ASB7Q9H672 318 aa16.38■□□□□ 0.21
SREBF1-201ENST00000261646 FAM32AQ9Y421 112 aaKnown RBP16.38■□□□□ 0.21
SREBF1-201ENST00000261646 GPC6Q9Y625 555 aaPredicted RBP16.38■□□□□ 0.21
SREBF1-201ENST00000261646 PMM2O15305 246 aa16.37■□□□□ 0.21
SREBF1-201ENST00000261646 CCR1P32246 355 aa16.37■□□□□ 0.21
SREBF1-201ENST00000261646 RAD51Q06609 339 aa16.37■□□□□ 0.21
SREBF1-201ENST00000261646 ZDHHC17Q8IUH5 632 aa16.37■□□□□ 0.21
SREBF1-201ENST00000261646 FBXO39Q8N4B4 442 aa16.37■□□□□ 0.21
SREBF1-201ENST00000261646 TMEM134Q9H6X4 195 aa16.37■□□□□ 0.21
SREBF1-201ENST00000261646 UBQLN1Q9UMX0 589 aaKnown RBP16.37■□□□□ 0.21
SREBF1-201ENST00000261646 TYW5A2RUC4 315 aaKnown RBP16.37■□□□□ 0.21
SREBF1-201ENST00000261646 TRIM24O15164 1050 aa16.37■□□□□ 0.21
SREBF1-201ENST00000261646 F9P00740 461 aa16.37■□□□□ 0.21
SREBF1-201ENST00000261646 SOX6P35712 828 aa16.37■□□□□ 0.21
SREBF1-201ENST00000261646 CSTF3Q12996 717 aaKnown RBP16.37■□□□□ 0.21
SREBF1-201ENST00000261646 SV2CQ496J9 727 aa16.37■□□□□ 0.21
SREBF1-201ENST00000261646 EEF1DP3Q658K8 133 aa16.37■□□□□ 0.21
SREBF1-201ENST00000261646 NT5MQ9NPB1 228 aa16.37■□□□□ 0.21
SREBF1-201ENST00000261646 SEMA4BQ9NPR2 832 aaPredicted RBP16.37■□□□□ 0.21
SREBF1-201ENST00000261646 LMCD1Q9NZU5 365 aa16.37■□□□□ 0.21
SREBF1-201ENST00000261646 EIF3LQ9Y262 564 aaKnown RBP16.37■□□□□ 0.21
SREBF1-201ENST00000261646 BTRCQ9Y297 605 aa16.37■□□□□ 0.21
SREBF1-201ENST00000261646 KCTD8Q6ZWB6 473 aa16.37■□□□□ 0.21
SREBF1-201ENST00000261646 MRPL57Q9BQC6 102 aaKnown RBP16.37■□□□□ 0.21
SREBF1-201ENST00000261646 UGT2B28Q9BY64 529 aa16.37■□□□□ 0.21
SREBF1-201ENST00000261646 SIRPGQ9P1W8 387 aa16.37■□□□□ 0.21
SREBF1-201ENST00000261646 ARHGAP28Q9P2N2 729 aa16.37■□□□□ 0.21
SREBF1-201ENST00000261646 TRMT6Q9UJA5 497 aaKnown RBP16.37■□□□□ 0.21
SREBF1-201ENST00000261646 TOR1BO14657 336 aa16.36■□□□□ 0.21
SREBF1-201ENST00000261646 MAGEB3O15480 346 aa16.36■□□□□ 0.21
SREBF1-201ENST00000261646 LTFP02788 710 aa16.36■□□□□ 0.21
SREBF1-201ENST00000261646 GRIK1P39086 918 aa16.36■□□□□ 0.21
SREBF1-201ENST00000261646 LRRC74AQ0VAA2 488 aa16.36■□□□□ 0.21
SREBF1-201ENST00000261646 RBM12BQ8IXT5 1001 aaKnown RBP16.36■□□□□ 0.21
SREBF1-201ENST00000261646 RDH11Q8TC12 318 aa16.36■□□□□ 0.21
SREBF1-201ENST00000261646 SEPT8Q92599 483 aa16.36■□□□□ 0.21
SREBF1-201ENST00000261646 TAMM41Q96BW9 452 aa16.36■□□□□ 0.21
SREBF1-201ENST00000261646 TLE6Q9H808 572 aa16.36■□□□□ 0.21
SREBF1-201ENST00000261646 FANCEQ9HB96 536 aa16.36■□□□□ 0.21
SREBF1-201ENST00000261646 POPDC2Q9HBU9 364 aa16.36■□□□□ 0.21
SREBF1-201ENST00000261646 GIN1Q9NXP7 522 aa16.36■□□□□ 0.21
SREBF1-201ENST00000261646 SLC30A1Q9Y6M5 507 aa16.36■□□□□ 0.21
SREBF1-201ENST00000261646 PDLIM1O00151 329 aa16.36■□□□□ 0.21
SREBF1-201ENST00000261646 ATG7O95352 703 aa16.36■□□□□ 0.21
SREBF1-201ENST00000261646 F7P08709 466 aaPredicted RBP16.36■□□□□ 0.21
SREBF1-201ENST00000261646 LTA4HP09960 611 aaKnown RBP16.36■□□□□ 0.21
SREBF1-201ENST00000261646 ZRANB3Q5FWF4 1079 aa16.36■□□□□ 0.21
SREBF1-201ENST00000261646 ARHGAP36Q6ZRI8 547 aa16.36■□□□□ 0.21
SREBF1-201ENST00000261646 PCDH19Q8TAB3 1148 aa16.36■□□□□ 0.21
SREBF1-201ENST00000261646 OMA1Q96E52 524 aa16.36■□□□□ 0.21
SREBF1-201ENST00000261646 CSPG4P5Q96PW8 444 aa16.36■□□□□ 0.21
SREBF1-201ENST00000261646 TRIM39Q9HCM9 518 aa16.36■□□□□ 0.21
SREBF1-201ENST00000261646 CHRAC1Q9NRG0 131 aa16.36■□□□□ 0.21
SREBF1-201ENST00000261646 PLK2Q9NYY3 685 aa16.36■□□□□ 0.21
SREBF1-201ENST00000261646 FBXO5Q9UKT4 447 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms