RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 SMPD3Q9NY59 655 aaPredicted RBP13.29□□□□□ -0.28
PCDHGA3-201ENST00000253812 NKIRAS2Q9NYR9 191 aa13.29□□□□□ -0.28
PCDHGA3-201ENST00000253812 DDX3YO15523 660 aaKnown RBP13.29□□□□□ -0.28
PCDHGA3-201ENST00000253812 METTL18O95568 372 aa13.29□□□□□ -0.28
PCDHGA3-201ENST00000253812 SDC2P34741 201 aa13.29□□□□□ -0.28
PCDHGA3-201ENST00000253812 MAPK12P53778 367 aa13.29□□□□□ -0.28
PCDHGA3-201ENST00000253812 CACNB2Q08289 660 aaPredicted RBP13.29□□□□□ -0.28
PCDHGA3-201ENST00000253812 ARHGEF7Q14155 803 aa13.29□□□□□ -0.28
PCDHGA3-201ENST00000253812 FAAH2Q6GMR7 532 aa13.29□□□□□ -0.28
PCDHGA3-201ENST00000253812 TIGD7Q6NT04 549 aaPredicted RBP13.29□□□□□ -0.28
PCDHGA3-201ENST00000253812 MPP5Q8N3R9 675 aa13.29□□□□□ -0.28
PCDHGA3-201ENST00000253812 DNAJB14Q8TBM8 379 aa13.29□□□□□ -0.28
PCDHGA3-201ENST00000253812 HELQQ8TDG4 1101 aa13.29□□□□□ -0.28
PCDHGA3-201ENST00000253812 ZDHHC15Q96MV8 337 aa13.29□□□□□ -0.28
PCDHGA3-201ENST00000253812 POMKQ9H5K3 350 aa13.29□□□□□ -0.28
PCDHGA3-201ENST00000253812 ACSS3Q9H6R3 686 aa13.29□□□□□ -0.28
PCDHGA3-201ENST00000253812 EXD2Q9NVH0 621 aa13.29□□□□□ -0.28
PCDHGA3-201ENST00000253812 CUEDC1Q9NWM3 386 aaPredicted RBP13.29□□□□□ -0.28
PCDHGA3-201ENST00000253812 SEC22BO75396 215 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 KHDRBS3O75525 346 aaKnown RBP13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 IFI30P13284 250 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 PEX2P28328 305 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 PSEN1P49768 467 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 GOLGA7BQ2TAP0 167 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 NIPAL1Q6NVV3 410 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 FBXO42Q6P3S6 717 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 PTAR1Q7Z6K3 402 aaPredicted RBP13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 TMIEQ8NEW7 156 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 CLPBQ9H078 707 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 CDH19Q9H159 772 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 C17orf75Q9HAS0 396 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 CDH22Q9UJ99 828 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 ZC3H4Q9UPT8 1303 aaKnown RBP13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 WDR27A2RRH5 827 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 C19orf81C9J6K1 198 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 LRIG2O94898 1065 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 HNMTP50135 292 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 TOB1P50616 345 aaPredicted RBP13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 SLC7A2P52569 658 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 SEC23AQ15436 765 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 MFSD7Q6UXD7 560 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 PTF1AQ7RTS3 328 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 HPS6Q86YV9 775 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 DAGLBQ8NCG7 672 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 HDAC2Q92769 488 aaKnown RBP13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 INPP4AQ96PE3 977 aaPredicted RBP13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 PTPRHQ9HD43 1115 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 DPP3Q9NY33 737 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 TRPC4Q9UBN4 977 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 EFR3BQ9Y2G0 817 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 TBX1O43435 398 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 UGT1A9O60656 530 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 TIPRLO75663 272 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 JCHAINP01591 159 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 ASLP04424 464 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 UGT1A6P19224 532 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 UGT1A1P22309 533 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 UGT1A4P22310 534 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 PSMA1P25786 263 aaKnown RBP13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 UGT1A3P35503 534 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 UGT1A5P35504 534 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 RAB2AP61019 212 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 DNAAF5Q86Y56 855 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 SMYD1Q8NB12 490 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 C11orf24Q96F05 449 aaPredicted RBP13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 ZNF285Q96NJ3 590 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 TBCBQ99426 244 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 RIT2Q99578 217 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 TPK1Q9H3S4 243 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 EBF3Q9H4W6 596 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 UGT1A7Q9HAW7 530 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 UGT1A10Q9HAW8 530 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 UGT1A8Q9HAW9 530 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 MIEF1Q9NQG6 463 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 PLK2Q9NYY3 685 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 RABL2AQ9UBK7 228 aaPredicted RBP13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 CASKO14936 926 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 NPR2P20594 1047 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 CCNYL2Q5T2Q4 361 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 KCNV1Q6PIU1 500 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 ZNF621Q6ZSS3 439 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 SLC47A2Q86VL8 602 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 LSM14AQ8ND56 463 aaKnown RBP13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 ELMO1Q92556 727 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 NODALQ96S42 347 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 TDRD1Q9BXT4 1180 aaKnown RBP13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 LRRC19Q9H756 370 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 HACL1Q9UJ83 578 aa13.28□□□□□ -0.28
PCDHGA3-201ENST00000253812 UGT2B11O75310 529 aa13.27□□□□□ -0.28
PCDHGA3-201ENST00000253812 TGDSO95455 350 aa13.27□□□□□ -0.28
PCDHGA3-201ENST00000253812 F9P00740 461 aa13.27□□□□□ -0.28
PCDHGA3-201ENST00000253812 HOXD10P28358 340 aa13.27□□□□□ -0.28
PCDHGA3-201ENST00000253812 SYCE2Q6PIF2 218 aa13.27□□□□□ -0.28
PCDHGA3-201ENST00000253812 CBWD2Q8IUF1 395 aa13.27□□□□□ -0.28
PCDHGA3-201ENST00000253812 ATG4CQ96DT6 458 aa13.27□□□□□ -0.28
PCDHGA3-201ENST00000253812 FAM129BQ96TA1 746 aa13.27□□□□□ -0.28
PCDHGA3-201ENST00000253812 COPS4Q9BT78 406 aa13.27□□□□□ -0.28
PCDHGA3-201ENST00000253812 SAMHD1Q9Y3Z3 626 aaKnown RBP13.27□□□□□ -0.28
PCDHGA3-201ENST00000253812 DDTLA6NHG4 134 aaPredicted RBP13.27□□□□□ -0.29
PCDHGA3-201ENST00000253812 M0QYT0 321 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms