RNA–Protein interactions for RNA: ENST00000227524.8

PRPF19-201, Transcript of pre-mRNA processing factor 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF19, Length 2,157 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-201ENST00000227524 RNASEH2AO75792 299 aaKnown RBP17.71■□□□□ 0.43
PRPF19-201ENST00000227524 NDUFV1P49821 464 aa17.71■□□□□ 0.43
PRPF19-201ENST00000227524 INHBCP55103 352 aa17.71■□□□□ 0.43
PRPF19-201ENST00000227524 SLC12A1Q13621 1099 aa17.71■□□□□ 0.43
PRPF19-201ENST00000227524 CENPLQ8N0S6 344 aaPredicted RBP17.71■□□□□ 0.43
PRPF19-201ENST00000227524 FSTL5Q8N475 847 aaPredicted RBP17.71■□□□□ 0.43
PRPF19-201ENST00000227524 DDI1Q8WTU0 396 aa17.71■□□□□ 0.43
PRPF19-201ENST00000227524 APBA2Q99767 749 aa17.71■□□□□ 0.43
PRPF19-201ENST00000227524 ZFYVE28Q9HCC9 887 aa17.71■□□□□ 0.43
PRPF19-201ENST00000227524 NSMCE4AQ9NXX6 385 aa17.71■□□□□ 0.43
PRPF19-201ENST00000227524 UBQLN1Q9UMX0 589 aaKnown RBP17.71■□□□□ 0.43
PRPF19-201ENST00000227524 DLX3O60479 287 aa17.7■□□□□ 0.42
PRPF19-201ENST00000227524 ADRA1BP35368 520 aa17.7■□□□□ 0.42
PRPF19-201ENST00000227524 TPI1P60174 286 aa17.7■□□□□ 0.42
PRPF19-201ENST00000227524 SEMA3BQ13214 749 aa17.7■□□□□ 0.42
PRPF19-201ENST00000227524 TBC1D25Q3MII6 688 aa17.7■□□□□ 0.42
PRPF19-201ENST00000227524 ITPRIPL1Q6GPH6 555 aa17.7■□□□□ 0.42
PRPF19-201ENST00000227524 ALKAL1Q6UXT8 129 aa17.7■□□□□ 0.42
PRPF19-201ENST00000227524 HFE2Q6ZVN8 426 aa17.7■□□□□ 0.42
PRPF19-201ENST00000227524 SLC41A1Q8IVJ1 513 aa17.7■□□□□ 0.42
PRPF19-201ENST00000227524 FAM156AQ8NDB6 213 aa17.7■□□□□ 0.42
PRPF19-201ENST00000227524 DUSP16Q9BY84 665 aa17.7■□□□□ 0.42
PRPF19-201ENST00000227524 ANLNQ9NQW6 1124 aa17.7■□□□□ 0.42
PRPF19-201ENST00000227524 GDAP2Q9NXN4 497 aa17.7■□□□□ 0.42
PRPF19-201ENST00000227524 TRHDEQ9UKU6 1024 aa17.7■□□□□ 0.42
PRPF19-201ENST00000227524 CNOT11Q9UKZ1 510 aaKnown RBP17.7■□□□□ 0.42
PRPF19-201ENST00000227524 PADI4Q9UM07 663 aa17.7■□□□□ 0.42
PRPF19-201ENST00000227524 CCDC78A2IDD5 438 aa17.7■□□□□ 0.42
PRPF19-201ENST00000227524 CLDN5O00501 218 aa17.7■□□□□ 0.42
PRPF19-201ENST00000227524 NCAM2O15394 837 aa17.7■□□□□ 0.42
PRPF19-201ENST00000227524 BEST1O76090 585 aa17.7■□□□□ 0.42
PRPF19-201ENST00000227524 RECQL4O94761 1208 aa17.7■□□□□ 0.42
PRPF19-201ENST00000227524 SMIM10L2AP0DMW4 78 aa17.7■□□□□ 0.42
PRPF19-201ENST00000227524 SMIM10L2BP0DMW5 78 aa17.7■□□□□ 0.42
PRPF19-201ENST00000227524 TCN1P20061 433 aaPredicted RBP17.7■□□□□ 0.42
PRPF19-201ENST00000227524 USP46P62068 366 aa17.7■□□□□ 0.42
PRPF19-201ENST00000227524 PTK2BQ14289 1009 aa17.7■□□□□ 0.42
PRPF19-201ENST00000227524 PAOXQ6QHF9 649 aa17.7■□□□□ 0.42
PRPF19-201ENST00000227524 KDM1BQ8NB78 822 aa17.7■□□□□ 0.42
PRPF19-201ENST00000227524 B3GALNT2Q8NCR0 500 aa17.7■□□□□ 0.42
PRPF19-201ENST00000227524 APPL2Q8NEU8 664 aa17.7■□□□□ 0.42
PRPF19-201ENST00000227524 HDAC11Q96DB2 347 aa17.7■□□□□ 0.42
PRPF19-201ENST00000227524 ZNF560Q96MR9 790 aa17.7■□□□□ 0.42
PRPF19-201ENST00000227524 NXF3Q9H4D5 531 aaKnown RBP17.7■□□□□ 0.42
PRPF19-201ENST00000227524 XPR1Q9UBH6 696 aa17.7■□□□□ 0.42
PRPF19-201ENST00000227524 TMEM233B4DJY2 109 aa17.69■□□□□ 0.42
PRPF19-201ENST00000227524 I6L893 689 aaPredicted RBP17.69■□□□□ 0.42
PRPF19-201ENST00000227524 TNPO2O14787 897 aaKnown RBP17.69■□□□□ 0.42
PRPF19-201ENST00000227524 MTSS1O43312 755 aa17.69■□□□□ 0.42
PRPF19-201ENST00000227524 PYGLP06737 847 aa17.69■□□□□ 0.42
PRPF19-201ENST00000227524 COL6A2P12110 1019 aa17.69■□□□□ 0.42
PRPF19-201ENST00000227524 TSTD2Q5T7W7 516 aa17.69■□□□□ 0.42
PRPF19-201ENST00000227524 BORAQ6PGQ7 559 aa17.69■□□□□ 0.42
PRPF19-201ENST00000227524 OSTM1Q86WC4 334 aa17.69■□□□□ 0.42
PRPF19-201ENST00000227524 ALDH16A1Q8IZ83 802 aa17.69■□□□□ 0.42
PRPF19-201ENST00000227524 NTAN1Q96AB6 310 aa17.69■□□□□ 0.42
PRPF19-201ENST00000227524 TNIP3Q96KP6 325 aa17.69■□□□□ 0.42
PRPF19-201ENST00000227524 SLC9A7Q96T83 725 aa17.69■□□□□ 0.42
PRPF19-201ENST00000227524 HNRNPABQ99729 332 aaKnown RBP17.69■□□□□ 0.42
PRPF19-201ENST00000227524 MRPL1Q9BYD6 325 aaKnown RBP17.69■□□□□ 0.42
PRPF19-201ENST00000227524 DNAI2Q9GZS0 605 aa17.69■□□□□ 0.42
PRPF19-201ENST00000227524 ADAMTS10Q9H324 1103 aa17.69■□□□□ 0.42
PRPF19-201ENST00000227524 UBP1Q9NZI7 540 aa17.69■□□□□ 0.42
PRPF19-201ENST00000227524 MYLKQ15746 1914 aa17.69■□□□□ 0.42
PRPF19-201ENST00000227524 ARHGAP10A1A4S6 786 aa17.69■□□□□ 0.42
PRPF19-201ENST00000227524 MBLAC1A4D2B0 266 aaPredicted RBP17.69■□□□□ 0.42
PRPF19-201ENST00000227524 HAS3O00219 553 aa17.69■□□□□ 0.42
PRPF19-201ENST00000227524 SDHDO14521 159 aa17.69■□□□□ 0.42
PRPF19-201ENST00000227524 HSPA1AP0DMV8 641 aaKnown RBP17.69■□□□□ 0.42
PRPF19-201ENST00000227524 HSPA1BP0DMV9 641 aaKnown RBP17.69■□□□□ 0.42
PRPF19-201ENST00000227524 ZNF26P17031 533 aaPredicted RBP17.69■□□□□ 0.42
PRPF19-201ENST00000227524 NPR3P17342 541 aa17.69■□□□□ 0.42
PRPF19-201ENST00000227524 GABRB3P28472 473 aa17.69■□□□□ 0.42
PRPF19-201ENST00000227524 TM4SF4P48230 202 aa17.69■□□□□ 0.42
PRPF19-201ENST00000227524 AIF1P55008 147 aa17.69■□□□□ 0.42
PRPF19-201ENST00000227524 NR1H2P55055 460 aa17.69■□□□□ 0.42
PRPF19-201ENST00000227524 ADAM17P78536 824 aa17.69■□□□□ 0.42
PRPF19-201ENST00000227524 CDH17Q12864 832 aa17.69■□□□□ 0.42
PRPF19-201ENST00000227524 MGAT5BQ3V5L5 792 aa17.69■□□□□ 0.42
PRPF19-201ENST00000227524 IL23RQ5VWK5 629 aa17.69■□□□□ 0.42
PRPF19-201ENST00000227524 GK5Q6ZS86 529 aa17.69■□□□□ 0.42
PRPF19-201ENST00000227524 CATSPER4Q7RTX7 472 aa17.69■□□□□ 0.42
PRPF19-201ENST00000227524 LIMS2Q7Z4I7 341 aa17.69■□□□□ 0.42
PRPF19-201ENST00000227524 AMIGO2Q86SJ2 522 aa17.69■□□□□ 0.42
PRPF19-201ENST00000227524 CHERPQ8IWX8 916 aaKnown RBP17.69■□□□□ 0.42
PRPF19-201ENST00000227524 SIX6OS1Q8N1H7 587 aa17.69■□□□□ 0.42
PRPF19-201ENST00000227524 CCNYL1Q8N7R7 359 aa17.69■□□□□ 0.42
PRPF19-201ENST00000227524 SOCS4Q8WXH5 440 aa17.69■□□□□ 0.42
PRPF19-201ENST00000227524 ATP6V1E2Q96A05 226 aa17.69■□□□□ 0.42
PRPF19-201ENST00000227524 ASB9Q96DX5 294 aa17.69■□□□□ 0.42
PRPF19-201ENST00000227524 MAELQ96JY0 434 aaKnown RBP17.69■□□□□ 0.42
PRPF19-201ENST00000227524 KIFC1Q9BW19 673 aa17.69■□□□□ 0.42
PRPF19-201ENST00000227524 BRD8Q9H0E9 1235 aa17.69■□□□□ 0.42
PRPF19-201ENST00000227524 LRRC4Q9HBW1 653 aa17.69■□□□□ 0.42
PRPF19-201ENST00000227524 WDR6Q9NNW5 1121 aaKnown RBP17.69■□□□□ 0.42
PRPF19-201ENST00000227524 DDX18Q9NVP1 670 aaKnown RBP17.69■□□□□ 0.42
PRPF19-201ENST00000227524 ADA2Q9NZK5 511 aa17.69■□□□□ 0.42
PRPF19-201ENST00000227524 GINS2Q9Y248 185 aa17.69■□□□□ 0.42
PRPF19-201ENST00000227524 RRN3P2A6NIE6 340 aa17.68■□□□□ 0.42
PRPF19-201ENST00000227524 HNRNPRO43390 633 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms