RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 BIRC5O15392 142 aa17.44■□□□□ 0.38
RABGGTA-201ENST00000216840 TIMM44O43615 452 aa17.44■□□□□ 0.38
RABGGTA-201ENST00000216840 VAPBO95292 243 aa17.44■□□□□ 0.38
RABGGTA-201ENST00000216840 IL1BP01584 269 aa17.44■□□□□ 0.38
RABGGTA-201ENST00000216840 BPGMP07738 259 aa17.44■□□□□ 0.38
RABGGTA-201ENST00000216840 LINC00271P0C7V0 271 aa17.44■□□□□ 0.38
RABGGTA-201ENST00000216840 MAGEA9P43362 315 aa17.44■□□□□ 0.38
RABGGTA-201ENST00000216840 SCTRP47872 440 aa17.44■□□□□ 0.38
RABGGTA-201ENST00000216840 SERPINH1P50454 418 aaKnown RBP17.44■□□□□ 0.38
RABGGTA-201ENST00000216840 MSLNQ13421 630 aaPredicted RBP17.44■□□□□ 0.38
RABGGTA-201ENST00000216840 N4BP2L1Q5TBK1 243 aaPredicted RBP17.44■□□□□ 0.38
RABGGTA-201ENST00000216840 ARMC3Q5W041 872 aa17.44■□□□□ 0.38
RABGGTA-201ENST00000216840 C16orf46Q6P387 395 aa17.44■□□□□ 0.38
RABGGTA-201ENST00000216840 CNTN4Q8IWV2 1026 aa17.44■□□□□ 0.38
RABGGTA-201ENST00000216840 TRIM42Q8IWZ5 723 aa17.44■□□□□ 0.38
RABGGTA-201ENST00000216840 ATP2A3Q93084 1043 aa17.44■□□□□ 0.38
RABGGTA-201ENST00000216840 ZFRQ96KR1 1074 aaKnown RBP17.44■□□□□ 0.38
RABGGTA-201ENST00000216840 SEMA3CQ99985 751 aa17.44■□□□□ 0.38
RABGGTA-201ENST00000216840 POLR1EQ9GZS1 481 aaKnown RBP17.44■□□□□ 0.38
RABGGTA-201ENST00000216840 GJB3O75712 270 aa17.44■□□□□ 0.38
RABGGTA-201ENST00000216840 GSRP00390 522 aa17.44■□□□□ 0.38
RABGGTA-201ENST00000216840 MBL2P11226 248 aaPredicted RBP17.44■□□□□ 0.38
RABGGTA-201ENST00000216840 OVGP1Q12889 678 aa17.44■□□□□ 0.38
RABGGTA-201ENST00000216840 SEPT6Q14141 434 aa17.44■□□□□ 0.38
RABGGTA-201ENST00000216840 ZNF235Q14590 738 aa17.44■□□□□ 0.38
RABGGTA-201ENST00000216840 CNGA3Q16281 694 aa17.44■□□□□ 0.38
RABGGTA-201ENST00000216840 INSCQ1MX18 579 aa17.44■□□□□ 0.38
RABGGTA-201ENST00000216840 FYB2Q5VWT5 728 aa17.44■□□□□ 0.38
RABGGTA-201ENST00000216840 CHST9Q7L1S5 443 aa17.44■□□□□ 0.38
RABGGTA-201ENST00000216840 NUDCD3Q8IVD9 361 aa17.44■□□□□ 0.38
RABGGTA-201ENST00000216840 FITM2Q8N6M3 262 aa17.44■□□□□ 0.38
RABGGTA-201ENST00000216840 VPS39Q96JC1 886 aa17.44■□□□□ 0.38
RABGGTA-201ENST00000216840 RANBP9Q96S59 729 aa17.44■□□□□ 0.38
RABGGTA-201ENST00000216840 CYP2S1Q96SQ9 504 aa17.44■□□□□ 0.38
RABGGTA-201ENST00000216840 PRKD2Q9BZL6 878 aa17.44■□□□□ 0.38
RABGGTA-201ENST00000216840 IL21Q9HBE4 155 aa17.44■□□□□ 0.38
RABGGTA-201ENST00000216840 NPHS2Q9NP85 383 aa17.44■□□□□ 0.38
RABGGTA-201ENST00000216840 SMPD4Q9NXE4 827 aa17.44■□□□□ 0.38
RABGGTA-201ENST00000216840 USH1CQ9Y6N9 552 aa17.44■□□□□ 0.38
RABGGTA-201ENST00000216840 LOC285095A0A1B0GVY8 99 aa17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 ZBBXA8MT70 800 aa17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 TSPAN3O60637 253 aa17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 PLIN3O60664 434 aa17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 UBOX5O94941 541 aa17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 PRKCGP05129 697 aa17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 CNPP09543 421 aaKnown RBP17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 CTSAP10619 480 aa17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 CREMQ03060 361 aa17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 GALNTL6Q49A17 601 aa17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 CES4AQ5XG92 561 aa17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 IL31Q6EBC2 164 aa17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 KIAA0930Q6ICG6 404 aaPredicted RBP17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 ITIH5Q86UX2 942 aa17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 ACVR1CQ8NER5 493 aa17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 E2F7Q96AV8 911 aa17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 SLC22A12Q96S37 553 aa17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 TRPC7Q9HCX4 862 aa17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 STOML2Q9UJZ1 356 aa17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 SLC12A4Q9UP95 1085 aa17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 ACTL7AQ9Y615 435 aa17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 A0A1B0GVM2 712 aa17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 ILVBLA1L0T0 632 aa17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 HEATR9A2RTY3 570 aa17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 TCAF2A6NFQ2 919 aa17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 KDELR3O43731 214 aa17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 SIN3BO75182 1162 aa17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 RHOCP08134 193 aa17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 ATXN1LP0C7T5 689 aaKnown RBP17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 TROVE2P10155 538 aaKnown RBP eCLIP17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 HSPA8P11142 646 aaKnown RBP17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 GABRB3P28472 473 aa17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 GMPRP36959 345 aa17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 IRX4P78413 519 aa17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 HTRA4P83105 476 aaPredicted RBP17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 ZNF177Q13360 481 aaPredicted RBP17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 CHI3L2Q15782 390 aa17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 SIRPB2Q5JXA9 342 aa17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 ALG1LQ6GMV1 187 aa17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 ZC3HC1Q86WB0 502 aaKnown RBP17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 FIBCD1Q8N539 461 aa17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 RAB3IL1Q8TBN0 382 aa17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 GPR22Q99680 433 aa17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 DDX50Q9BQ39 737 aaKnown RBP17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 SPON2Q9BUD6 331 aa17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 RHOJQ9H4E5 214 aa17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 CAB39LQ9H9S4 337 aa17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 STK39Q9UEW8 545 aa17.43■□□□□ 0.38
RABGGTA-201ENST00000216840 TGM5O43548 720 aa17.42■□□□□ 0.38
RABGGTA-201ENST00000216840 AHSGP02765 367 aa17.42■□□□□ 0.38
RABGGTA-201ENST00000216840 MPOP05164 745 aa17.42■□□□□ 0.38
RABGGTA-201ENST00000216840 GSTA1P08263 222 aa17.42■□□□□ 0.38
RABGGTA-201ENST00000216840 PAMP19021 973 aa17.42■□□□□ 0.38
RABGGTA-201ENST00000216840 GLDCP23378 1020 aa17.42■□□□□ 0.38
RABGGTA-201ENST00000216840 CA8P35219 290 aa17.42■□□□□ 0.38
RABGGTA-201ENST00000216840 OXCT1P55809 520 aa17.42■□□□□ 0.38
RABGGTA-201ENST00000216840 SMAD3P84022 425 aaKnown RBP17.42■□□□□ 0.38
RABGGTA-201ENST00000216840 BST1Q10588 318 aa17.42■□□□□ 0.38
RABGGTA-201ENST00000216840 GRM3Q14832 879 aa17.42■□□□□ 0.38
RABGGTA-201ENST00000216840 ATG16L1Q676U5 607 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms