RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 NXNL1Q96CM4 212 aa17.5■□□□□ 0.39
USB1-201ENST00000219281 TMA16Q96EY4 203 aaKnown RBP17.5■□□□□ 0.39
USB1-201ENST00000219281 VAT1Q99536 393 aa17.5■□□□□ 0.39
USB1-201ENST00000219281 PKP2Q99959 881 aa17.5■□□□□ 0.39
USB1-201ENST00000219281 EFCAB1Q9HAE3 211 aa17.5■□□□□ 0.39
USB1-201ENST00000219281 CRTAC1Q9NQ79 661 aa17.5■□□□□ 0.39
USB1-201ENST00000219281 CACNG4Q9UBN1 327 aa17.5■□□□□ 0.39
USB1-201ENST00000219281 OR12D3Q9UGF7 316 aa17.5■□□□□ 0.39
USB1-201ENST00000219281 BCAP29Q9UHQ4 241 aa17.5■□□□□ 0.39
USB1-201ENST00000219281 RAB26Q9ULW5 256 aa17.5■□□□□ 0.39
USB1-201ENST00000219281 ACOT9Q9Y305 439 aa17.5■□□□□ 0.39
USB1-201ENST00000219281 COPG1Q9Y678 874 aaKnown RBP17.5■□□□□ 0.39
USB1-201ENST00000219281 HAS3O00219 553 aa17.5■□□□□ 0.39
USB1-201ENST00000219281 TREHO43280 583 aa17.5■□□□□ 0.39
USB1-201ENST00000219281 SPATA31D3P0C874 917 aa17.5■□□□□ 0.39
USB1-201ENST00000219281 TCN1P20061 433 aaPredicted RBP17.5■□□□□ 0.39
USB1-201ENST00000219281 GK3PQ14409 553 aa17.5■□□□□ 0.39
USB1-201ENST00000219281 HERC3Q15034 1050 aa17.5■□□□□ 0.39
USB1-201ENST00000219281 SPATA31D4Q6ZUB0 917 aa17.5■□□□□ 0.39
USB1-201ENST00000219281 SMOQ99835 787 aa17.5■□□□□ 0.39
USB1-201ENST00000219281 COLEC11Q9BWP8 271 aa17.5■□□□□ 0.39
USB1-201ENST00000219281 LZTS1Q9Y250 596 aa17.5■□□□□ 0.39
USB1-201ENST00000219281 PGK1P00558 417 aa17.49■□□□□ 0.39
USB1-201ENST00000219281 ADSLP30566 484 aaPredicted RBP17.49■□□□□ 0.39
USB1-201ENST00000219281 RPS6KA3P51812 740 aa17.49■□□□□ 0.39
USB1-201ENST00000219281 CDC42EP1Q00587 391 aa17.49■□□□□ 0.39
USB1-201ENST00000219281 BEX3Q00994 111 aa17.49■□□□□ 0.39
USB1-201ENST00000219281 SLC5A9Q2M3M2 681 aa17.49■□□□□ 0.39
USB1-201ENST00000219281 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.49■□□□□ 0.39
USB1-201ENST00000219281 TICAM1Q8IUC6 712 aa17.49■□□□□ 0.39
USB1-201ENST00000219281 MFSD6LQ8IWD5 586 aa17.49■□□□□ 0.39
USB1-201ENST00000219281 GALNT4Q8N4A0 578 aa17.49■□□□□ 0.39
USB1-201ENST00000219281 CNTD1Q8N815 330 aa17.49■□□□□ 0.39
USB1-201ENST00000219281 FAM156AQ8NDB6 213 aa17.49■□□□□ 0.39
USB1-201ENST00000219281 ZSCAN18Q8TBC5 510 aaPredicted RBP17.49■□□□□ 0.39
USB1-201ENST00000219281 PRICKLE1Q96MT3 831 aaPredicted RBP17.49■□□□□ 0.39
USB1-201ENST00000219281 EPAS1Q99814 870 aa17.49■□□□□ 0.39
USB1-201ENST00000219281 TKTL2Q9H0I9 626 aa17.49■□□□□ 0.39
USB1-201ENST00000219281 WDCPQ9H6R7 721 aa17.49■□□□□ 0.39
USB1-201ENST00000219281 NDUFA13Q9P0J0 144 aa17.49■□□□□ 0.39
USB1-201ENST00000219281 APPL1Q9UKG1 709 aa17.49■□□□□ 0.39
USB1-201ENST00000219281 TSC2P49815 1807 aa17.49■□□□□ 0.39
USB1-201ENST00000219281 C9IYK1 514 aa17.49■□□□□ 0.39
USB1-201ENST00000219281 TADA2AO75478 443 aa17.49■□□□□ 0.39
USB1-201ENST00000219281 CAPN15O75808 1086 aa17.49■□□□□ 0.39
USB1-201ENST00000219281 BCAS2O75934 225 aaPredicted RBP17.49■□□□□ 0.39
USB1-201ENST00000219281 LRIG2O94898 1065 aa17.49■□□□□ 0.39
USB1-201ENST00000219281 VAPBO95292 243 aa17.49■□□□□ 0.39
USB1-201ENST00000219281 CLPTM1O96005 669 aa17.49■□□□□ 0.39
USB1-201ENST00000219281 TFAP2AP05549 437 aa17.49■□□□□ 0.39
USB1-201ENST00000219281 SRGAP2BP0DMP2 458 aa17.49■□□□□ 0.39
USB1-201ENST00000219281 RPL5P46777 297 aaKnown RBP17.49■□□□□ 0.39
USB1-201ENST00000219281 GJA9P57773 515 aa17.49■□□□□ 0.39
USB1-201ENST00000219281 POU6F1Q14863 301 aa17.49■□□□□ 0.39
USB1-201ENST00000219281 C6orf52Q5T4I8 152 aa17.49■□□□□ 0.39
USB1-201ENST00000219281 TSTD2Q5T7W7 516 aa17.49■□□□□ 0.39
USB1-201ENST00000219281 PKN3Q6P5Z2 889 aa17.49■□□□□ 0.39
USB1-201ENST00000219281 CATSPER1Q8NEC5 780 aa17.49■□□□□ 0.39
USB1-201ENST00000219281 ADCY4Q8NFM4 1077 aa17.49■□□□□ 0.39
USB1-201ENST00000219281 SGF29Q96ES7 293 aa17.49■□□□□ 0.39
USB1-201ENST00000219281 KLHL32Q96NJ5 620 aa17.49■□□□□ 0.39
USB1-201ENST00000219281 FTHL17Q9BXU8 183 aa17.49■□□□□ 0.39
USB1-201ENST00000219281 EPB41L1Q9H4G0 881 aa17.49■□□□□ 0.39
USB1-201ENST00000219281 SUDS3Q9H7L9 328 aaPredicted RBP17.49■□□□□ 0.39
USB1-201ENST00000219281 TMEM30AQ9NV96 361 aa17.49■□□□□ 0.39
USB1-201ENST00000219281 IPPQ9Y573 584 aa17.49■□□□□ 0.39
USB1-201ENST00000219281 CEP350Q5VT06 3117 aa17.48■□□□□ 0.39
USB1-201ENST00000219281 KLHL33A6NCF5 533 aa17.48■□□□□ 0.39
USB1-201ENST00000219281 TCAF2A6NFQ2 919 aa17.48■□□□□ 0.39
USB1-201ENST00000219281 GABRDO14764 452 aa17.48■□□□□ 0.39
USB1-201ENST00000219281 MT-CYBP00156 380 aaPredicted RBP17.48■□□□□ 0.39
USB1-201ENST00000219281 AXLP30530 894 aa17.48■□□□□ 0.39
USB1-201ENST00000219281 PSEN2P49810 448 aa17.48■□□□□ 0.39
USB1-201ENST00000219281 RAB10P61026 200 aa17.48■□□□□ 0.39
USB1-201ENST00000219281 SNX17Q15036 470 aa17.48■□□□□ 0.39
USB1-201ENST00000219281 TAF1CQ15572 869 aaPredicted RBP17.48■□□□□ 0.39
USB1-201ENST00000219281 PCID2Q5JVF3 399 aa17.48■□□□□ 0.39
USB1-201ENST00000219281 SH2D4BQ5SQS7 431 aa17.48■□□□□ 0.39
USB1-201ENST00000219281 C17orf99Q6UX52 265 aa17.48■□□□□ 0.39
USB1-201ENST00000219281 RBM44Q6ZP01 1051 aaKnown RBP17.48■□□□□ 0.39
USB1-201ENST00000219281 ARHGAP36Q6ZRI8 547 aa17.48■□□□□ 0.39
USB1-201ENST00000219281 LINC00523Q86TU6 105 aa17.48■□□□□ 0.39
USB1-201ENST00000219281 TMEM126BQ8IUX1 230 aa17.48■□□□□ 0.39
USB1-201ENST00000219281 KDM1BQ8NB78 822 aa17.48■□□□□ 0.39
USB1-201ENST00000219281 PDCD6IPQ8WUM4 868 aaKnown RBP17.48■□□□□ 0.39
USB1-201ENST00000219281 DGCR14Q96DF8 476 aaKnown RBP17.48■□□□□ 0.39
USB1-201ENST00000219281 GPR78Q96P69 363 aa17.48■□□□□ 0.39
USB1-201ENST00000219281 TRIP12Q14669 1992 aaPredicted RBP17.48■□□□□ 0.39
USB1-201ENST00000219281 PRSS51A0A1B0GVH4 220 aa17.47■□□□□ 0.39
USB1-201ENST00000219281 FAM95CA0A1B0GW59 222 aa17.47■□□□□ 0.39
USB1-201ENST00000219281 COL6A2P12110 1019 aa17.47■□□□□ 0.39
USB1-201ENST00000219281 IRF5Q13568 498 aa17.47■□□□□ 0.39
USB1-201ENST00000219281 PCBP1Q15365 356 aaKnown RBP eCLIP17.47■□□□□ 0.39
USB1-201ENST00000219281 ARMC3Q5W041 872 aa17.47■□□□□ 0.39
USB1-201ENST00000219281 GK5Q6ZS86 529 aa17.47■□□□□ 0.39
USB1-201ENST00000219281 RASAL3Q86YV0 1011 aa17.47■□□□□ 0.39
USB1-201ENST00000219281 METTL25Q8N6Q8 603 aa17.47■□□□□ 0.39
USB1-201ENST00000219281 SMG8Q8ND04 991 aaKnown RBP17.47■□□□□ 0.39
USB1-201ENST00000219281 ZMIZ2Q8NF64 920 aa17.47■□□□□ 0.39
USB1-201ENST00000219281 DPF3Q92784 378 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms