RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 ADAM17P78536 824 aa12.47□□□□□ -0.41
USP30-201ENST00000257548 CAPSQ13938 189 aa12.47□□□□□ -0.41
USP30-201ENST00000257548 TGFBIQ15582 683 aa12.47□□□□□ -0.41
USP30-201ENST00000257548 LIPMQ5VYY2 423 aa12.47□□□□□ -0.41
USP30-201ENST00000257548 FAM35AQ86V20 835 aa12.47□□□□□ -0.41
USP30-201ENST00000257548 SYTL1Q8IYJ3 562 aa12.47□□□□□ -0.41
USP30-201ENST00000257548 APBB2Q92870 758 aa12.47□□□□□ -0.41
USP30-201ENST00000257548 EXD2Q9NVH0 621 aa12.47□□□□□ -0.41
USP30-201ENST00000257548 ZNF70Q9UC06 446 aaPredicted RBP12.47□□□□□ -0.41
USP30-201ENST00000257548 MYO1GB0I1T2 1018 aa12.47□□□□□ -0.41
USP30-201ENST00000257548 H0Y626 953 aa12.47□□□□□ -0.41
USP30-201ENST00000257548 PSMD11O00231 422 aa12.47□□□□□ -0.41
USP30-201ENST00000257548 TRIM16O95361 564 aa12.47□□□□□ -0.41
USP30-201ENST00000257548 JUNP05412 331 aaKnown RBP12.47□□□□□ -0.41
USP30-201ENST00000257548 VDRP11473 427 aa12.47□□□□□ -0.41
USP30-201ENST00000257548 PRKCHP24723 683 aa12.47□□□□□ -0.41
USP30-201ENST00000257548 EFNA5P52803 228 aa12.47□□□□□ -0.41
USP30-201ENST00000257548 CACNB2Q08289 660 aaPredicted RBP12.47□□□□□ -0.41
USP30-201ENST00000257548 CHSY3Q70JA7 882 aa12.47□□□□□ -0.41
USP30-201ENST00000257548 NT5DC4Q86YG4 428 aa12.47□□□□□ -0.41
USP30-201ENST00000257548 TMEM192Q8IY95 271 aa12.47□□□□□ -0.41
USP30-201ENST00000257548 FSTL5Q8N475 847 aaPredicted RBP12.47□□□□□ -0.41
USP30-201ENST00000257548 DHRS4Q9BTZ2 278 aa12.47□□□□□ -0.41
USP30-201ENST00000257548 EIF2AQ9BY44 585 aaKnown RBP12.47□□□□□ -0.41
USP30-201ENST00000257548 RERGLQ9H628 205 aa12.47□□□□□ -0.41
USP30-201ENST00000257548 EML4Q9HC35 981 aaKnown RBP12.47□□□□□ -0.41
USP30-201ENST00000257548 TRIM39Q9HCM9 518 aa12.47□□□□□ -0.41
USP30-201ENST00000257548 ZNF277Q9NRM2 450 aaPredicted RBP12.47□□□□□ -0.41
USP30-201ENST00000257548 VPS45Q9NRW7 570 aa12.47□□□□□ -0.41
USP30-201ENST00000257548 UTP6Q9NYH9 597 aaKnown RBP12.47□□□□□ -0.41
USP30-201ENST00000257548 ARHGAP28Q9P2N2 729 aa12.47□□□□□ -0.41
USP30-201ENST00000257548 ARAP2Q8WZ64 1704 aa12.47□□□□□ -0.41
USP30-201ENST00000257548 FAM159BA6NKW6 160 aa12.47□□□□□ -0.41
USP30-201ENST00000257548 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.47□□□□□ -0.41
USP30-201ENST00000257548 YWHAQP27348 245 aa12.47□□□□□ -0.41
USP30-201ENST00000257548 IL5RAQ01344 420 aa12.47□□□□□ -0.41
USP30-201ENST00000257548 GTF2H3Q13889 308 aa12.47□□□□□ -0.41
USP30-201ENST00000257548 PPP1R3AQ16821 1122 aa12.47□□□□□ -0.41
USP30-201ENST00000257548 MAVSQ7Z434 540 aa12.47□□□□□ -0.41
USP30-201ENST00000257548 DENND6AQ8IWF6 608 aa12.47□□□□□ -0.41
USP30-201ENST00000257548 CLEC4CQ8WTT0 213 aa12.47□□□□□ -0.41
USP30-201ENST00000257548 FBXL18Q96ME1 805 aa12.47□□□□□ -0.41
USP30-201ENST00000257548 THUMPD3Q9BV44 507 aaKnown RBP12.47□□□□□ -0.41
USP30-201ENST00000257548 ELOVL4Q9GZR5 314 aa12.47□□□□□ -0.41
USP30-201ENST00000257548 DNAI2Q9GZS0 605 aa12.47□□□□□ -0.41
USP30-201ENST00000257548 TUBGCP4Q9UGJ1 667 aa12.47□□□□□ -0.41
USP30-201ENST00000257548 CNOT6Q9ULM6 557 aaKnown RBP12.47□□□□□ -0.41
USP30-201ENST00000257548 SQORQ9Y6N5 450 aa12.47□□□□□ -0.41
USP30-201ENST00000257548 TBC1D4O60343 1298 aa12.46□□□□□ -0.41
USP30-201ENST00000257548 ATE1O95260 518 aa12.46□□□□□ -0.41
USP30-201ENST00000257548 NADKO95544 446 aaPredicted RBP12.46□□□□□ -0.41
USP30-201ENST00000257548 SUPT20HL2P0C7V6 817 aa12.46□□□□□ -0.41
USP30-201ENST00000257548 STAG3L1P0CL83 205 aa12.46□□□□□ -0.41
USP30-201ENST00000257548 CNTN2Q02246 1040 aa12.46□□□□□ -0.41
USP30-201ENST00000257548 MADCAM1Q13477 382 aa12.46□□□□□ -0.41
USP30-201ENST00000257548 SUPT20HL1Q3ZLR7 823 aa12.46□□□□□ -0.41
USP30-201ENST00000257548 ZNF280DQ6N043 979 aa12.46□□□□□ -0.41
USP30-201ENST00000257548 PMF1Q6P1K2 205 aa12.46□□□□□ -0.41
USP30-201ENST00000257548 CRTC3Q6UUV7 619 aa12.46□□□□□ -0.41
USP30-201ENST00000257548 EPGNQ6UW88 154 aa12.46□□□□□ -0.41
USP30-201ENST00000257548 POC5Q8NA72 575 aa12.46□□□□□ -0.41
USP30-201ENST00000257548 ZNF555Q8NEP9 628 aa12.46□□□□□ -0.41
USP30-201ENST00000257548 NCSTNQ92542 709 aa12.46□□□□□ -0.41
USP30-201ENST00000257548 TBCDQ9BTW9 1192 aa12.46□□□□□ -0.41
USP30-201ENST00000257548 C9orf16Q9BUW7 83 aa12.46□□□□□ -0.41
USP30-201ENST00000257548 ZNF696Q9H7X3 374 aa12.46□□□□□ -0.41
USP30-201ENST00000257548 HMG20AQ9NP66 347 aa12.46□□□□□ -0.41
USP30-201ENST00000257548 IGSF9Q9P2J2 1179 aa12.46□□□□□ -0.41
USP30-201ENST00000257548 NDUFAF1Q9Y375 327 aa12.46□□□□□ -0.41
USP30-201ENST00000257548 HTR3EA5X5Y0 456 aa12.46□□□□□ -0.41
USP30-201ENST00000257548 C16orf96A6NNT2 1141 aa12.46□□□□□ -0.41
USP30-201ENST00000257548 YDJCA8MPS7 323 aa12.46□□□□□ -0.41
USP30-201ENST00000257548 LACTBL1A8MY62 500 aa12.46□□□□□ -0.41
USP30-201ENST00000257548 ENTPD3O75355 529 aa12.46□□□□□ -0.41
USP30-201ENST00000257548 BMXP51813 675 aa12.46□□□□□ -0.41
USP30-201ENST00000257548 OXCT1P55809 520 aa12.46□□□□□ -0.41
USP30-201ENST00000257548 LAMTOR4Q0VGL1 99 aa12.46□□□□□ -0.41
USP30-201ENST00000257548 ZNF829Q3KNS6 432 aaPredicted RBP12.46□□□□□ -0.41
USP30-201ENST00000257548 METTL21CQ5VZV1 264 aa12.46□□□□□ -0.41
USP30-201ENST00000257548 ARHGAP17Q68EM7 881 aa12.46□□□□□ -0.41
USP30-201ENST00000257548 SLCO6A1Q86UG4 719 aa12.46□□□□□ -0.41
USP30-201ENST00000257548 PSD4Q8NDX1 1056 aa12.46□□□□□ -0.41
USP30-201ENST00000257548 CEP19Q96LK0 163 aa12.46□□□□□ -0.41
USP30-201ENST00000257548 KCTD14Q9BQ13 255 aaPredicted RBP12.46□□□□□ -0.41
USP30-201ENST00000257548 SLC25A23Q9BV35 468 aa12.46□□□□□ -0.41
USP30-201ENST00000257548 STRA6Q9BX79 667 aa12.46□□□□□ -0.41
USP30-201ENST00000257548 ROGDIQ9GZN7 287 aa12.46□□□□□ -0.41
USP30-201ENST00000257548 CDHR5Q9HBB8 845 aa12.46□□□□□ -0.41
USP30-201ENST00000257548 KLK14Q9P0G3 267 aa12.46□□□□□ -0.41
USP30-201ENST00000257548 CRYL1Q9Y2S2 319 aa12.46□□□□□ -0.41
USP30-201ENST00000257548 A0A087WZ62 844 aa12.46□□□□□ -0.42
USP30-201ENST00000257548 CCL22O00626 93 aa12.46□□□□□ -0.42
USP30-201ENST00000257548 COL6A2P12110 1019 aa12.46□□□□□ -0.42
USP30-201ENST00000257548 CXCR3P49682 368 aa12.46□□□□□ -0.42
USP30-201ENST00000257548 SLC10A2Q12908 348 aaPredicted RBP12.46□□□□□ -0.42
USP30-201ENST00000257548 ZBED5Q49AG3 693 aa12.46□□□□□ -0.42
USP30-201ENST00000257548 PGM2L1Q6PCE3 622 aa12.46□□□□□ -0.42
USP30-201ENST00000257548 LDB1Q86U70 411 aaPredicted RBP12.46□□□□□ -0.42
USP30-201ENST00000257548 FIBCD1Q8N539 461 aa12.46□□□□□ -0.42
USP30-201ENST00000257548 FBXO30Q8TB52 745 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms