RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 ARHGEF15O94989 841 aa13.81□□□□□ -0.2
GABPB1-201ENST00000220429 LGALS2P05162 132 aa13.81□□□□□ -0.2
GABPB1-201ENST00000220429 CAPN1P07384 714 aa13.81□□□□□ -0.2
GABPB1-201ENST00000220429 NFICP08651 508 aa13.81□□□□□ -0.2
GABPB1-201ENST00000220429 ZNF26P17031 533 aaPredicted RBP13.81□□□□□ -0.2
GABPB1-201ENST00000220429 CCNA2P20248 432 aa13.81□□□□□ -0.2
GABPB1-201ENST00000220429 ITGAXP20702 1163 aa13.81□□□□□ -0.2
GABPB1-201ENST00000220429 MAP4P27816 1152 aaKnown RBP13.81□□□□□ -0.2
GABPB1-201ENST00000220429 HADHAP40939 763 aa13.81□□□□□ -0.2
GABPB1-201ENST00000220429 PMS2P3Q13401 168 aa13.81□□□□□ -0.2
GABPB1-201ENST00000220429 FASTKD3Q14CZ7 662 aaKnown RBP13.81□□□□□ -0.2
GABPB1-201ENST00000220429 TAPT1Q6NXT6 567 aa13.81□□□□□ -0.2
GABPB1-201ENST00000220429 PPP1R16BQ96T49 567 aa13.81□□□□□ -0.2
GABPB1-201ENST00000220429 NFKBIZQ9BYH8 718 aa13.81□□□□□ -0.2
GABPB1-201ENST00000220429 ZNF518BQ9C0D4 1074 aa13.81□□□□□ -0.2
GABPB1-201ENST00000220429 OR2B2Q9GZK3 357 aa13.81□□□□□ -0.2
GABPB1-201ENST00000220429 NANOGQ9H9S0 305 aa13.81□□□□□ -0.2
GABPB1-201ENST00000220429 RPF1Q9H9Y2 349 aaKnown RBP13.81□□□□□ -0.2
GABPB1-201ENST00000220429 FADS2P1A8MWK0 482 aa13.8□□□□□ -0.2
GABPB1-201ENST00000220429 ASNA1O43681 348 aa13.8□□□□□ -0.2
GABPB1-201ENST00000220429 GPC4O75487 556 aa13.8□□□□□ -0.2
GABPB1-201ENST00000220429 KRT19P08727 400 aa13.8□□□□□ -0.2
GABPB1-201ENST00000220429 CDH1P12830 882 aa13.8□□□□□ -0.2
GABPB1-201ENST00000220429 EPHA3P29320 983 aa13.8□□□□□ -0.2
GABPB1-201ENST00000220429 GRM5P41594 1212 aa13.8□□□□□ -0.2
GABPB1-201ENST00000220429 NFX1Q12986 1120 aaKnown RBP13.8□□□□□ -0.2
GABPB1-201ENST00000220429 MAPRE1Q15691 268 aaKnown RBP13.8□□□□□ -0.2
GABPB1-201ENST00000220429 AMHR2Q16671 573 aa13.8□□□□□ -0.2
GABPB1-201ENST00000220429 EFHC2Q5JST6 749 aa13.8□□□□□ -0.2
GABPB1-201ENST00000220429 LDLRAD1Q5T700 205 aa13.8□□□□□ -0.2
GABPB1-201ENST00000220429 UGT3A1Q6NUS8 523 aa13.8□□□□□ -0.2
GABPB1-201ENST00000220429 NEK5Q6P3R8 708 aa13.8□□□□□ -0.2
GABPB1-201ENST00000220429 MAMDC4Q6UXC1 1216 aa13.8□□□□□ -0.2
GABPB1-201ENST00000220429 C1orf127Q8N9H9 656 aa13.8□□□□□ -0.2
GABPB1-201ENST00000220429 PMEPA1Q969W9 287 aa13.8□□□□□ -0.2
GABPB1-201ENST00000220429 ZNF597Q96LX8 424 aa13.8□□□□□ -0.2
GABPB1-201ENST00000220429 CLSTN3Q9BQT9 956 aa13.8□□□□□ -0.2
GABPB1-201ENST00000220429 PLEKHA5Q9HAU0 1116 aa13.8□□□□□ -0.2
GABPB1-201ENST00000220429 GIMAP4Q9NUV9 329 aa13.8□□□□□ -0.2
GABPB1-201ENST00000220429 PRMT7Q9NVM4 692 aaPredicted RBP13.8□□□□□ -0.2
GABPB1-201ENST00000220429 TMEM9Q9P0T7 183 aa13.8□□□□□ -0.2
GABPB1-201ENST00000220429 MARCOQ9UEW3 520 aaPredicted RBP13.8□□□□□ -0.2
GABPB1-201ENST00000220429 RWDD3Q9Y3V2 267 aa13.8□□□□□ -0.2
GABPB1-201ENST00000220429 A0A087WZ62 844 aa13.8□□□□□ -0.2
GABPB1-201ENST00000220429 H0YJX3 145 aa13.8□□□□□ -0.2
GABPB1-201ENST00000220429 IL18RAPO95256 599 aa13.8□□□□□ -0.2
GABPB1-201ENST00000220429 RAB39AQ14964 217 aa13.8□□□□□ -0.2
GABPB1-201ENST00000220429 ZNF484Q5JVG2 852 aa13.8□□□□□ -0.2
GABPB1-201ENST00000220429 TXNRD3NBQ6F5E7 133 aa13.8□□□□□ -0.2
GABPB1-201ENST00000220429 DENND1BQ6P3S1 775 aa13.8□□□□□ -0.2
GABPB1-201ENST00000220429 DCUN1D2Q6PH85 259 aa13.8□□□□□ -0.2
GABPB1-201ENST00000220429 MFSD7Q6UXD7 560 aa13.8□□□□□ -0.2
GABPB1-201ENST00000220429 LINC01465Q8N7H1 131 aa13.8□□□□□ -0.2
GABPB1-201ENST00000220429 PDPRQ8NCN5 879 aa13.8□□□□□ -0.2
GABPB1-201ENST00000220429 SLITRK1Q96PX8 696 aa13.8□□□□□ -0.2
GABPB1-201ENST00000220429 FDXACB1Q9BRP7 624 aaPredicted RBP13.8□□□□□ -0.2
GABPB1-201ENST00000220429 CNTN3Q9P232 1028 aa13.8□□□□□ -0.2
GABPB1-201ENST00000220429 PTBP2Q9UKA9 531 aaKnown RBP13.8□□□□□ -0.2
GABPB1-201ENST00000220429 A8MX80 341 aa13.79□□□□□ -0.2
GABPB1-201ENST00000220429 LACTBL1A8MY62 500 aa13.79□□□□□ -0.2
GABPB1-201ENST00000220429 AREL1O15033 823 aa13.79□□□□□ -0.2
GABPB1-201ENST00000220429 CSPG5O95196 566 aa13.79□□□□□ -0.2
GABPB1-201ENST00000220429 ITGBL1O95965 494 aaPredicted RBP13.79□□□□□ -0.2
GABPB1-201ENST00000220429 STAG3L1P0CL83 205 aa13.79□□□□□ -0.2
GABPB1-201ENST00000220429 ITIH1P19827 911 aa13.79□□□□□ -0.2
GABPB1-201ENST00000220429 RPL10P27635 214 aaKnown RBP13.79□□□□□ -0.2
GABPB1-201ENST00000220429 OPRL1P41146 370 aa13.79□□□□□ -0.2
GABPB1-201ENST00000220429 CDH8P55286 799 aa13.79□□□□□ -0.2
GABPB1-201ENST00000220429 ZNF792Q3KQV3 632 aa13.79□□□□□ -0.2
GABPB1-201ENST00000220429 ATG16L1Q676U5 607 aa13.79□□□□□ -0.2
GABPB1-201ENST00000220429 ZNF717Q9BY31 904 aaPredicted RBP13.79□□□□□ -0.2
GABPB1-201ENST00000220429 BCO2Q9BYV7 579 aa13.79□□□□□ -0.2
GABPB1-201ENST00000220429 SDCBP2Q9H190 292 aa13.79□□□□□ -0.2
GABPB1-201ENST00000220429 UBA2Q9UBT2 640 aaPredicted RBP13.79□□□□□ -0.2
GABPB1-201ENST00000220429 TJP2Q9UDY2 1190 aa13.79□□□□□ -0.2
GABPB1-201ENST00000220429 CYTH4Q9UIA0 394 aa13.79□□□□□ -0.2
GABPB1-201ENST00000220429 MLLT10P55197 1068 aa13.79□□□□□ -0.2
GABPB1-201ENST00000220429 TAGLNQ01995 201 aaKnown RBP13.79□□□□□ -0.2
GABPB1-201ENST00000220429 ORC1Q13415 861 aa13.79□□□□□ -0.2
GABPB1-201ENST00000220429 LAMC2Q13753 1193 aa13.79□□□□□ -0.2
GABPB1-201ENST00000220429 CARTPTQ16568 116 aa13.79□□□□□ -0.2
GABPB1-201ENST00000220429 FAM187BQ17R55 369 aa13.79□□□□□ -0.2
GABPB1-201ENST00000220429 BBS9Q3SYG4 887 aa13.79□□□□□ -0.2
GABPB1-201ENST00000220429 PTPN20Q4JDL3 420 aa13.79□□□□□ -0.2
GABPB1-201ENST00000220429 ZNF667Q5HYK9 610 aa13.79□□□□□ -0.2
GABPB1-201ENST00000220429 PLEKHG7Q6ZR37 379 aa13.79□□□□□ -0.2
GABPB1-201ENST00000220429 LURAP1LQ8IV03 231 aa13.79□□□□□ -0.2
GABPB1-201ENST00000220429 RCOR2Q8IZ40 523 aa13.79□□□□□ -0.2
GABPB1-201ENST00000220429 MZB1Q8WU39 189 aa13.79□□□□□ -0.2
GABPB1-201ENST00000220429 GLMNQ92990 594 aa13.79□□□□□ -0.2
GABPB1-201ENST00000220429 SH3YL1Q96HL8 342 aaPredicted RBP13.79□□□□□ -0.2
GABPB1-201ENST00000220429 EBF4Q9BQW3 602 aa13.79□□□□□ -0.2
GABPB1-201ENST00000220429 HMG20AQ9NP66 347 aa13.79□□□□□ -0.2
GABPB1-201ENST00000220429 CFL2Q9Y281 166 aa13.79□□□□□ -0.2
GABPB1-201ENST00000220429 ZW10O43264 779 aa13.78□□□□□ -0.2
GABPB1-201ENST00000220429 KRT1P04264 644 aa13.78□□□□□ -0.2
GABPB1-201ENST00000220429 CD19P15391 556 aa13.78□□□□□ -0.2
GABPB1-201ENST00000220429 CFL1P23528 166 aaKnown RBP13.78□□□□□ -0.2
GABPB1-201ENST00000220429 ADORA2AP29274 412 aa13.78□□□□□ -0.2
GABPB1-201ENST00000220429 PKLRP30613 574 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms