RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 PQLC1Q8N2U9 271 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 EMC1Q8N766 993 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 ZSWIM2Q8NEG5 633 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 OR52L1Q8NGH7 329 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 SLC44A1Q8WWI5 657 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 EZH1Q92800 747 aaPredicted RBP4.46□□□□□ -1.7
CHD9-201ENST00000219084 TLCD1Q96CP7 247 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 PAIP1Q9H074 479 aaKnown RBP4.46□□□□□ -1.7
CHD9-201ENST00000219084 HDHD2Q9H0R4 259 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 POLIQ9UNA4 740 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 TLL2Q9Y6L7 1015 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 ECM29Q5VYK3 1845 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.46□□□□□ -1.7
CHD9-201ENST00000219084 A0A1W2PQ67 120 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 MGRN1O60291 552 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 FESP07332 822 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 PSMB9P28065 219 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 S100A3P33764 101 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 ASMTP46597 345 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 TBX4P57082 545 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 GMFBP60983 142 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 FOLH1Q04609 750 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 PRKG2Q13237 762 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 BLMHQ13867 455 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 TYSND1Q2T9J0 566 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 LSM12Q3MHD2 195 aaKnown RBP4.46□□□□□ -1.7
CHD9-201ENST00000219084 INTS6LQ5JSJ4 861 aaKnown RBP4.46□□□□□ -1.7
CHD9-201ENST00000219084 ADGRD1Q6QNK2 874 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 KCNT2Q6UVM3 1135 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 GLT6D1Q7Z4J2 308 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 ACOT1Q86TX2 421 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 NIPA2Q8N8Q9 360 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 SNIP1Q8TAD8 396 aaKnown RBP4.46□□□□□ -1.7
CHD9-201ENST00000219084 FIG4Q92562 907 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 NKD2Q969F2 451 aaPredicted RBP4.46□□□□□ -1.7
CHD9-201ENST00000219084 KLF6Q99612 283 aaPredicted RBP4.46□□□□□ -1.7
CHD9-201ENST00000219084 SEPT5Q99719 369 aaPredicted RBP4.46□□□□□ -1.7
CHD9-201ENST00000219084 FHDC1Q9C0D6 1143 aaPredicted RBP4.46□□□□□ -1.7
CHD9-201ENST00000219084 FNIP2Q9P278 1114 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 RWDD3Q9Y3V2 267 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 ARIH1Q9Y4X5 557 aaPredicted RBP4.46□□□□□ -1.7
CHD9-201ENST00000219084 GMEB1Q9Y692 573 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 PTCH2Q9Y6C5 1203 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 LOC110117498-PIK3R3F6TDL0 507 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 HS6ST1O60243 411 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 POLR2EP19388 210 aaKnown RBP4.46□□□□□ -1.7
CHD9-201ENST00000219084 STX4Q12846 297 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 CSHL1Q14406 222 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 LPIN1Q14693 890 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 PTPRNQ16849 979 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 CWF19L1Q69YN2 538 aaKnown RBP4.46□□□□□ -1.7
CHD9-201ENST00000219084 TRIM40Q6P9F5 258 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 MFSD7Q6UXD7 560 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 EIF3MQ7L2H7 374 aaKnown RBP4.46□□□□□ -1.7
CHD9-201ENST00000219084 RAB2BQ8WUD1 216 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 PIK3R3Q92569 461 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 TMEM159Q96B96 161 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 SGF29Q96ES7 293 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 RHOJQ9H4E5 214 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 S100A14Q9HCY8 104 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 EVPLQ92817 2033 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 SIPA1L3O60292 1781 aaPredicted RBP4.46□□□□□ -1.7
CHD9-201ENST00000219084 MATN2O00339 956 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 GNRH1P01148 92 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 RHOCP08134 193 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 CCNB1P14635 433 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 TCF4P15884 667 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 PSME3P61289 254 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 BTKQ06187 659 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 TRIM25Q14258 630 aaKnown RBP4.46□□□□□ -1.7
CHD9-201ENST00000219084 MILR1Q7Z6M3 343 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 PRELID2Q8N945 189 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 SOCS4Q8WXH5 440 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 DNAJC19Q96DA6 116 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 MCRS1Q96EZ8 462 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 PPP1R16AQ96I34 528 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 ZNF607Q96SK3 696 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 GRIP2Q9C0E4 1043 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 CDHR5Q9HBB8 845 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 NT5MQ9NPB1 228 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 NMRK2Q9NPI5 230 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 PADI4Q9UM07 663 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 PCDHGC3Q9UN70 934 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 SNX7Q9UNH6 387 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 DOCK2Q92608 1830 aa4.46□□□□□ -1.7
CHD9-201ENST00000219084 DLEC1Q9Y238 1755 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 SYNCRIPO60506 623 aaKnown RBP4.45□□□□□ -1.7
CHD9-201ENST00000219084 GCATO75600 419 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 AKAP5P24588 427 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 SSTR3P32745 418 aaPredicted RBP4.45□□□□□ -1.7
CHD9-201ENST00000219084 SHMT1P34896 483 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 TGFB2P61812 414 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 BNIP1Q12981 228 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 KLHL17Q6TDP4 642 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 FAM220AQ7Z4H9 259 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 IRF2BP2Q7Z5L9 587 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 CLNKQ7Z7G1 428 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 HIPK1Q86Z02 1210 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 REPS2Q8NFH8 660 aa4.45□□□□□ -1.7
CHD9-201ENST00000219084 C15orf40Q8WUR7 153 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms