RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 CASC4Q6P4E1 433 aa18.85■□□□□ 0.61
SNX17-201ENST00000233575 UNC5AQ6ZN44 842 aa18.85■□□□□ 0.61
SNX17-201ENST00000233575 FBF1Q8TES7 1133 aa18.85■□□□□ 0.61
SNX17-201ENST00000233575 TADA1Q96BN2 335 aa18.85■□□□□ 0.61
SNX17-201ENST00000233575 OTUB2Q96DC9 234 aa18.85■□□□□ 0.61
SNX17-201ENST00000233575 TMBIM4Q9HC24 238 aa18.85■□□□□ 0.61
SNX17-201ENST00000233575 GOLGA6AQ9NYA3 693 aa18.85■□□□□ 0.61
SNX17-201ENST00000233575 BRWD1Q9NSI6 2320 aa18.85■□□□□ 0.61
SNX17-201ENST00000233575 TCRBV9S1A1TA0A576 114 aa18.84■□□□□ 0.61
SNX17-201ENST00000233575 OPA1O60313 960 aa18.84■□□□□ 0.61
SNX17-201ENST00000233575 ARSAP15289 507 aa18.84■□□□□ 0.61
SNX17-201ENST00000233575 IGFBP4P22692 258 aa18.84■□□□□ 0.61
SNX17-201ENST00000233575 CTSOP43234 321 aaPredicted RBP18.84■□□□□ 0.61
SNX17-201ENST00000233575 MPP3Q13368 585 aa18.84■□□□□ 0.61
SNX17-201ENST00000233575 RFTN1Q14699 578 aaPredicted RBP18.84■□□□□ 0.61
SNX17-201ENST00000233575 ALG1LQ6GMV1 187 aa18.84■□□□□ 0.61
SNX17-201ENST00000233575 CES5AQ6NT32 575 aa18.84■□□□□ 0.61
SNX17-201ENST00000233575 KRT222Q8N1A0 295 aa18.84■□□□□ 0.61
SNX17-201ENST00000233575 MICALL1Q8N3F8 863 aa18.84■□□□□ 0.61
SNX17-201ENST00000233575 LRRC39Q96DD0 335 aa18.84■□□□□ 0.61
SNX17-201ENST00000233575 STAMBPL1Q96FJ0 436 aa18.84■□□□□ 0.61
SNX17-201ENST00000233575 FSD1LQ9BXM9 530 aa18.84■□□□□ 0.61
SNX17-201ENST00000233575 EBF3Q9H4W6 596 aa18.84■□□□□ 0.61
SNX17-201ENST00000233575 NOD2Q9HC29 1040 aa18.84■□□□□ 0.61
SNX17-201ENST00000233575 CTNNAL1Q9UBT7 734 aa18.84■□□□□ 0.61
SNX17-201ENST00000233575 RABGEF1Q9UJ41 708 aa18.84■□□□□ 0.61
SNX17-201ENST00000233575 OTOL1A6NHN0 477 aaPredicted RBP18.84■□□□□ 0.61
SNX17-201ENST00000233575 SOX1O00570 391 aaPredicted RBP18.84■□□□□ 0.61
SNX17-201ENST00000233575 SLC9A3R1O14745 358 aaPredicted RBP18.84■□□□□ 0.61
SNX17-201ENST00000233575 SMAD6O43541 496 aaKnown RBP18.84■□□□□ 0.61
SNX17-201ENST00000233575 ATP9BO43861 1147 aa18.84■□□□□ 0.61
SNX17-201ENST00000233575 RNF40O75150 1001 aa18.84■□□□□ 0.61
SNX17-201ENST00000233575 MYZAPP0CAP1 466 aa18.84■□□□□ 0.61
SNX17-201ENST00000233575 CR2P20023 1033 aa18.84■□□□□ 0.61
SNX17-201ENST00000233575 GCAP28676 217 aa18.84■□□□□ 0.61
SNX17-201ENST00000233575 SCNN1BP51168 640 aa18.84■□□□□ 0.61
SNX17-201ENST00000233575 SKIDA1Q1XH10 827 aa18.84■□□□□ 0.61
SNX17-201ENST00000233575 PITRM1Q5JRX3 1037 aa18.84■□□□□ 0.61
SNX17-201ENST00000233575 CES3Q6UWW8 571 aa18.84■□□□□ 0.61
SNX17-201ENST00000233575 RANBP10Q6VN20 620 aa18.84■□□□□ 0.61
SNX17-201ENST00000233575 GOLGA6L1Q8N7Z2 621 aa18.84■□□□□ 0.61
SNX17-201ENST00000233575 MYLIPQ8WY64 445 aa18.84■□□□□ 0.61
SNX17-201ENST00000233575 RPL10LQ96L21 214 aaKnown RBP18.84■□□□□ 0.61
SNX17-201ENST00000233575 XPO6Q96QU8 1125 aaKnown RBP18.84■□□□□ 0.61
SNX17-201ENST00000233575 C2orf49Q9BVC5 232 aaPredicted RBP18.84■□□□□ 0.61
SNX17-201ENST00000233575 MARK1Q9P0L2 795 aa18.84■□□□□ 0.61
SNX17-201ENST00000233575 LHX3Q9UBR4 397 aa18.84■□□□□ 0.61
SNX17-201ENST00000233575 RASGRF2O14827 1237 aa18.83■□□□□ 0.61
SNX17-201ENST00000233575 PSMD3O43242 534 aa18.83■□□□□ 0.61
SNX17-201ENST00000233575 CDH17Q12864 832 aa18.83■□□□□ 0.61
SNX17-201ENST00000233575 VITQ6UXI7 678 aa18.83■□□□□ 0.61
SNX17-201ENST00000233575 UNC5BQ8IZJ1 945 aa18.83■□□□□ 0.61
SNX17-201ENST00000233575 BBS5Q8N3I7 341 aa18.83■□□□□ 0.61
SNX17-201ENST00000233575 SH2D3CQ8N5H7 860 aa18.83■□□□□ 0.61
SNX17-201ENST00000233575 SLC25A41Q8N5S1 370 aa18.83■□□□□ 0.61
SNX17-201ENST00000233575 MRRFQ96E11 262 aaKnown RBP18.83■□□□□ 0.61
SNX17-201ENST00000233575 POMKQ9H5K3 350 aa18.83■□□□□ 0.61
SNX17-201ENST00000233575 TRPV4Q9HBA0 871 aa18.83■□□□□ 0.61
SNX17-201ENST00000233575 VPS45Q9NRW7 570 aa18.83■□□□□ 0.61
SNX17-201ENST00000233575 GGA2Q9UJY4 613 aa18.83■□□□□ 0.61
SNX17-201ENST00000233575 BPTFQ12830 3046 aa18.83■□□□□ 0.61
SNX17-201ENST00000233575 STK19P49842 368 aaPredicted RBP18.83■□□□□ 0.6
SNX17-201ENST00000233575 PLK1P53350 603 aa18.83■□□□□ 0.6
SNX17-201ENST00000233575 SMAD1Q15797 465 aaKnown RBP18.83■□□□□ 0.6
SNX17-201ENST00000233575 TRMT10BQ6PF06 316 aaKnown RBP18.83■□□□□ 0.6
SNX17-201ENST00000233575 LINC00523Q86TU6 105 aa18.83■□□□□ 0.6
SNX17-201ENST00000233575 C12orf40Q86WS4 652 aa18.83■□□□□ 0.6
SNX17-201ENST00000233575 ACDQ96AP0 544 aa18.83■□□□□ 0.6
SNX17-201ENST00000233575 MSLNLQ96KJ4 702 aa18.83■□□□□ 0.6
SNX17-201ENST00000233575 PPP1R2P1Q96PQ5 205 aa18.83■□□□□ 0.6
SNX17-201ENST00000233575 TMEM109Q9BVC6 243 aa18.83■□□□□ 0.6
SNX17-201ENST00000233575 PLA2G2FQ9BZM2 168 aa18.83■□□□□ 0.6
SNX17-201ENST00000233575 BFARQ9NZS9 450 aa18.83■□□□□ 0.6
SNX17-201ENST00000233575 BCCIPQ9P287 314 aaKnown RBP eCLIP18.83■□□□□ 0.6
SNX17-201ENST00000233575 EXOC1LA0A1B0GW35 172 aa18.82■□□□□ 0.6
SNX17-201ENST00000233575 POC1B-GALNT4F8VUJ3 575 aa18.82■□□□□ 0.6
SNX17-201ENST00000233575 C1QAP02745 245 aa18.82■□□□□ 0.6
SNX17-201ENST00000233575 PABPC1P11940 636 aaKnown RBP18.82■□□□□ 0.6
SNX17-201ENST00000233575 GBP2P32456 591 aaPredicted RBP18.82■□□□□ 0.6
SNX17-201ENST00000233575 PHBP35232 272 aa18.82■□□□□ 0.6
SNX17-201ENST00000233575 STAT4Q14765 748 aa18.82■□□□□ 0.6
SNX17-201ENST00000233575 INO80DQ53TQ3 878 aaPredicted RBP18.82■□□□□ 0.6
SNX17-201ENST00000233575 ATXN7L2Q5T6C5 722 aaPredicted RBP18.82■□□□□ 0.6
SNX17-201ENST00000233575 DENND4AQ7Z401 1863 aa18.82■□□□□ 0.6
SNX17-201ENST00000233575 GOLGA6L10A6NI86 522 aa18.81■□□□□ 0.6
SNX17-201ENST00000233575 FOXO6A8MYZ6 492 aa18.81■□□□□ 0.6
SNX17-201ENST00000233575 ADH5P11766 374 aa18.81■□□□□ 0.6
SNX17-201ENST00000233575 SERPINH1P50454 418 aaKnown RBP18.81■□□□□ 0.6
SNX17-201ENST00000233575 TMEM215Q68D42 235 aa18.81■□□□□ 0.6
SNX17-201ENST00000233575 RETSATQ6NUM9 610 aa18.81■□□□□ 0.6
SNX17-201ENST00000233575 LRCH3Q96II8 777 aa18.81■□□□□ 0.6
SNX17-201ENST00000233575 KXD1Q9BQD3 176 aa18.81■□□□□ 0.6
SNX17-201ENST00000233575 FAM83CQ9BQN1 747 aa18.81■□□□□ 0.6
SNX17-201ENST00000233575 TM6SF2Q9BZW4 377 aa18.81■□□□□ 0.6
SNX17-201ENST00000233575 ACSS3Q9H6R3 686 aa18.81■□□□□ 0.6
SNX17-201ENST00000233575 ZFP14Q9HCL3 533 aa18.81■□□□□ 0.6
SNX17-201ENST00000233575 CHRAC1Q9NRG0 131 aa18.81■□□□□ 0.6
SNX17-201ENST00000233575 SMYD2Q9NRG4 433 aa18.81■□□□□ 0.6
SNX17-201ENST00000233575 KIF26AQ9ULI4 1882 aaPredicted RBP18.81■□□□□ 0.6
SNX17-201ENST00000233575 ANKRD36A6QL64 1941 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms