RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 NR2C2P49116 596 aa13.74□□□□□ -0.21
TGFBR3-201ENST00000212355 TSNQ15631 228 aaKnown RBP13.74□□□□□ -0.21
TGFBR3-201ENST00000212355 ARHGAP22Q7Z5H3 698 aa13.74□□□□□ -0.21
TGFBR3-201ENST00000212355 NRDE2Q9H7Z3 1164 aa13.74□□□□□ -0.21
TGFBR3-201ENST00000212355 DGKBQ9Y6T7 804 aa13.74□□□□□ -0.21
TGFBR3-201ENST00000212355 ACKR2O00590 384 aa13.74□□□□□ -0.21
TGFBR3-201ENST00000212355 PAICSP22234 425 aaKnown RBP13.74□□□□□ -0.21
TGFBR3-201ENST00000212355 SPIDRQ14159 915 aa13.74□□□□□ -0.21
TGFBR3-201ENST00000212355 MYBPC2Q14324 1141 aa13.74□□□□□ -0.21
TGFBR3-201ENST00000212355 ZNF697Q5TEC3 545 aa13.74□□□□□ -0.21
TGFBR3-201ENST00000212355 OTOP3Q7RTS5 596 aa13.74□□□□□ -0.21
TGFBR3-201ENST00000212355 TUBGCP4Q9UGJ1 667 aa13.74□□□□□ -0.21
TGFBR3-201ENST00000212355 ZBTB14O43829 449 aa13.74□□□□□ -0.21
TGFBR3-201ENST00000212355 PPM1JQ5JR12 505 aa13.74□□□□□ -0.21
TGFBR3-201ENST00000212355 NEPROQ6NW34 567 aa13.74□□□□□ -0.21
TGFBR3-201ENST00000212355 POMZP3Q6PJE2 187 aa13.74□□□□□ -0.21
TGFBR3-201ENST00000212355 PARGQ86W56 976 aa13.74□□□□□ -0.21
TGFBR3-201ENST00000212355 RALGPS2Q86X27 583 aaPredicted RBP13.74□□□□□ -0.21
TGFBR3-201ENST00000212355 DNERQ8NFT8 737 aa13.74□□□□□ -0.21
TGFBR3-201ENST00000212355 ZNF671Q8TAW3 534 aa13.74□□□□□ -0.21
TGFBR3-201ENST00000212355 CERS2Q96G23 380 aa13.74□□□□□ -0.21
TGFBR3-201ENST00000212355 NAT9Q9BTE0 207 aa13.74□□□□□ -0.21
TGFBR3-201ENST00000212355 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.74□□□□□ -0.211e-7■■■■□ 23.1
TGFBR3-201ENST00000212355 SNTNA6NMZ2 147 aa13.74□□□□□ -0.21
TGFBR3-201ENST00000212355 TAF4O00268 1085 aa13.74□□□□□ -0.21
TGFBR3-201ENST00000212355 ALADP13716 330 aa13.74□□□□□ -0.21
TGFBR3-201ENST00000212355 GSTM5P46439 218 aa13.74□□□□□ -0.21
TGFBR3-201ENST00000212355 SH3RF1Q7Z6J0 888 aa13.74□□□□□ -0.21
TGFBR3-201ENST00000212355 ARL8BQ9NVJ2 186 aa13.74□□□□□ -0.21
TGFBR3-201ENST00000212355 ANAPC2Q9UJX6 822 aa13.74□□□□□ -0.21
TGFBR3-201ENST00000212355 FCGR1AP12314 374 aa13.74□□□□□ -0.21
TGFBR3-201ENST00000212355 SRSF11Q05519 484 aaKnown RBP13.74□□□□□ -0.21
TGFBR3-201ENST00000212355 FRG1Q14331 258 aaKnown RBP13.74□□□□□ -0.21
TGFBR3-201ENST00000212355 DLG2Q15700 870 aa13.74□□□□□ -0.21
TGFBR3-201ENST00000212355 CDK20Q8IZL9 346 aa13.74□□□□□ -0.21
TGFBR3-201ENST00000212355 UCMAQ8WVF2 138 aa13.74□□□□□ -0.21
TGFBR3-201ENST00000212355 LPIN3Q9BQK8 851 aa13.74□□□□□ -0.21
TGFBR3-201ENST00000212355 MRPS26Q9BYN8 205 aaKnown RBP13.74□□□□□ -0.21
TGFBR3-201ENST00000212355 MTIF3Q9H2K0 278 aaKnown RBP13.74□□□□□ -0.21
TGFBR3-201ENST00000212355 ANKRD6Q9Y2G4 727 aa13.74□□□□□ -0.21
TGFBR3-201ENST00000212355 LRCH1Q9Y2L9 728 aa13.74□□□□□ -0.21
TGFBR3-201ENST00000212355 POLR3HQ9Y535 204 aaPredicted RBP13.74□□□□□ -0.21
TGFBR3-201ENST00000212355 TIPRLO75663 272 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 CYP1A2P05177 515 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 DRD4P21917 467 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 CHN2P52757 468 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 GCNT1Q02742 428 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 OSCP1Q8WVF1 389 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 PROX1Q92786 737 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 AHCYL2Q96HN2 611 aaKnown RBP13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 APOL4Q9BPW4 351 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 RIMS1Q86UR5 1692 aaKnown RBP13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 TRBV23OR9-2A0A075B6M9 112 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 MAPTP10636 758 aaKnown RBP13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 EFNA1P20827 205 aaPredicted RBP13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 MPSTP25325 297 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 IL2P60568 153 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 CPSF6Q16630 551 aaKnown RBP eCLIP13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 PARP6Q2NL67 630 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 R3HCC1LQ7Z5L2 792 aaKnown RBP13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 CDH24Q86UP0 819 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 MCOLN3Q8TDD5 553 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 FBXO44Q9H4M3 255 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 ZNF222Q9UK12 451 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 IGSF6O95976 241 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 IFNA14P01570 189 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 LTA4HP09960 611 aaKnown RBP13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 NUP62P37198 522 aaPredicted RBP13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 COL9A2Q14055 689 aaPredicted RBP13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 NR1D2Q14995 579 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 PYDC2Q56P42 97 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 APTXQ7Z2E3 356 aaKnown RBP13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 PROSER1Q86XN7 944 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 SERPINB11Q96P15 392 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 PORCNQ9H237 461 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 TRMT13Q9NUP7 481 aaKnown RBP13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 CD84Q9UIB8 345 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 TK2O00142 265 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 FARP2O94887 1054 aaPredicted RBP13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 FOLH1Q04609 750 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 LPIN1Q14693 890 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 CRTC3Q6UUV7 619 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 CIR1Q86X95 450 aaPredicted RBP13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 FAM20CQ8IXL6 584 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 ZNF540Q8NDQ6 660 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 UGT2B28Q9BY64 529 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 POLR1EQ9GZS1 481 aaKnown RBP13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 STN1Q9H668 368 aaKnown RBP13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 REEP1Q9H902 201 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 REXO2Q9Y3B8 237 aaKnown RBP13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 SIGLEC16A6NMB1 481 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 PRR5-ARHGAP8B1AHC4 643 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 SMIM10L2AP0DMW4 78 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 SMIM10L2BP0DMW5 78 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 HGFP14210 728 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 HPCAL1P37235 193 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 ARHGAP8P85298 464 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 SEMG2Q02383 582 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 CAPSQ13938 189 aa13.73□□□□□ -0.21
TGFBR3-201ENST00000212355 ZNF460Q14592 562 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms